RNA–Protein interactions for RNA: ENST00000592333.1

CCDC43-205, Transcript of coiled-coil domain containing 43, humanhuman

TSL 2

Gene CCDC43, Length 692 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-205ENST00000592333 HRO43593 1189 aa20.17■□□□□ 0.82
CCDC43-205ENST00000592333 TADA3O75528 432 aa20.17■□□□□ 0.82
CCDC43-205ENST00000592333 ATICP31939 592 aa20.17■□□□□ 0.82
CCDC43-205ENST00000592333 MTF1Q14872 753 aa20.17■□□□□ 0.82
CCDC43-205ENST00000592333 CPA6Q8N4T0 437 aa20.17■□□□□ 0.82
CCDC43-205ENST00000592333 CAMKK1Q8N5S9 505 aa20.17■□□□□ 0.82
CCDC43-205ENST00000592333 GLIS3Q8NEA6 775 aa20.17■□□□□ 0.82
CCDC43-205ENST00000592333 TTC8Q8TAM2 541 aa20.17■□□□□ 0.82
CCDC43-205ENST00000592333 MYCBPAPQ8TBZ2 947 aa20.17■□□□□ 0.82
CCDC43-205ENST00000592333 OSCP1Q8WVF1 389 aa20.17■□□□□ 0.82
CCDC43-205ENST00000592333 ATP2A3Q93084 1043 aa20.17■□□□□ 0.82
CCDC43-205ENST00000592333 CGRRF1Q99675 332 aa20.17■□□□□ 0.82
CCDC43-205ENST00000592333 RTKNQ9BST9 563 aa20.17■□□□□ 0.82
CCDC43-205ENST00000592333 EBF3Q9H4W6 596 aa20.17■□□□□ 0.82
CCDC43-205ENST00000592333 FOXD4L1Q9NU39 408 aa20.17■□□□□ 0.82
CCDC43-205ENST00000592333 FAM13BQ9NYF5 915 aa20.17■□□□□ 0.82
CCDC43-205ENST00000592333 CFAP45Q9UL16 551 aa20.17■□□□□ 0.82
CCDC43-205ENST00000592333 TRIM66O15016 1216 aa20.16■□□□□ 0.82
CCDC43-205ENST00000592333 AKAP3O75969 853 aa20.16■□□□□ 0.82
CCDC43-205ENST00000592333 TNNI1P19237 187 aa20.16■□□□□ 0.82
CCDC43-205ENST00000592333 LMO2P25791 158 aa20.16■□□□□ 0.82
CCDC43-205ENST00000592333 FNTBP49356 437 aa20.16■□□□□ 0.82
CCDC43-205ENST00000592333 CDR1P51861 262 aa20.16■□□□□ 0.82
CCDC43-205ENST00000592333 AP3M2P53677 418 aa20.16■□□□□ 0.82
CCDC43-205ENST00000592333 NOP14P78316 857 aaKnown RBP20.16■□□□□ 0.82
CCDC43-205ENST00000592333 CYP24A1Q07973 514 aa20.16■□□□□ 0.82
CCDC43-205ENST00000592333 USP4Q13107 963 aa20.16■□□□□ 0.82
CCDC43-205ENST00000592333 NR1H3Q13133 447 aa20.16■□□□□ 0.82
CCDC43-205ENST00000592333 ZNF77Q15935 545 aa20.16■□□□□ 0.82
CCDC43-205ENST00000592333 SDHAF4Q5VUM1 108 aa20.16■□□□□ 0.82
CCDC43-205ENST00000592333 LMBRD2Q68DH5 695 aaPredicted RBP20.16■□□□□ 0.82
CCDC43-205ENST00000592333 SCARA3Q6AZY7 606 aa20.16■□□□□ 0.82
CCDC43-205ENST00000592333 DENND5BQ6ZUT9 1274 aa20.16■□□□□ 0.82
CCDC43-205ENST00000592333 SCN4BQ8IWT1 228 aa20.16■□□□□ 0.82
CCDC43-205ENST00000592333 GOLGA5Q8TBA6 731 aa20.16■□□□□ 0.82
CCDC43-205ENST00000592333 SCFD1Q8WVM8 642 aa20.16■□□□□ 0.82
CCDC43-205ENST00000592333 HPS3Q969F9 1004 aa20.16■□□□□ 0.82
CCDC43-205ENST00000592333 LOXL4Q96JB6 756 aa20.16■□□□□ 0.82
CCDC43-205ENST00000592333 C8orf48Q96LL4 319 aa20.16■□□□□ 0.82
CCDC43-205ENST00000592333 TTLL2Q9BWV7 592 aa20.16■□□□□ 0.82
CCDC43-205ENST00000592333 CRTAC1Q9NQ79 661 aa20.16■□□□□ 0.82
CCDC43-205ENST00000592333 GCNT4Q9P109 453 aa20.16■□□□□ 0.82
CCDC43-205ENST00000592333 ARHGAP26Q9UNA1 814 aa20.16■□□□□ 0.82
CCDC43-205ENST00000592333 POLR2DO15514 142 aaKnown RBP20.15■□□□□ 0.82
CCDC43-205ENST00000592333 CKMP06732 381 aa20.15■□□□□ 0.82
CCDC43-205ENST00000592333 ZSCAN22P10073 491 aaPredicted RBP20.15■□□□□ 0.82
CCDC43-205ENST00000592333 ANXA13P27216 316 aa20.15■□□□□ 0.82
CCDC43-205ENST00000592333 GNL1P36915 607 aaPredicted RBP20.15■□□□□ 0.82
CCDC43-205ENST00000592333 KCNB1Q14721 858 aa20.15■□□□□ 0.82
CCDC43-205ENST00000592333 CSRP2Q16527 193 aa20.15■□□□□ 0.82
CCDC43-205ENST00000592333 FSTL4Q6MZW2 842 aa20.15■□□□□ 0.82
CCDC43-205ENST00000592333 PRR23BQ6ZRT6 265 aa20.15■□□□□ 0.82
CCDC43-205ENST00000592333 MYLPFQ96A32 169 aa20.15■□□□□ 0.82
CCDC43-205ENST00000592333 CHFRQ96EP1 664 aa20.15■□□□□ 0.82
CCDC43-205ENST00000592333 MMS19Q96T76 1030 aa20.15■□□□□ 0.82
CCDC43-205ENST00000592333 ECT2Q9H8V3 914 aa20.15■□□□□ 0.82
CCDC43-205ENST00000592333 VRTNQ9H8Y1 702 aa20.15■□□□□ 0.82
CCDC43-205ENST00000592333 DUS2Q9NX74 493 aaKnown RBP20.15■□□□□ 0.82
CCDC43-205ENST00000592333 CDV3Q9UKY7 258 aaKnown RBP20.15■□□□□ 0.82
CCDC43-205ENST00000592333 USP18Q9UMW8 372 aa20.15■□□□□ 0.82
CCDC43-205ENST00000592333 ZNF638Q14966 1978 aaKnown RBP20.15■□□□□ 0.82
CCDC43-205ENST00000592333 OTOL1A6NHN0 477 aaPredicted RBP20.14■□□□□ 0.81
CCDC43-205ENST00000592333 F13A1P00488 732 aa20.14■□□□□ 0.81
CCDC43-205ENST00000592333 CST3P01034 146 aaPredicted RBP20.14■□□□□ 0.81
CCDC43-205ENST00000592333 DLATP10515 647 aaKnown RBP20.14■□□□□ 0.81
CCDC43-205ENST00000592333 HDCP19113 662 aa20.14■□□□□ 0.81
CCDC43-205ENST00000592333 GJA4P35212 333 aa20.14■□□□□ 0.81
CCDC43-205ENST00000592333 GRIK1P39086 918 aa20.14■□□□□ 0.81
CCDC43-205ENST00000592333 KNOP1Q1ED39 458 aaKnown RBP20.14■□□□□ 0.81
CCDC43-205ENST00000592333 RESP18Q5W5W9 173 aa20.14■□□□□ 0.81
CCDC43-205ENST00000592333 TRIM68Q6AZZ1 485 aa20.14■□□□□ 0.81
CCDC43-205ENST00000592333 SYAP1Q96A49 352 aaPredicted RBP20.14■□□□□ 0.81
CCDC43-205ENST00000592333 PCED1BQ96HM7 432 aa20.14■□□□□ 0.81
CCDC43-205ENST00000592333 P2RY13Q9BPV8 354 aa20.14■□□□□ 0.81
CCDC43-205ENST00000592333 SNX25Q9H3E2 840 aa20.14■□□□□ 0.81
CCDC43-205ENST00000592333 TRPM5Q9NZQ8 1165 aa20.14■□□□□ 0.81
CCDC43-205ENST00000592333 SLC8A2Q9UPR5 921 aa20.14■□□□□ 0.81
CCDC43-205ENST00000592333 ATP2C2O75185 946 aa20.13■□□□□ 0.81
CCDC43-205ENST00000592333 BDNFP23560 247 aa20.13■□□□□ 0.81
CCDC43-205ENST00000592333 IFNAR2P48551 515 aa20.13■□□□□ 0.81
CCDC43-205ENST00000592333 GALK1P51570 392 aa20.13■□□□□ 0.81
CCDC43-205ENST00000592333 ATXN1P54253 815 aaKnown RBP20.13■□□□□ 0.81
CCDC43-205ENST00000592333 TNNC1P63316 161 aa20.13■□□□□ 0.81
CCDC43-205ENST00000592333 DMWDQ09019 674 aa20.13■□□□□ 0.81
CCDC43-205ENST00000592333 PSMD2Q13200 908 aa20.13■□□□□ 0.81
CCDC43-205ENST00000592333 WDR72Q3MJ13 1102 aa20.13■□□□□ 0.81
CCDC43-205ENST00000592333 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.13■□□□□ 0.81
CCDC43-205ENST00000592333 HSCBQ8IWL3 235 aa20.13■□□□□ 0.81
CCDC43-205ENST00000592333 RDH13Q8NBN7 331 aa20.13■□□□□ 0.81
CCDC43-205ENST00000592333 NETO1Q8TDF5 533 aa20.13■□□□□ 0.81
CCDC43-205ENST00000592333 FAM84AQ96KN4 292 aa20.13■□□□□ 0.81
CCDC43-205ENST00000592333 CYP2S1Q96SQ9 504 aa20.13■□□□□ 0.81
CCDC43-205ENST00000592333 ELOVL4Q9GZR5 314 aa20.13■□□□□ 0.81
CCDC43-205ENST00000592333 TRPC7Q9HCX4 862 aa20.13■□□□□ 0.81
CCDC43-205ENST00000592333 PARD6AQ9NPB6 346 aa20.13■□□□□ 0.81
CCDC43-205ENST00000592333 PCDHA7Q9UN72 937 aa20.13■□□□□ 0.81
CCDC43-205ENST00000592333 HCRTO43612 131 aa20.12■□□□□ 0.81
CCDC43-205ENST00000592333 MYL1P05976 194 aa20.12■□□□□ 0.81
CCDC43-205ENST00000592333 HSP90AA1P07900 732 aaKnown RBP20.12■□□□□ 0.81
CCDC43-205ENST00000592333 PDGFRBP09619 1106 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms