RNA–Protein interactions for RNA: ENST00000595803.5

SHKBP1-209, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-209ENST00000595803 ACBD6Q9BR61 282 aa13.83□□□□□ -0.2
SHKBP1-209ENST00000595803 MED10Q9BTT4 135 aa13.83□□□□□ -0.2
SHKBP1-209ENST00000595803 AAASQ9NRG9 546 aa13.83□□□□□ -0.2
SHKBP1-209ENST00000595803 FAM49BQ9NUQ9 324 aa13.83□□□□□ -0.2
SHKBP1-209ENST00000595803 LMCD1Q9NZU5 365 aa13.83□□□□□ -0.2
SHKBP1-209ENST00000595803 HCSTQ9UBK5 93 aa13.83□□□□□ -0.2
SHKBP1-209ENST00000595803 TRIM10Q9UDY6 481 aa13.83□□□□□ -0.2
SHKBP1-209ENST00000595803 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.83□□□□□ -0.2
SHKBP1-209ENST00000595803 ATP8B3O60423 1300 aa13.83□□□□□ -0.2
SHKBP1-209ENST00000595803 MYO15AQ9UKN7 3530 aa13.82□□□□□ -0.2
SHKBP1-209ENST00000595803 GRXCR2A6NFK2 248 aa13.82□□□□□ -0.2
SHKBP1-209ENST00000595803 BTNL10A8MVZ5 291 aa13.82□□□□□ -0.2
SHKBP1-209ENST00000595803 M0QYV0 167 aa13.82□□□□□ -0.2
SHKBP1-209ENST00000595803 ATP2C2O75185 946 aa13.82□□□□□ -0.2
SHKBP1-209ENST00000595803 ABL1P00519 1130 aa13.82□□□□□ -0.2
SHKBP1-209ENST00000595803 MYBL1P10243 752 aa13.82□□□□□ -0.2
SHKBP1-209ENST00000595803 TNNT1P13805 278 aa13.82□□□□□ -0.2
SHKBP1-209ENST00000595803 LAG3P18627 525 aa13.82□□□□□ -0.2
SHKBP1-209ENST00000595803 ADORA2BP29275 332 aa13.82□□□□□ -0.2
SHKBP1-209ENST00000595803 GNG11P61952 73 aa13.82□□□□□ -0.2
SHKBP1-209ENST00000595803 CENPCQ03188 943 aa13.82□□□□□ -0.2
SHKBP1-209ENST00000595803 IFI16Q16666 785 aaKnown RBP13.82□□□□□ -0.2
SHKBP1-209ENST00000595803 GOLGA7BQ2TAP0 167 aa13.82□□□□□ -0.2
SHKBP1-209ENST00000595803 ZNF569Q5MCW4 686 aa13.82□□□□□ -0.2
SHKBP1-209ENST00000595803 FUT10Q6P4F1 479 aa13.82□□□□□ -0.2
SHKBP1-209ENST00000595803 KCNT2Q6UVM3 1135 aa13.82□□□□□ -0.2
SHKBP1-209ENST00000595803 ERICH1Q86X53 443 aa13.82□□□□□ -0.2
SHKBP1-209ENST00000595803 PHF13Q86YI8 300 aaPredicted RBP13.82□□□□□ -0.2
SHKBP1-209ENST00000595803 HERC6Q8IVU3 1022 aa13.82□□□□□ -0.2
SHKBP1-209ENST00000595803 MCOLN2Q8IZK6 566 aa13.82□□□□□ -0.2
SHKBP1-209ENST00000595803 B3GALNT2Q8NCR0 500 aa13.82□□□□□ -0.2
SHKBP1-209ENST00000595803 MSANTD4Q8NCY6 345 aa13.82□□□□□ -0.2
SHKBP1-209ENST00000595803 PHOSPHO2Q8TCD6 241 aa13.82□□□□□ -0.2
SHKBP1-209ENST00000595803 SECISBP2LQ93073 1101 aaKnown RBP13.82□□□□□ -0.2
SHKBP1-209ENST00000595803 VCPIP1Q96JH7 1222 aa13.82□□□□□ -0.2
SHKBP1-209ENST00000595803 C16orf45Q96MC5 204 aaPredicted RBP13.82□□□□□ -0.2
SHKBP1-209ENST00000595803 ZNF558Q96NG5 402 aa13.82□□□□□ -0.2
SHKBP1-209ENST00000595803 NOX5Q96PH1 765 aa13.82□□□□□ -0.2
SHKBP1-209ENST00000595803 LPIN3Q9BQK8 851 aa13.82□□□□□ -0.2
SHKBP1-209ENST00000595803 THAP2Q9H0W7 228 aa13.82□□□□□ -0.2
SHKBP1-209ENST00000595803 MARCH5Q9NX47 278 aa13.82□□□□□ -0.2
SHKBP1-209ENST00000595803 ADAM22Q9P0K1 906 aa13.82□□□□□ -0.2
SHKBP1-209ENST00000595803 MYO1AQ9UBC5 1043 aa13.82□□□□□ -0.2
SHKBP1-209ENST00000595803 TSPAN16Q9UKR8 245 aa13.82□□□□□ -0.2
SHKBP1-209ENST00000595803 INSL6Q9Y581 213 aa13.82□□□□□ -0.2
SHKBP1-209ENST00000595803 DUSP10Q9Y6W6 482 aa13.82□□□□□ -0.2
SHKBP1-209ENST00000595803 SF3B1O75533 1304 aaKnown RBP eCLIP13.82□□□□□ -0.2
SHKBP1-209ENST00000595803 FNDC1Q4ZHG4 1894 aaPredicted RBP13.82□□□□□ -0.2
SHKBP1-209ENST00000595803 MACROD2A1Z1Q3 448 aa13.81□□□□□ -0.2
SHKBP1-209ENST00000595803 CALB1P05937 261 aa13.81□□□□□ -0.2
SHKBP1-209ENST00000595803 TKTP29401 623 aaKnown RBP13.81□□□□□ -0.2
SHKBP1-209ENST00000595803 CDH5P33151 784 aaPredicted RBP13.81□□□□□ -0.2
SHKBP1-209ENST00000595803 SLC8A3P57103 927 aa13.81□□□□□ -0.2
SHKBP1-209ENST00000595803 SNX16P57768 344 aa13.81□□□□□ -0.2
SHKBP1-209ENST00000595803 PSMC1P62191 440 aaKnown RBP13.81□□□□□ -0.2
SHKBP1-209ENST00000595803 TSPY1Q01534 308 aa13.81□□□□□ -0.2
SHKBP1-209ENST00000595803 ZP2Q05996 745 aa13.81□□□□□ -0.2
SHKBP1-209ENST00000595803 TCF15Q12870 199 aa13.81□□□□□ -0.2
SHKBP1-209ENST00000595803 MDH1BQ5I0G3 518 aa13.81□□□□□ -0.2
SHKBP1-209ENST00000595803 IER5LQ5T953 404 aa13.81□□□□□ -0.2
SHKBP1-209ENST00000595803 NYAP1Q6ZVC0 841 aa13.81□□□□□ -0.2
SHKBP1-209ENST00000595803 FIBCD1Q8N539 461 aa13.81□□□□□ -0.2
SHKBP1-209ENST00000595803 WDTC1Q8N5D0 677 aa13.81□□□□□ -0.2
SHKBP1-209ENST00000595803 ANKRD52Q8NB46 1076 aa13.81□□□□□ -0.2
SHKBP1-209ENST00000595803 C1orf131Q8NDD1 294 aaKnown RBP13.81□□□□□ -0.2
SHKBP1-209ENST00000595803 ZNF653Q96CK0 615 aa13.81□□□□□ -0.2
SHKBP1-209ENST00000595803 HNRNPABQ99729 332 aaKnown RBP13.81□□□□□ -0.2
SHKBP1-209ENST00000595803 GPR62Q9BZJ7 368 aa13.81□□□□□ -0.2
SHKBP1-209ENST00000595803 CNOT8Q9UFF9 292 aaKnown RBP13.81□□□□□ -0.2
SHKBP1-209ENST00000595803 MRPL42Q9Y6G3 142 aaKnown RBP13.81□□□□□ -0.2
SHKBP1-209ENST00000595803 A0A0A6YYK5 440 aaPredicted RBP13.8□□□□□ -0.2
SHKBP1-209ENST00000595803 MYBPHLA2RUH7 354 aa13.8□□□□□ -0.2
SHKBP1-209ENST00000595803 H7C4K7 107 aa13.8□□□□□ -0.2
SHKBP1-209ENST00000595803 BUB1O43683 1085 aa13.8□□□□□ -0.2
SHKBP1-209ENST00000595803 OAZ2O95190 189 aa13.8□□□□□ -0.2
SHKBP1-209ENST00000595803 GJB5O95377 273 aa13.8□□□□□ -0.2
SHKBP1-209ENST00000595803 MOCS3O95396 460 aa13.8□□□□□ -0.2
SHKBP1-209ENST00000595803 SETSIPP0DME0 302 aa13.8□□□□□ -0.2
SHKBP1-209ENST00000595803 CCDC130P13994 396 aa13.8□□□□□ -0.2
SHKBP1-209ENST00000595803 FGFR3P22607 806 aa13.8□□□□□ -0.2
SHKBP1-209ENST00000595803 PBX3P40426 434 aa13.8□□□□□ -0.2
SHKBP1-209ENST00000595803 GPD2P43304 727 aa13.8□□□□□ -0.2
SHKBP1-209ENST00000595803 ETF1P62495 437 aaKnown RBP13.8□□□□□ -0.2
SHKBP1-209ENST00000595803 C1QBPQ07021 282 aaKnown RBP13.8□□□□□ -0.2
SHKBP1-209ENST00000595803 MAPRE1Q15691 268 aaKnown RBP13.8□□□□□ -0.2
SHKBP1-209ENST00000595803 INTS6LQ5JSJ4 861 aaKnown RBP13.8□□□□□ -0.2
SHKBP1-209ENST00000595803 VARS2Q5ST30 1063 aaKnown RBP13.8□□□□□ -0.2
SHKBP1-209ENST00000595803 KIAA0319Q5VV43 1072 aa13.8□□□□□ -0.2
SHKBP1-209ENST00000595803 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.8□□□□□ -0.2
SHKBP1-209ENST00000595803 MMS22LQ6ZRQ5 1243 aa13.8□□□□□ -0.2
SHKBP1-209ENST00000595803 RHOT2Q8IXI1 618 aa13.8□□□□□ -0.2
SHKBP1-209ENST00000595803 DCP1BQ8IZD4 617 aaKnown RBP13.8□□□□□ -0.2
SHKBP1-209ENST00000595803 SLC35G2Q8TBE7 412 aa13.8□□□□□ -0.2
SHKBP1-209ENST00000595803 MYCBPAPQ8TBZ2 947 aa13.8□□□□□ -0.2
SHKBP1-209ENST00000595803 SLC2A14Q8TDB8 520 aa13.8□□□□□ -0.2
SHKBP1-209ENST00000595803 ZNF592Q92610 1267 aa13.8□□□□□ -0.2
SHKBP1-209ENST00000595803 IGSF21Q96ID5 467 aa13.8□□□□□ -0.2
SHKBP1-209ENST00000595803 CALR3Q96L12 384 aaKnown RBP13.8□□□□□ -0.2
SHKBP1-209ENST00000595803 RTP3Q9BQQ7 232 aa13.8□□□□□ -0.2
SHKBP1-209ENST00000595803 C11orf70Q9BRQ4 267 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms