RNA–Protein interactions for RNA: ENST00000589349.5

DNMT1-219, Transcript of DNA methyltransferase 1, humanhuman

TSL 4

Gene DNMT1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-219ENST00000589349 CNNM3Q8NE01 707 aa9.05□□□□□ -0.96
DNMT1-219ENST00000589349 SEC16BQ96JE7 1060 aa9.05□□□□□ -0.96
DNMT1-219ENST00000589349 RPGRIP1Q96KN7 1286 aa9.05□□□□□ -0.96
DNMT1-219ENST00000589349 GAD1Q99259 594 aa9.05□□□□□ -0.96
DNMT1-219ENST00000589349 ADPGKQ9BRR6 497 aa9.05□□□□□ -0.96
DNMT1-219ENST00000589349 POLR3CQ9BUI4 534 aaPredicted RBP9.05□□□□□ -0.96
DNMT1-219ENST00000589349 C1QTNF1Q9BXJ1 281 aa9.05□□□□□ -0.96
DNMT1-219ENST00000589349 C2orf40Q9H1Z8 148 aa9.05□□□□□ -0.96
DNMT1-219ENST00000589349 EPHX3Q9H6B9 360 aa9.05□□□□□ -0.96
DNMT1-219ENST00000589349 NRDE2Q9H7Z3 1164 aa9.05□□□□□ -0.96
DNMT1-219ENST00000589349 UBN1Q9NPG3 1134 aa9.05□□□□□ -0.96
DNMT1-219ENST00000589349 XPNPEP1Q9NQW7 623 aa9.05□□□□□ -0.96
DNMT1-219ENST00000589349 MBNL3Q9NUK0 354 aaKnown RBP9.05□□□□□ -0.96
DNMT1-219ENST00000589349 DNAJB4Q9UDY4 337 aa9.05□□□□□ -0.96
DNMT1-219ENST00000589349 DBR1Q9UK59 544 aaKnown RBP9.05□□□□□ -0.96
DNMT1-219ENST00000589349 IPPQ9Y573 584 aa9.05□□□□□ -0.96
DNMT1-219ENST00000589349 MYO7AQ13402 2215 aa9.04□□□□□ -0.96
DNMT1-219ENST00000589349 FSD2A1L4K1 749 aa9.04□□□□□ -0.96
DNMT1-219ENST00000589349 PP2D1A8MPX8 630 aa9.04□□□□□ -0.96
DNMT1-219ENST00000589349 MBTPS2O43462 519 aa9.04□□□□□ -0.96
DNMT1-219ENST00000589349 ZNF623O75123 536 aa9.04□□□□□ -0.96
DNMT1-219ENST00000589349 PRKCBP05771 671 aa9.04□□□□□ -0.96
DNMT1-219ENST00000589349 HSP90AA1P07900 732 aaKnown RBP9.04□□□□□ -0.96
DNMT1-219ENST00000589349 GALTP07902 379 aa9.04□□□□□ -0.96
DNMT1-219ENST00000589349 RNASE1P07998 156 aaKnown RBP9.04□□□□□ -0.96
DNMT1-219ENST00000589349 ARF4P18085 180 aaPredicted RBP9.04□□□□□ -0.96
DNMT1-219ENST00000589349 CYP11B2P19099 503 aa9.04□□□□□ -0.96
DNMT1-219ENST00000589349 U2AF2P26368 475 aaKnown RBP eCLIP9.04□□□□□ -0.962e-6■■■□□ 15.4
DNMT1-219ENST00000589349 KLRC2P26717 231 aa9.04□□□□□ -0.96
DNMT1-219ENST00000589349 TPP2P29144 1249 aaPredicted RBP9.04□□□□□ -0.96
DNMT1-219ENST00000589349 HOXA11P31270 313 aaPredicted RBP9.04□□□□□ -0.96
DNMT1-219ENST00000589349 LTBRP36941 435 aa9.04□□□□□ -0.96
DNMT1-219ENST00000589349 SLC11A1P49279 550 aa9.04□□□□□ -0.96
DNMT1-219ENST00000589349 MBTD1Q05BQ5 628 aa9.04□□□□□ -0.96
DNMT1-219ENST00000589349 DHX8Q14562 1220 aaKnown RBP9.04□□□□□ -0.96
DNMT1-219ENST00000589349 PPP2R5AQ15172 486 aa9.04□□□□□ -0.96
DNMT1-219ENST00000589349 DUSP6Q16828 381 aa9.04□□□□□ -0.96
DNMT1-219ENST00000589349 CLEC16AQ2KHT3 1053 aa9.04□□□□□ -0.96
DNMT1-219ENST00000589349 RILPL1Q5EBL4 403 aa9.04□□□□□ -0.96
DNMT1-219ENST00000589349 CES5AQ6NT32 575 aa9.04□□□□□ -0.96
DNMT1-219ENST00000589349 APBB1IPQ7Z5R6 666 aaPredicted RBP9.04□□□□□ -0.96
DNMT1-219ENST00000589349 TSPYL5Q86VY4 417 aaPredicted RBP9.04□□□□□ -0.96
DNMT1-219ENST00000589349 ZNF280BQ86YH2 543 aa9.04□□□□□ -0.96
DNMT1-219ENST00000589349 OR6P1Q8NGX9 317 aa9.04□□□□□ -0.96
DNMT1-219ENST00000589349 RABGGTAQ92696 567 aa9.04□□□□□ -0.96
DNMT1-219ENST00000589349 CCDC51Q96ER9 411 aa9.04□□□□□ -0.96
DNMT1-219ENST00000589349 CCDC120Q96HB5 630 aa9.04□□□□□ -0.96
DNMT1-219ENST00000589349 SLC6A18Q96N87 628 aa9.04□□□□□ -0.96
DNMT1-219ENST00000589349 CDCA3Q99618 268 aaPredicted RBP9.04□□□□□ -0.96
DNMT1-219ENST00000589349 TCHPQ9BT92 498 aa9.04□□□□□ -0.96
DNMT1-219ENST00000589349 KIFC3Q9BVG8 833 aa9.04□□□□□ -0.96
DNMT1-219ENST00000589349 CSRNP2Q9H175 543 aa9.04□□□□□ -0.96
DNMT1-219ENST00000589349 ZHX3Q9H4I2 956 aa9.04□□□□□ -0.96
DNMT1-219ENST00000589349 PRMT7Q9NVM4 692 aaPredicted RBP9.04□□□□□ -0.96
DNMT1-219ENST00000589349 STRIP2Q9ULQ0 834 aa9.04□□□□□ -0.96
DNMT1-219ENST00000589349 LZTS1Q9Y250 596 aa9.04□□□□□ -0.96
DNMT1-219ENST00000589349 GDAQ9Y2T3 454 aa9.04□□□□□ -0.96
DNMT1-219ENST00000589349 RALGAPA2Q2PPJ7 1873 aa9.04□□□□□ -0.96
DNMT1-219ENST00000589349 CNTNAP2Q9UHC6 1331 aa9.04□□□□□ -0.96
DNMT1-219ENST00000589349 ARL5CA6NH57 179 aa9.03□□□□□ -0.96
DNMT1-219ENST00000589349 E9PMD0 336 aa9.03□□□□□ -0.96
DNMT1-219ENST00000589349 K7ERI5 159 aa9.03□□□□□ -0.96
DNMT1-219ENST00000589349 BIN1O00499 593 aa9.03□□□□□ -0.96
DNMT1-219ENST00000589349 LAD1O00515 517 aa9.03□□□□□ -0.96
DNMT1-219ENST00000589349 N4BP3O15049 544 aa9.03□□□□□ -0.96
DNMT1-219ENST00000589349 TADA2AO75478 443 aa9.03□□□□□ -0.96
DNMT1-219ENST00000589349 KRT18P05783 430 aaKnown RBP9.03□□□□□ -0.96
DNMT1-219ENST00000589349 URODP06132 367 aa9.03□□□□□ -0.96
DNMT1-219ENST00000589349 HARSP12081 509 aaKnown RBP9.03□□□□□ -0.96
DNMT1-219ENST00000589349 ALADP13716 330 aa9.03□□□□□ -0.96
DNMT1-219ENST00000589349 NCLP19338 710 aaKnown RBP9.03□□□□□ -0.96
DNMT1-219ENST00000589349 GUCY2CP25092 1073 aa9.03□□□□□ -0.96
DNMT1-219ENST00000589349 NASPP49321 788 aaPredicted RBP9.03□□□□□ -0.96
DNMT1-219ENST00000589349 TOB1P50616 345 aaPredicted RBP9.03□□□□□ -0.96
DNMT1-219ENST00000589349 SCNN1GP51170 649 aa9.03□□□□□ -0.96
DNMT1-219ENST00000589349 PEX3P56589 373 aa9.03□□□□□ -0.96
DNMT1-219ENST00000589349 DMP1Q13316 513 aaPredicted RBP9.03□□□□□ -0.96
DNMT1-219ENST00000589349 PDIA5Q14554 519 aa9.03□□□□□ -0.96
DNMT1-219ENST00000589349 PCBP1Q15365 356 aaKnown RBP eCLIP9.03□□□□□ -0.96
DNMT1-219ENST00000589349 TMEM31Q5JXX7 168 aa9.03□□□□□ -0.96
DNMT1-219ENST00000589349 UBXN11Q5T124 520 aa9.03□□□□□ -0.96
DNMT1-219ENST00000589349 SLC27A1Q6PCB7 646 aa9.03□□□□□ -0.96
DNMT1-219ENST00000589349 CCDC81Q6ZN84 652 aa9.03□□□□□ -0.96
DNMT1-219ENST00000589349 CABP7Q86V35 215 aa9.03□□□□□ -0.96
DNMT1-219ENST00000589349 LSRQ86X29 649 aaPredicted RBP9.03□□□□□ -0.96
DNMT1-219ENST00000589349 ADHFE1Q8IWW8 467 aa9.03□□□□□ -0.96
DNMT1-219ENST00000589349 MRPL43Q8N983 215 aaKnown RBP9.03□□□□□ -0.96
DNMT1-219ENST00000589349 ENOX1Q8TC92 643 aaKnown RBP9.03□□□□□ -0.96
DNMT1-219ENST00000589349 KIFAP3Q92845 792 aa9.03□□□□□ -0.96
DNMT1-219ENST00000589349 CASP10Q92851 521 aa9.03□□□□□ -0.96
DNMT1-219ENST00000589349 IGSF21Q96ID5 467 aa9.03□□□□□ -0.96
DNMT1-219ENST00000589349 COLEC11Q9BWP8 271 aa9.03□□□□□ -0.96
DNMT1-219ENST00000589349 SRRTQ9BXP5 876 aaKnown RBP9.03□□□□□ -0.96
DNMT1-219ENST00000589349 NXF3Q9H4D5 531 aaKnown RBP9.03□□□□□ -0.96
DNMT1-219ENST00000589349 CAPN10Q9HC96 672 aa9.03□□□□□ -0.96
DNMT1-219ENST00000589349 CD320Q9NPF0 282 aa9.03□□□□□ -0.96
DNMT1-219ENST00000589349 MRPL17Q9NRX2 175 aaKnown RBP9.03□□□□□ -0.96
DNMT1-219ENST00000589349 DUSP13Q9UII6 198 aa9.03□□□□□ -0.96
DNMT1-219ENST00000589349 ADAMTS6Q9UKP5 1117 aa9.03□□□□□ -0.96
DNMT1-219ENST00000589349 USP15Q9Y4E8 981 aaPredicted RBP9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms