RNA–Protein interactions for RNA: ENST00000598108.5

IRF3-220, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 1,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-220ENST00000598108 MYRFLQ96LU7 910 aa24.27■■□□□ 1.48
IRF3-220ENST00000598108 TRPV4Q9HBA0 871 aa24.27■■□□□ 1.48
IRF3-220ENST00000598108 SLC2A4RGQ9NR83 387 aa24.27■■□□□ 1.48
IRF3-220ENST00000598108 FBXL21Q9UKT6 434 aa24.27■■□□□ 1.48
IRF3-220ENST00000598108 NCANO14594 1321 aa24.27■■□□□ 1.48
IRF3-220ENST00000598108 CD58P19256 250 aa24.26■■□□□ 1.47
IRF3-220ENST00000598108 FMO5P49326 533 aa24.26■■□□□ 1.47
IRF3-220ENST00000598108 ARID3BQ8IVW6 561 aaPredicted RBP24.26■■□□□ 1.47
IRF3-220ENST00000598108 C12orf29Q8N999 325 aa24.26■■□□□ 1.47
IRF3-220ENST00000598108 ARID3AQ99856 593 aa24.26■■□□□ 1.47
IRF3-220ENST00000598108 SLC46A2Q9BY10 475 aa24.26■■□□□ 1.47
IRF3-220ENST00000598108 TASP1Q9H6P5 420 aa24.26■■□□□ 1.47
IRF3-220ENST00000598108 WNT16Q9UBV4 365 aa24.26■■□□□ 1.47
IRF3-220ENST00000598108 KRBA1A5PL33 1030 aa24.25■■□□□ 1.47
IRF3-220ENST00000598108 TADA3O75528 432 aa24.25■■□□□ 1.47
IRF3-220ENST00000598108 COL9A1P20849 921 aa24.25■■□□□ 1.47
IRF3-220ENST00000598108 USP46P62068 366 aa24.25■■□□□ 1.47
IRF3-220ENST00000598108 GRM2Q14416 872 aa24.25■■□□□ 1.47
IRF3-220ENST00000598108 DPCR1Q3MIW9 517 aa24.25■■□□□ 1.47
IRF3-220ENST00000598108 WDR44Q5JSH3 913 aa24.25■■□□□ 1.47
IRF3-220ENST00000598108 VITQ6UXI7 678 aa24.25■■□□□ 1.47
IRF3-220ENST00000598108 TRIM59Q8IWR1 403 aa24.25■■□□□ 1.47
IRF3-220ENST00000598108 FUKQ8N0W3 1084 aa24.25■■□□□ 1.47
IRF3-220ENST00000598108 SIX5Q8N196 739 aa24.25■■□□□ 1.47
IRF3-220ENST00000598108 FBXL6Q8N531 539 aa24.25■■□□□ 1.47
IRF3-220ENST00000598108 TRMT2BQ96GJ1 504 aaKnown RBP24.25■■□□□ 1.47
IRF3-220ENST00000598108 C8orf48Q96LL4 319 aa24.25■■□□□ 1.47
IRF3-220ENST00000598108 LRRC3BQ96PB8 259 aa24.25■■□□□ 1.47
IRF3-220ENST00000598108 GCNAQ96QF7 691 aa24.25■■□□□ 1.47
IRF3-220ENST00000598108 KCNK16Q96T55 309 aa24.25■■□□□ 1.47
IRF3-220ENST00000598108 ELOVL4Q9GZR5 314 aa24.25■■□□□ 1.47
IRF3-220ENST00000598108 TRIM66O15016 1216 aa24.24■■□□□ 1.47
IRF3-220ENST00000598108 CILPO75339 1184 aa24.24■■□□□ 1.47
IRF3-220ENST00000598108 GNA14O95837 355 aa24.24■■□□□ 1.47
IRF3-220ENST00000598108 CCDC130P13994 396 aa24.24■■□□□ 1.47
IRF3-220ENST00000598108 NPR3P17342 541 aa24.24■■□□□ 1.47
IRF3-220ENST00000598108 MARSP56192 900 aaKnown RBP24.24■■□□□ 1.47
IRF3-220ENST00000598108 ARHGAP15Q53QZ3 475 aa24.24■■□□□ 1.47
IRF3-220ENST00000598108 TXNDC8Q6A555 127 aa24.24■■□□□ 1.47
IRF3-220ENST00000598108 FAM35AQ86V20 835 aa24.24■■□□□ 1.47
IRF3-220ENST00000598108 MED10Q9BTT4 135 aa24.24■■□□□ 1.47
IRF3-220ENST00000598108 CA14Q9ULX7 337 aa24.24■■□□□ 1.47
IRF3-220ENST00000598108 HEPACAM2A8MVW5 462 aa24.23■■□□□ 1.47
IRF3-220ENST00000598108 PMM2O15305 246 aa24.23■■□□□ 1.47
IRF3-220ENST00000598108 ANXA13P27216 316 aa24.23■■□□□ 1.47
IRF3-220ENST00000598108 DENND5BQ6ZUT9 1274 aa24.23■■□□□ 1.47
IRF3-220ENST00000598108 IRF2BP1Q8IU81 584 aa24.23■■□□□ 1.47
IRF3-220ENST00000598108 SLC2A14Q8TDB8 520 aa24.23■■□□□ 1.47
IRF3-220ENST00000598108 FAXDC2Q96IV6 333 aa24.23■■□□□ 1.47
IRF3-220ENST00000598108 CEP295NLQ96MC4 621 aa24.23■■□□□ 1.47
IRF3-220ENST00000598108 NT5C1AQ9BXI3 368 aa24.23■■□□□ 1.47
IRF3-220ENST00000598108 SMG9Q9H0W8 520 aaKnown RBP24.23■■□□□ 1.47
IRF3-220ENST00000598108 CISHQ9NSE2 258 aa24.23■■□□□ 1.47
IRF3-220ENST00000598108 FAM49BQ9NUQ9 324 aa24.23■■□□□ 1.47
IRF3-220ENST00000598108 UXTQ9UBK9 157 aaPredicted RBP24.23■■□□□ 1.47
IRF3-220ENST00000598108 GOLGA6L22H0YM25 854 aa24.22■■□□□ 1.47
IRF3-220ENST00000598108 PRAMEF12O95522 483 aa24.22■■□□□ 1.47
IRF3-220ENST00000598108 VCPP55072 806 aaKnown RBP24.22■■□□□ 1.47
IRF3-220ENST00000598108 LRMPQ12912 555 aa24.22■■□□□ 1.47
IRF3-220ENST00000598108 ZNF394Q53GI3 561 aa24.22■■□□□ 1.47
IRF3-220ENST00000598108 MAB21L3Q8N8X9 362 aa24.22■■□□□ 1.47
IRF3-220ENST00000598108 LMO3Q8TAP4 145 aa24.22■■□□□ 1.47
IRF3-220ENST00000598108 BEST1O76090 585 aa24.21■■□□□ 1.47
IRF3-220ENST00000598108 FGFR1OPO95684 399 aaKnown RBP24.21■■□□□ 1.47
IRF3-220ENST00000598108 WEE1P30291 646 aa24.21■■□□□ 1.47
IRF3-220ENST00000598108 KCNH2Q12809 1159 aa24.21■■□□□ 1.47
IRF3-220ENST00000598108 MON1AQ86VX9 555 aa24.21■■□□□ 1.47
IRF3-220ENST00000598108 MFSD6LQ8IWD5 586 aa24.21■■□□□ 1.47
IRF3-220ENST00000598108 ZMIZ2Q8NF64 920 aa24.21■■□□□ 1.47
IRF3-220ENST00000598108 MRPS31Q92665 395 aaKnown RBP24.21■■□□□ 1.47
IRF3-220ENST00000598108 SMOQ99835 787 aa24.21■■□□□ 1.47
IRF3-220ENST00000598108 TRMT61BQ9BVS5 477 aaKnown RBP24.21■■□□□ 1.47
IRF3-220ENST00000598108 TTLL2Q9BWV7 592 aa24.21■■□□□ 1.47
IRF3-220ENST00000598108 KRT82Q9NSB4 513 aa24.21■■□□□ 1.47
IRF3-220ENST00000598108 UTP18Q9Y5J1 556 aaKnown RBP eCLIP24.21■■□□□ 1.477e-6■■■■■ 33.3
IRF3-220ENST00000598108 ZDBF2Q9HCK1 2354 aa24.21■■□□□ 1.47
IRF3-220ENST00000598108 AP1G2O75843 785 aa24.2■■□□□ 1.46
IRF3-220ENST00000598108 CCDC192P0DO97 292 aa24.2■■□□□ 1.46
IRF3-220ENST00000598108 PSMC3P17980 439 aa24.2■■□□□ 1.46
IRF3-220ENST00000598108 CUL2Q13617 745 aa24.2■■□□□ 1.46
IRF3-220ENST00000598108 SLC44A4Q53GD3 710 aa24.2■■□□□ 1.46
IRF3-220ENST00000598108 CWF19L1Q69YN2 538 aaKnown RBP24.2■■□□□ 1.46
IRF3-220ENST00000598108 SUGP1Q8IWZ8 645 aaKnown RBP24.2■■□□□ 1.46
IRF3-220ENST00000598108 CMTM8Q8IZV2 173 aa24.2■■□□□ 1.46
IRF3-220ENST00000598108 SMARCD1Q96GM5 515 aa24.2■■□□□ 1.46
IRF3-220ENST00000598108 SLC22A12Q96S37 553 aa24.2■■□□□ 1.46
IRF3-220ENST00000598108 HNRNPABQ99729 332 aaKnown RBP24.2■■□□□ 1.46
IRF3-220ENST00000598108 MFSD1Q9H3U5 465 aa24.2■■□□□ 1.46
IRF3-220ENST00000598108 ARHGEF3Q9NR81 526 aa24.2■■□□□ 1.46
IRF3-220ENST00000598108 ATP8B3O60423 1300 aa24.19■■□□□ 1.46
IRF3-220ENST00000598108 TNFRSF10BO14763 440 aa24.19■■□□□ 1.46
IRF3-220ENST00000598108 DDX6P26196 483 aaKnown RBP eCLIP24.19■■□□□ 1.46
IRF3-220ENST00000598108 ADORA2BP29275 332 aa24.19■■□□□ 1.46
IRF3-220ENST00000598108 AVPR2P30518 371 aa24.19■■□□□ 1.46
IRF3-220ENST00000598108 GDI1P31150 447 aa24.19■■□□□ 1.46
IRF3-220ENST00000598108 RAD23BP54727 409 aa24.19■■□□□ 1.46
IRF3-220ENST00000598108 RBM43Q6ZSC3 357 aaKnown RBP24.19■■□□□ 1.46
IRF3-220ENST00000598108 CREBRFQ8IUR6 639 aa24.19■■□□□ 1.46
IRF3-220ENST00000598108 NUP93Q8N1F7 819 aa24.19■■□□□ 1.46
IRF3-220ENST00000598108 SLC4A11Q8NBS3 891 aa24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms