RNA–Protein interactions for RNA: ENST00000589934.1

APBA3-204, Transcript of amyloid beta precursor protein binding family A member 3, human

TSL 2

Gene APBA3, Length 725 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APBA3-204	ENST00000589934	PDE4C	Q08493	712 aa		13.99	□□□□□ -0.17
APBA3-204	ENST00000589934	SMC1A	Q14683	1233 aa	Known RBP	13.99	□□□□□ -0.17
APBA3-204	ENST00000589934	NFE2	Q16621	373 aa	Predicted RBP	13.99	□□□□□ -0.17
APBA3-204	ENST00000589934	TSR1	Q2NL82	804 aa	Known RBP	13.99	□□□□□ -0.17
APBA3-204	ENST00000589934	GOLGA7B	Q2TAP0	167 aa		13.99	□□□□□ -0.17
APBA3-204	ENST00000589934	TDRD12	Q587J7	1177 aa	Known RBP	13.99	□□□□□ -0.17
APBA3-204	ENST00000589934	TPGS2	Q68CL5	300 aa		13.99	□□□□□ -0.17
APBA3-204	ENST00000589934	CLEC20A	Q6ZU45	233 aa		13.99	□□□□□ -0.17
APBA3-204	ENST00000589934	CCDC112	Q8NEF3	446 aa		13.99	□□□□□ -0.17
APBA3-204	ENST00000589934	UBA3	Q8TBC4	463 aa		13.99	□□□□□ -0.17
APBA3-204	ENST00000589934	GDPD5	Q8WTR4	605 aa		13.99	□□□□□ -0.17
APBA3-204	ENST00000589934	STK32A	Q8WU08	396 aa		13.99	□□□□□ -0.17
APBA3-204	ENST00000589934	C2orf15	Q8WU43	125 aa	Known RBP	13.99	□□□□□ -0.17
APBA3-204	ENST00000589934	SLC22A17	Q8WUG5	538 aa		13.99	□□□□□ -0.17
APBA3-204	ENST00000589934	UBXN6	Q9BZV1	441 aa		13.99	□□□□□ -0.17
APBA3-204	ENST00000589934	HSFX1	Q9UBD0	423 aa		13.99	□□□□□ -0.17
APBA3-204	ENST00000589934	AFF4	Q9UHB7	1163 aa	Known RBP	13.99	□□□□□ -0.17
APBA3-204	ENST00000589934	EPN1	Q9Y6I3	576 aa	Predicted RBP	13.99	□□□□□ -0.17
APBA3-204	ENST00000589934	EIF3CL	B5ME19	914 aa	Known RBP	13.98	□□□□□ -0.17
APBA3-204	ENST00000589934	TNFRSF10B	O14763	440 aa		13.98	□□□□□ -0.17
APBA3-204	ENST00000589934	HAPLN1	P10915	354 aa	Predicted RBP	13.98	□□□□□ -0.17
APBA3-204	ENST00000589934	NPR3	P17342	541 aa		13.98	□□□□□ -0.17
APBA3-204	ENST00000589934	TNFAIP3	P21580	790 aa		13.98	□□□□□ -0.17
APBA3-204	ENST00000589934	BDNF	P23560	247 aa		13.98	□□□□□ -0.17
APBA3-204	ENST00000589934	CYP2F1	P24903	491 aa		13.98	□□□□□ -0.17
APBA3-204	ENST00000589934	ADORA2B	P29275	332 aa		13.98	□□□□□ -0.17
APBA3-204	ENST00000589934	CREM	Q03060	361 aa		13.98	□□□□□ -0.17
APBA3-204	ENST00000589934	GFPT1	Q06210	699 aa	Predicted RBP	13.98	□□□□□ -0.17
APBA3-204	ENST00000589934	KCNC3	Q14003	757 aa		13.98	□□□□□ -0.17
APBA3-204	ENST00000589934	PLPP4	Q5VZY2	271 aa		13.98	□□□□□ -0.17
APBA3-204	ENST00000589934	ACAD10	Q6JQN1	1059 aa		13.98	□□□□□ -0.17
APBA3-204	ENST00000589934	PMF1	Q6P1K2	205 aa		13.98	□□□□□ -0.17
APBA3-204	ENST00000589934	TRIM72	Q6ZMU5	477 aa		13.98	□□□□□ -0.17
APBA3-204	ENST00000589934	TMEM110	Q86TL2	294 aa		13.98	□□□□□ -0.17
APBA3-204	ENST00000589934	DNAAF5	Q86Y56	855 aa		13.98	□□□□□ -0.17
APBA3-204	ENST00000589934	PHF13	Q86YI8	300 aa	Predicted RBP	13.98	□□□□□ -0.17
APBA3-204	ENST00000589934	SECISBP2L	Q93073	1101 aa	Known RBP	13.98	□□□□□ -0.17
APBA3-204	ENST00000589934	CCDC42	Q96M95	316 aa		13.98	□□□□□ -0.17
APBA3-204	ENST00000589934	PGLYRP2	Q96PD5	576 aa		13.98	□□□□□ -0.17
APBA3-204	ENST00000589934	KCNK16	Q96T55	309 aa		13.98	□□□□□ -0.17
APBA3-204	ENST00000589934	EIF3C	Q99613	913 aa	Known RBP	13.98	□□□□□ -0.17
APBA3-204	ENST00000589934	SLC4A5	Q9BY07	1137 aa		13.98	□□□□□ -0.17
APBA3-204	ENST00000589934	SPTLC3	Q9NUV7	552 aa		13.98	□□□□□ -0.17
APBA3-204	ENST00000589934	MAFF	Q9ULX9	164 aa		13.98	□□□□□ -0.17
APBA3-204	ENST00000589934	PCDHB5	Q9Y5E4	795 aa		13.98	□□□□□ -0.17
APBA3-204	ENST00000589934	COL4A4	P53420	1690 aa	Predicted RBP	13.98	□□□□□ -0.17
APBA3-204	ENST00000589934	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	13.97	□□□□□ -0.17
APBA3-204	ENST00000589934	TCRBV5S1A1T	A0A578	114 aa		13.97	□□□□□ -0.17
APBA3-204	ENST00000589934	XPO1	O14980	1071 aa	Known RBP	13.97	□□□□□ -0.17
APBA3-204	ENST00000589934	ARHGAP6	O43182	974 aa		13.97	□□□□□ -0.17
APBA3-204	ENST00000589934	TGM5	O43548	720 aa		13.97	□□□□□ -0.17
APBA3-204	ENST00000589934	CLASP2	O75122	1294 aa	Known RBP	13.97	□□□□□ -0.17
APBA3-204	ENST00000589934	NDUFA10	O95299	355 aa		13.97	□□□□□ -0.17
APBA3-204	ENST00000589934	PAPLN	O95428	1278 aa		13.97	□□□□□ -0.17
APBA3-204	ENST00000589934	SETSIP	P0DME0	302 aa		13.97	□□□□□ -0.17
APBA3-204	ENST00000589934	POU3F3	P20264	500 aa	Predicted RBP	13.97	□□□□□ -0.17
APBA3-204	ENST00000589934	MMP8	P22894	467 aa		13.97	□□□□□ -0.17
APBA3-204	ENST00000589934	PLA2G4A	P47712	749 aa		13.97	□□□□□ -0.17
APBA3-204	ENST00000589934	CLCN4	P51793	760 aa		13.97	□□□□□ -0.17
APBA3-204	ENST00000589934	BCAT1	P54687	386 aa		13.97	□□□□□ -0.17
APBA3-204	ENST00000589934	ARPP19	P56211	112 aa		13.97	□□□□□ -0.17
APBA3-204	ENST00000589934	CYP27A1	Q02318	531 aa		13.97	□□□□□ -0.17
APBA3-204	ENST00000589934	ADCY1	Q08828	1119 aa		13.97	□□□□□ -0.17
APBA3-204	ENST00000589934	BST2	Q10589	180 aa	Known RBP	13.97	□□□□□ -0.17
APBA3-204	ENST00000589934	DUSP4	Q13115	394 aa		13.97	□□□□□ -0.17
APBA3-204	ENST00000589934	RAB41	Q5JT25	222 aa		13.97	□□□□□ -0.17
APBA3-204	ENST00000589934	NAA35	Q5VZE5	725 aa		13.97	□□□□□ -0.17
APBA3-204	ENST00000589934	VSTM1	Q6UX27	236 aa		13.97	□□□□□ -0.17
APBA3-204	ENST00000589934	C4orf50	Q6ZRC1	276 aa		13.97	□□□□□ -0.17
APBA3-204	ENST00000589934	TOGARAM2	Q6ZUX3	1019 aa		13.97	□□□□□ -0.17
APBA3-204	ENST00000589934	MON1B	Q7L1V2	547 aa		13.97	□□□□□ -0.17
APBA3-204	ENST00000589934	ADGRD2	Q7Z7M1	963 aa		13.97	□□□□□ -0.17
APBA3-204	ENST00000589934	PASD1	Q8IV76	773 aa		13.97	□□□□□ -0.17
APBA3-204	ENST00000589934	TCEAL8	Q8IYN2	117 aa		13.97	□□□□□ -0.17
APBA3-204	ENST00000589934	C1orf131	Q8NDD1	294 aa	Known RBP	13.97	□□□□□ -0.17
APBA3-204	ENST00000589934	SPPL2B	Q8TCT7	592 aa		13.97	□□□□□ -0.17
APBA3-204	ENST00000589934	CPA5	Q8WXQ8	436 aa		13.97	□□□□□ -0.17
APBA3-204	ENST00000589934	KCTD13	Q8WZ19	329 aa		13.97	□□□□□ -0.17
APBA3-204	ENST00000589934	MRPL38	Q96DV4	380 aa	Known RBP	13.97	□□□□□ -0.17
APBA3-204	ENST00000589934	SMARCD1	Q96GM5	515 aa		13.97	□□□□□ -0.17
APBA3-204	ENST00000589934	C8orf48	Q96LL4	319 aa		13.97	□□□□□ -0.17
APBA3-204	ENST00000589934	DNAI2	Q9GZS0	605 aa		13.97	□□□□□ -0.17
APBA3-204	ENST00000589934	ENTPD7	Q9NQZ7	604 aa		13.97	□□□□□ -0.17
APBA3-204	ENST00000589934	KRT82	Q9NSB4	513 aa		13.97	□□□□□ -0.17
APBA3-204	ENST00000589934	IL37	Q9NZH6	218 aa		13.97	□□□□□ -0.17
APBA3-204	ENST00000589934	TJP2	Q9UDY2	1190 aa		13.97	□□□□□ -0.17
APBA3-204	ENST00000589934		M0QYV0	167 aa		13.96	□□□□□ -0.17
APBA3-204	ENST00000589934	AP1G2	O75843	785 aa		13.96	□□□□□ -0.17
APBA3-204	ENST00000589934	FAM200B	P0CF97	657 aa		13.96	□□□□□ -0.17
APBA3-204	ENST00000589934	CPB1	P15086	417 aa		13.96	□□□□□ -0.17
APBA3-204	ENST00000589934	GABRB2	P47870	512 aa		13.96	□□□□□ -0.17
APBA3-204	ENST00000589934	GPR15	P49685	360 aa		13.96	□□□□□ -0.17
APBA3-204	ENST00000589934	MAP3K7CL	P57077	242 aa		13.96	□□□□□ -0.17
APBA3-204	ENST00000589934	PDCL	Q13371	301 aa		13.96	□□□□□ -0.17
APBA3-204	ENST00000589934	GRIN2C	Q14957	1233 aa		13.96	□□□□□ -0.17
APBA3-204	ENST00000589934	PTPN20	Q4JDL3	420 aa		13.96	□□□□□ -0.17
APBA3-204	ENST00000589934	ALKBH5	Q6P6C2	394 aa	Known RBP	13.96	□□□□□ -0.17
APBA3-204	ENST00000589934	GPRIN1	Q7Z2K8	1008 aa		13.96	□□□□□ -0.17
APBA3-204	ENST00000589934	PIGZ	Q86VD9	579 aa		13.96	□□□□□ -0.17
APBA3-204	ENST00000589934	SPATA2L	Q8IUW3	424 aa	Predicted RBP	13.96	□□□□□ -0.17

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