RNA–Protein interactions for RNA: ENST00000588411.5

CIRBP-219, Transcript of cold inducible RNA binding protein, humanhuman

TSL 5

Gene CIRBP, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-219ENST00000588411 COL4A3Q01955 1670 aa23.26■■□□□ 1.31
CIRBP-219ENST00000588411 A8MXQ7 604 aa23.26■■□□□ 1.31
CIRBP-219ENST00000588411 IKBKBO14920 756 aa23.26■■□□□ 1.31
CIRBP-219ENST00000588411 MAPK13O15264 365 aa23.26■■□□□ 1.31
CIRBP-219ENST00000588411 PTPN1P18031 435 aaKnown RBP23.26■■□□□ 1.31
CIRBP-219ENST00000588411 PDE6CP51160 858 aa23.26■■□□□ 1.31
CIRBP-219ENST00000588411 LRRC32Q14392 662 aa23.26■■□□□ 1.31
CIRBP-219ENST00000588411 ZNF268Q14587 947 aaPredicted RBP23.26■■□□□ 1.31
CIRBP-219ENST00000588411 PPP2R5DQ14738 602 aa23.26■■□□□ 1.31
CIRBP-219ENST00000588411 NFIL3Q16649 462 aa23.26■■□□□ 1.31
CIRBP-219ENST00000588411 TXNDC8Q6A555 127 aa23.26■■□□□ 1.31
CIRBP-219ENST00000588411 CC2D1AQ6P1N0 951 aaPredicted RBP23.26■■□□□ 1.31
CIRBP-219ENST00000588411 ASCL5Q7RTU5 278 aa23.26■■□□□ 1.31
CIRBP-219ENST00000588411 GUF1Q8N442 669 aaKnown RBP23.26■■□□□ 1.31
CIRBP-219ENST00000588411 LRRC3BQ96PB8 259 aa23.26■■□□□ 1.31
CIRBP-219ENST00000588411 ELOVL4Q9GZR5 314 aa23.26■■□□□ 1.31
CIRBP-219ENST00000588411 TRPC7Q9HCX4 862 aa23.26■■□□□ 1.31
CIRBP-219ENST00000588411 F5P12259 2224 aa23.26■■□□□ 1.31
CIRBP-219ENST00000588411 NUP210Q8TEM1 1887 aaPredicted RBP23.26■■□□□ 1.31
CIRBP-219ENST00000588411 ZFHX2Q9C0A1 2572 aaPredicted RBP23.25■■□□□ 1.31
CIRBP-219ENST00000588411 TRAV19A0A0A6YYK7 116 aa23.25■■□□□ 1.31
CIRBP-219ENST00000588411 SHISA7A6NL88 538 aa23.25■■□□□ 1.31
CIRBP-219ENST00000588411 C4BPAP04003 597 aaKnown RBP23.25■■□□□ 1.31
CIRBP-219ENST00000588411 NR2F2P24468 414 aa23.25■■□□□ 1.31
CIRBP-219ENST00000588411 SGSM1Q2NKQ1 1148 aa23.25■■□□□ 1.31
CIRBP-219ENST00000588411 DENND5BQ6ZUT9 1274 aa23.25■■□□□ 1.31
CIRBP-219ENST00000588411 B3GALNT2Q8NCR0 500 aa23.25■■□□□ 1.31
CIRBP-219ENST00000588411 TAF4BQ92750 862 aa23.25■■□□□ 1.31
CIRBP-219ENST00000588411 USP13Q92995 863 aaPredicted RBP23.25■■□□□ 1.31
CIRBP-219ENST00000588411 ZFYVE19Q96K21 471 aa23.25■■□□□ 1.31
CIRBP-219ENST00000588411 CHRDQ9H2X0 955 aa23.25■■□□□ 1.31
CIRBP-219ENST00000588411 LMAN1LQ9HAT1 526 aa23.25■■□□□ 1.31
CIRBP-219ENST00000588411 RMND1Q9NWS8 449 aa23.25■■□□□ 1.31
CIRBP-219ENST00000588411 ATP8B3O60423 1300 aa23.25■■□□□ 1.31
CIRBP-219ENST00000588411 SPECC1L-ADORA2AF8WAN1 911 aa23.24■■□□□ 1.31
CIRBP-219ENST00000588411 USP17L7P0C7H9 530 aa23.24■■□□□ 1.31
CIRBP-219ENST00000588411 KRT13P13646 458 aa23.24■■□□□ 1.31
CIRBP-219ENST00000588411 CSTF1Q05048 431 aaKnown RBP23.24■■□□□ 1.31
CIRBP-219ENST00000588411 ITPRIPL2Q3MIP1 535 aa23.24■■□□□ 1.31
CIRBP-219ENST00000588411 ZACNQ401N2 412 aa23.24■■□□□ 1.31
CIRBP-219ENST00000588411 INTS8Q75QN2 995 aaKnown RBP23.24■■□□□ 1.31
CIRBP-219ENST00000588411 ZNF687Q8N1G0 1237 aa23.24■■□□□ 1.31
CIRBP-219ENST00000588411 TNIP3Q96KP6 325 aa23.24■■□□□ 1.31
CIRBP-219ENST00000588411 C8orf48Q96LL4 319 aa23.24■■□□□ 1.31
CIRBP-219ENST00000588411 SMYD3Q9H7B4 428 aa23.24■■□□□ 1.31
CIRBP-219ENST00000588411 GTSE1Q9NYZ3 720 aa23.24■■□□□ 1.31
CIRBP-219ENST00000588411 MAPK8IP1Q9UQF2 711 aa23.24■■□□□ 1.31
CIRBP-219ENST00000588411 R4GN57 208 aa23.24■■□□□ 1.31
CIRBP-219ENST00000588411 TADA3O75528 432 aa23.23■■□□□ 1.31
CIRBP-219ENST00000588411 LMNAP02545 664 aaKnown RBP23.23■■□□□ 1.31
CIRBP-219ENST00000588411 CKMP06732 381 aa23.23■■□□□ 1.31
CIRBP-219ENST00000588411 TRIM21P19474 475 aaKnown RBP23.23■■□□□ 1.31
CIRBP-219ENST00000588411 CTHP32929 405 aa23.23■■□□□ 1.31
CIRBP-219ENST00000588411 VAMP7P51809 220 aa23.23■■□□□ 1.31
CIRBP-219ENST00000588411 FAM160A1Q05DH4 1040 aa23.23■■□□□ 1.31
CIRBP-219ENST00000588411 MTAPQ13126 283 aa23.23■■□□□ 1.31
CIRBP-219ENST00000588411 FZD5Q13467 585 aa23.23■■□□□ 1.31
CIRBP-219ENST00000588411 MAML2Q8IZL2 1156 aaPredicted RBP23.23■■□□□ 1.31
CIRBP-219ENST00000588411 IMPG2Q9BZV3 1241 aa23.23■■□□□ 1.31
CIRBP-219ENST00000588411 DPEP3Q9H4B8 488 aa23.23■■□□□ 1.31
CIRBP-219ENST00000588411 GKN1Q9NS71 199 aa23.23■■□□□ 1.31
CIRBP-219ENST00000588411 TRPM5Q9NZQ8 1165 aa23.23■■□□□ 1.31
CIRBP-219ENST00000588411 HOOK1Q9UJC3 728 aaKnown RBP23.23■■□□□ 1.31
CIRBP-219ENST00000588411 TICRRQ7Z2Z1 1910 aa23.23■■□□□ 1.31
CIRBP-219ENST00000588411 F8VP50 259 aa23.22■■□□□ 1.31
CIRBP-219ENST00000588411 KINO60870 393 aaKnown RBP23.22■■□□□ 1.31
CIRBP-219ENST00000588411 PFKLP17858 780 aa23.22■■□□□ 1.31
CIRBP-219ENST00000588411 PIK3CAP42336 1068 aa23.22■■□□□ 1.31
CIRBP-219ENST00000588411 SOX9P48436 509 aa23.22■■□□□ 1.31
CIRBP-219ENST00000588411 PPP3CCP48454 512 aa23.22■■□□□ 1.31
CIRBP-219ENST00000588411 DLG4P78352 724 aa23.22■■□□□ 1.31
CIRBP-219ENST00000588411 AMPD2Q01433 879 aa23.22■■□□□ 1.31
CIRBP-219ENST00000588411 ENPEPQ07075 957 aa23.22■■□□□ 1.31
CIRBP-219ENST00000588411 DGKKQ5KSL6 1271 aa23.22■■□□□ 1.31
CIRBP-219ENST00000588411 SCARA5Q6ZMJ2 495 aa23.22■■□□□ 1.31
CIRBP-219ENST00000588411 MAMSTRQ6ZN01 415 aa23.22■■□□□ 1.31
CIRBP-219ENST00000588411 SV2AQ7L0J3 742 aa23.22■■□□□ 1.31
CIRBP-219ENST00000588411 FAM186BQ8IYM0 893 aa23.22■■□□□ 1.31
CIRBP-219ENST00000588411 TTC8Q8TAM2 541 aa23.22■■□□□ 1.31
CIRBP-219ENST00000588411 PRMT8Q9NR22 394 aaPredicted RBP23.22■■□□□ 1.31
CIRBP-219ENST00000588411 CCL26Q9Y258 94 aa23.22■■□□□ 1.31
CIRBP-219ENST00000588411 COL4A2P08572 1712 aa23.22■■□□□ 1.31
CIRBP-219ENST00000588411 VNN1O95497 513 aa23.21■■□□□ 1.31
CIRBP-219ENST00000588411 PSMC2P35998 433 aaKnown RBP23.21■■□□□ 1.31
CIRBP-219ENST00000588411 CCR3P51677 355 aa23.21■■□□□ 1.31
CIRBP-219ENST00000588411 NOP14P78316 857 aaKnown RBP23.21■■□□□ 1.31
CIRBP-219ENST00000588411 TNK2Q07912 1038 aa23.21■■□□□ 1.31
CIRBP-219ENST00000588411 PDGFRLQ15198 375 aa23.21■■□□□ 1.31
CIRBP-219ENST00000588411 ATRIPQ8WXE1 791 aa23.21■■□□□ 1.31
CIRBP-219ENST00000588411 FAM83CQ9BQN1 747 aa23.21■■□□□ 1.31
CIRBP-219ENST00000588411 TTLL2Q9BWV7 592 aa23.21■■□□□ 1.31
CIRBP-219ENST00000588411 FAM126AQ9BYI3 521 aaPredicted RBP23.21■■□□□ 1.31
CIRBP-219ENST00000588411 NME7Q9Y5B8 376 aa23.21■■□□□ 1.31
CIRBP-219ENST00000588411 PCDHGA2Q9Y5H1 932 aa23.21■■□□□ 1.31
CIRBP-219ENST00000588411 CACNA1IQ9P0X4 2223 aa23.21■■□□□ 1.31
CIRBP-219ENST00000588411 AKAP3O75969 853 aa23.2■■□□□ 1.3
CIRBP-219ENST00000588411 SMC2O95347 1197 aa23.2■■□□□ 1.3
CIRBP-219ENST00000588411 CHRNB1P11230 501 aa23.2■■□□□ 1.3
CIRBP-219ENST00000588411 RAP1GAPP47736 663 aa23.2■■□□□ 1.3
CIRBP-219ENST00000588411 CDH8P55286 799 aa23.2■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms