RNA–Protein interactions for RNA: ENST00000598209.5

UPF1-205, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 4

Gene UPF1, Length 551 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-205ENST00000598209 DACH1Q9UI36 760 aa14.74□□□□□ -0.05
UPF1-205ENST00000598209 TRIOO75962 3097 aa14.74□□□□□ -0.05
UPF1-205ENST00000598209 PATJQ8NI35 1801 aa14.73□□□□□ -0.05
UPF1-205ENST00000598209 F8VP50 259 aa14.73□□□□□ -0.05
UPF1-205ENST00000598209 PMM2O15305 246 aa14.73□□□□□ -0.05
UPF1-205ENST00000598209 CILPO75339 1184 aa14.73□□□□□ -0.05
UPF1-205ENST00000598209 ECI2O75521 394 aa14.73□□□□□ -0.05
UPF1-205ENST00000598209 F11P03951 625 aa14.73□□□□□ -0.05
UPF1-205ENST00000598209 SRFP11831 508 aa14.73□□□□□ -0.05
UPF1-205ENST00000598209 TRIM21P19474 475 aaKnown RBP14.73□□□□□ -0.05
UPF1-205ENST00000598209 FCARP24071 287 aa14.73□□□□□ -0.05
UPF1-205ENST00000598209 CACNA2D1P54289 1103 aa14.73□□□□□ -0.05
UPF1-205ENST00000598209 KCNH2Q12809 1159 aa14.73□□□□□ -0.05
UPF1-205ENST00000598209 TPD52L1Q16890 204 aaPredicted RBP14.73□□□□□ -0.05
UPF1-205ENST00000598209 GPR158Q5T848 1215 aa14.73□□□□□ -0.05
UPF1-205ENST00000598209 RBM43Q6ZSC3 357 aaKnown RBP14.73□□□□□ -0.05
UPF1-205ENST00000598209 HFE2Q6ZVN8 426 aa14.73□□□□□ -0.05
UPF1-205ENST00000598209 TMEM150AQ86TG1 271 aa14.73□□□□□ -0.05
UPF1-205ENST00000598209 FAM35AQ86V20 835 aa14.73□□□□□ -0.05
UPF1-205ENST00000598209 WHAMMQ8TF30 809 aa14.73□□□□□ -0.05
UPF1-205ENST00000598209 SMARCD2Q92925 531 aa14.73□□□□□ -0.05
UPF1-205ENST00000598209 ELSPBP1Q96BH3 223 aa14.73□□□□□ -0.05
UPF1-205ENST00000598209 TRMT2BQ96GJ1 504 aaKnown RBP14.73□□□□□ -0.05
UPF1-205ENST00000598209 CNOT6LQ96LI5 555 aaKnown RBP14.73□□□□□ -0.05
UPF1-205ENST00000598209 C8orf48Q96LL4 319 aa14.73□□□□□ -0.05
UPF1-205ENST00000598209 CEP295NLQ96MC4 621 aa14.73□□□□□ -0.05
UPF1-205ENST00000598209 ARID3AQ99856 593 aa14.73□□□□□ -0.05
UPF1-205ENST00000598209 NT5C1AQ9BXI3 368 aa14.73□□□□□ -0.05
UPF1-205ENST00000598209 PLA2G2FQ9BZM2 168 aa14.73□□□□□ -0.05
UPF1-205ENST00000598209 ZFP14Q9HCL3 533 aa14.73□□□□□ -0.05
UPF1-205ENST00000598209 TMEM30AQ9NV96 361 aa14.73□□□□□ -0.05
UPF1-205ENST00000598209 UXTQ9UBK9 157 aaPredicted RBP14.73□□□□□ -0.05
UPF1-205ENST00000598209 UTP18Q9Y5J1 556 aaKnown RBP eCLIP14.73□□□□□ -0.05
UPF1-205ENST00000598209 P4HA2O15460 535 aa14.72□□□□□ -0.05
UPF1-205ENST00000598209 AFPP02771 609 aaKnown RBP14.72□□□□□ -0.05
UPF1-205ENST00000598209 CFHP08603 1231 aa14.72□□□□□ -0.05
UPF1-205ENST00000598209 CCDC130P13994 396 aa14.72□□□□□ -0.05
UPF1-205ENST00000598209 ERCC5P28715 1186 aaPredicted RBP14.72□□□□□ -0.05
UPF1-205ENST00000598209 CETN1Q12798 172 aa14.72□□□□□ -0.05
UPF1-205ENST00000598209 LRMPQ12912 555 aa14.72□□□□□ -0.05
UPF1-205ENST00000598209 DENND5BQ6ZUT9 1274 aa14.72□□□□□ -0.05
UPF1-205ENST00000598209 PAQR9Q6ZVX9 377 aa14.72□□□□□ -0.05
UPF1-205ENST00000598209 CREBRFQ8IUR6 639 aa14.72□□□□□ -0.05
UPF1-205ENST00000598209 FUKQ8N0W3 1084 aa14.72□□□□□ -0.05
UPF1-205ENST00000598209 TTC39CQ8N584 583 aa14.72□□□□□ -0.05
UPF1-205ENST00000598209 C12orf29Q8N999 325 aa14.72□□□□□ -0.05
UPF1-205ENST00000598209 SMARCD1Q96GM5 515 aa14.72□□□□□ -0.05
UPF1-205ENST00000598209 MYRFLQ96LU7 910 aa14.72□□□□□ -0.05
UPF1-205ENST00000598209 TASP1Q9H6P5 420 aa14.72□□□□□ -0.05
UPF1-205ENST00000598209 TRPV4Q9HBA0 871 aa14.72□□□□□ -0.05
UPF1-205ENST00000598209 CISHQ9NSE2 258 aa14.72□□□□□ -0.05
UPF1-205ENST00000598209 FAM49BQ9NUQ9 324 aa14.72□□□□□ -0.05
UPF1-205ENST00000598209 FBXL21Q9UKT6 434 aa14.72□□□□□ -0.05
UPF1-205ENST00000598209 MYO16Q9Y6X6 1858 aa14.72□□□□□ -0.05
UPF1-205ENST00000598209 HELZP42694 1942 aaKnown RBP14.71□□□□□ -0.05
UPF1-205ENST00000598209 TADA3O75528 432 aa14.71□□□□□ -0.05
UPF1-205ENST00000598209 VIPR2P41587 438 aa14.71□□□□□ -0.05
UPF1-205ENST00000598209 GPC5P78333 572 aa14.71□□□□□ -0.05
UPF1-205ENST00000598209 CUL2Q13617 745 aa14.71□□□□□ -0.05
UPF1-205ENST00000598209 ZNF394Q53GI3 561 aa14.71□□□□□ -0.05
UPF1-205ENST00000598209 BMP8AQ7Z5Y6 402 aa14.71□□□□□ -0.05
UPF1-205ENST00000598209 IRF2BP1Q8IU81 584 aa14.71□□□□□ -0.05
UPF1-205ENST00000598209 ARID3BQ8IVW6 561 aaPredicted RBP14.71□□□□□ -0.05
UPF1-205ENST00000598209 SLC2A14Q8TDB8 520 aa14.71□□□□□ -0.05
UPF1-205ENST00000598209 MRPS31Q92665 395 aaKnown RBP14.71□□□□□ -0.05
UPF1-205ENST00000598209 PBXIP1Q96AQ6 731 aa14.71□□□□□ -0.05
UPF1-205ENST00000598209 NT5C1BQ96P26 610 aa14.71□□□□□ -0.05
UPF1-205ENST00000598209 DNAI2Q9GZS0 605 aa14.71□□□□□ -0.05
UPF1-205ENST00000598209 FAM124BQ9H5Z6 455 aaPredicted RBP14.71□□□□□ -0.05
UPF1-205ENST00000598209 SLC2A4RGQ9NR83 387 aa14.71□□□□□ -0.05
UPF1-205ENST00000598209 KRT82Q9NSB4 513 aa14.71□□□□□ -0.05
UPF1-205ENST00000598209 TICRRQ7Z2Z1 1910 aa14.7□□□□□ -0.06
UPF1-205ENST00000598209 KMT2EQ8IZD2 1858 aa14.7□□□□□ -0.06
UPF1-205ENST00000598209 AP1G2O75843 785 aa14.7□□□□□ -0.06
UPF1-205ENST00000598209 PDGFBP01127 241 aaPredicted RBP14.7□□□□□ -0.06
UPF1-205ENST00000598209 TBXAS1P24557 533 aaPredicted RBP14.7□□□□□ -0.06
UPF1-205ENST00000598209 DDX6P26196 483 aaKnown RBP eCLIP14.7□□□□□ -0.06
UPF1-205ENST00000598209 ADORA2BP29275 332 aa14.7□□□□□ -0.06
UPF1-205ENST00000598209 USP46P62068 366 aa14.7□□□□□ -0.06
UPF1-205ENST00000598209 YWHAEP62258 255 aaKnown RBP14.7□□□□□ -0.06
UPF1-205ENST00000598209 CT47A1Q5JQC4 288 aaPredicted RBP14.7□□□□□ -0.06
UPF1-205ENST00000598209 CCDC183Q5T5S1 534 aa14.7□□□□□ -0.06
UPF1-205ENST00000598209 VITQ6UXI7 678 aa14.7□□□□□ -0.06
UPF1-205ENST00000598209 GPIHBP1Q8IV16 184 aa14.7□□□□□ -0.06
UPF1-205ENST00000598209 MAB21L3Q8N8X9 362 aa14.7□□□□□ -0.06
UPF1-205ENST00000598209 LMO3Q8TAP4 145 aa14.7□□□□□ -0.06
UPF1-205ENST00000598209 E2F7Q96AV8 911 aa14.7□□□□□ -0.06
UPF1-205ENST00000598209 CYFIP2Q96F07 1278 aa14.7□□□□□ -0.06
UPF1-205ENST00000598209 KCNK16Q96T55 309 aa14.7□□□□□ -0.06
UPF1-205ENST00000598209 HNRNPABQ99729 332 aaKnown RBP14.7□□□□□ -0.06
UPF1-205ENST00000598209 TTLL2Q9BWV7 592 aa14.7□□□□□ -0.06
UPF1-205ENST00000598209 SLC46A2Q9BY10 475 aa14.7□□□□□ -0.06
UPF1-205ENST00000598209 THAP9Q9H5L6 903 aa14.7□□□□□ -0.06
UPF1-205ENST00000598209 DMAP1Q9NPF5 467 aaPredicted RBP14.7□□□□□ -0.06
UPF1-205ENST00000598209 EHD2Q9NZN4 543 aa14.7□□□□□ -0.06
UPF1-205ENST00000598209 WNT16Q9UBV4 365 aa14.7□□□□□ -0.06
UPF1-205ENST00000598209 ZMYM5Q9UJ78 669 aa14.7□□□□□ -0.06
UPF1-205ENST00000598209 KIF26AQ9ULI4 1882 aaPredicted RBP14.69□□□□□ -0.06
UPF1-205ENST00000598209 NCANO14594 1321 aa14.69□□□□□ -0.06
UPF1-205ENST00000598209 HEPACAM2A8MVW5 462 aa14.69□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms