RNA–Protein interactions for RNA: ENST00000587470.1

VMP1-205, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-205ENST00000587470 HEATR3Q7Z4Q2 680 aa5.37□□□□□ -1.55
VMP1-205ENST00000587470 SRRM1Q8IYB3 904 aaKnown RBP5.37□□□□□ -1.55
VMP1-205ENST00000587470 PSD4Q8NDX1 1056 aa5.37□□□□□ -1.55
VMP1-205ENST00000587470 DDX17Q92841 729 aaKnown RBP5.37□□□□□ -1.55
VMP1-205ENST00000587470 TNPO1Q92973 898 aaKnown RBP5.37□□□□□ -1.55
VMP1-205ENST00000587470 RGMAQ96B86 450 aa5.37□□□□□ -1.55
VMP1-205ENST00000587470 PBKQ96KB5 322 aa5.37□□□□□ -1.55
VMP1-205ENST00000587470 HAPLN3Q96S86 360 aa5.37□□□□□ -1.55
VMP1-205ENST00000587470 SMOC2Q9H3U7 446 aa5.37□□□□□ -1.55
VMP1-205ENST00000587470 KMT5AQ9NQR1 393 aa5.37□□□□□ -1.55
VMP1-205ENST00000587470 HOMER2Q9NSB8 354 aa5.37□□□□□ -1.55
VMP1-205ENST00000587470 ABCF2Q9UG63 623 aa5.37□□□□□ -1.55
VMP1-205ENST00000587470 FEZ2Q9UHY8 353 aaPredicted RBP5.37□□□□□ -1.55
VMP1-205ENST00000587470 AGAP1Q9UPQ3 857 aa5.37□□□□□ -1.55
VMP1-205ENST00000587470 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.37□□□□□ -1.55
VMP1-205ENST00000587470 RAB3GAP2Q9H2M9 1393 aa5.37□□□□□ -1.55
VMP1-205ENST00000587470 ARHGAP23Q9P227 1491 aa5.37□□□□□ -1.55
VMP1-205ENST00000587470 CEP152O94986 1710 aa5.37□□□□□ -1.55
VMP1-205ENST00000587470 FTLP02792 175 aaPredicted RBP5.36□□□□□ -1.55
VMP1-205ENST00000587470 GNAI2P04899 355 aa5.36□□□□□ -1.55
VMP1-205ENST00000587470 ITGALP20701 1170 aa5.36□□□□□ -1.55
VMP1-205ENST00000587470 ITPKBP27987 946 aa5.36□□□□□ -1.55
VMP1-205ENST00000587470 FAM153CQ494X1 144 aa5.36□□□□□ -1.55
VMP1-205ENST00000587470 PTF1AQ7RTS3 328 aa5.36□□□□□ -1.55
VMP1-205ENST00000587470 USP37Q86T82 979 aa5.36□□□□□ -1.55
VMP1-205ENST00000587470 CPA6Q8N4T0 437 aa5.36□□□□□ -1.55
VMP1-205ENST00000587470 FAM167AQ96KS9 214 aa5.36□□□□□ -1.55
VMP1-205ENST00000587470 MRPL46Q9H2W6 279 aaKnown RBP5.36□□□□□ -1.55
VMP1-205ENST00000587470 SLC52A1Q9NWF4 448 aa5.36□□□□□ -1.55
VMP1-205ENST00000587470 EHD3Q9NZN3 535 aa5.36□□□□□ -1.55
VMP1-205ENST00000587470 ST3GAL5Q9UNP4 418 aa5.36□□□□□ -1.55
VMP1-205ENST00000587470 RAD54BQ9Y620 910 aa5.36□□□□□ -1.55
VMP1-205ENST00000587470 WNT6Q9Y6F9 365 aa5.36□□□□□ -1.55
VMP1-205ENST00000587470 RPRD2Q5VT52 1461 aaKnown RBP5.36□□□□□ -1.55
VMP1-205ENST00000587470 BCL9LQ86UU0 1499 aa5.36□□□□□ -1.55
VMP1-205ENST00000587470 EFCAB6Q5THR3 1501 aa5.36□□□□□ -1.55
VMP1-205ENST00000587470 DIP2AQ14689 1571 aa5.36□□□□□ -1.55
VMP1-205ENST00000587470 UBR1Q8IWV7 1749 aa5.35□□□□□ -1.55
VMP1-205ENST00000587470 KDM5AP29375 1690 aaKnown RBP5.35□□□□□ -1.55
VMP1-205ENST00000587470 GCC2Q8IWJ2 1684 aa5.35□□□□□ -1.55
VMP1-205ENST00000587470 IQGAP3Q86VI3 1631 aa5.35□□□□□ -1.55
VMP1-205ENST00000587470 INO80B-WBP1J3KQ70 363 aa5.35□□□□□ -1.55
VMP1-205ENST00000587470 VPS4BO75351 444 aa5.35□□□□□ -1.55
VMP1-205ENST00000587470 URI1O94763 535 aaPredicted RBP5.35□□□□□ -1.55
VMP1-205ENST00000587470 KIF20AO95235 890 aa5.35□□□□□ -1.55
VMP1-205ENST00000587470 IL33O95760 270 aa5.35□□□□□ -1.55
VMP1-205ENST00000587470 TTLL1O95922 423 aa5.35□□□□□ -1.55
VMP1-205ENST00000587470 PROK1P58294 105 aa5.35□□□□□ -1.55
VMP1-205ENST00000587470 PGS1Q32NB8 556 aa5.35□□□□□ -1.55
VMP1-205ENST00000587470 PLAC9Q5JTB6 97 aa5.35□□□□□ -1.55
VMP1-205ENST00000587470 RBM20Q5T481 1227 aaKnown RBP5.35□□□□□ -1.55
VMP1-205ENST00000587470 BRINP3Q76B58 766 aa5.35□□□□□ -1.55
VMP1-205ENST00000587470 PPP1R32Q7Z5V6 425 aa5.35□□□□□ -1.55
VMP1-205ENST00000587470 SH2D3CQ8N5H7 860 aa5.35□□□□□ -1.55
VMP1-205ENST00000587470 RFKQ969G6 155 aa5.35□□□□□ -1.55
VMP1-205ENST00000587470 HSPBAP1Q96EW2 488 aa5.35□□□□□ -1.55
VMP1-205ENST00000587470 NELL2Q99435 816 aa5.35□□□□□ -1.55
VMP1-205ENST00000587470 ACTRT3Q9BYD9 372 aa5.35□□□□□ -1.55
VMP1-205ENST00000587470 INO80BQ9C086 356 aaPredicted RBP5.35□□□□□ -1.55
VMP1-205ENST00000587470 TINAGL1Q9GZM7 467 aaPredicted RBP5.35□□□□□ -1.55
VMP1-205ENST00000587470 LMBRD1Q9NUN5 540 aa5.35□□□□□ -1.55
VMP1-205ENST00000587470 MRPS18AQ9NVS2 196 aaKnown RBP5.35□□□□□ -1.55
VMP1-205ENST00000587470 LUC7L2Q9Y383 392 aaKnown RBP5.35□□□□□ -1.55
VMP1-205ENST00000587470 TET3O43151 1660 aa5.34□□□□□ -1.55
VMP1-205ENST00000587470 ATRNO75882 1429 aa5.34□□□□□ -1.55
VMP1-205ENST00000587470 TMEM2Q9UHN6 1383 aa5.34□□□□□ -1.55
VMP1-205ENST00000587470 RHOP08100 348 aa5.34□□□□□ -1.55
VMP1-205ENST00000587470 NR2F6P10588 404 aa5.34□□□□□ -1.55
VMP1-205ENST00000587470 TYRP14679 529 aa5.34□□□□□ -1.55
VMP1-205ENST00000587470 AKAP5P24588 427 aa5.34□□□□□ -1.55
VMP1-205ENST00000587470 TOB1P50616 345 aaPredicted RBP5.34□□□□□ -1.55
VMP1-205ENST00000587470 KRTAP10-11P60412 298 aa5.34□□□□□ -1.55
VMP1-205ENST00000587470 BMPR2Q13873 1038 aa5.34□□□□□ -1.55
VMP1-205ENST00000587470 BRDTQ58F21 947 aaPredicted RBP5.34□□□□□ -1.55
VMP1-205ENST00000587470 RASAL3Q86YV0 1011 aa5.34□□□□□ -1.55
VMP1-205ENST00000587470 FAM109AQ8N4B1 249 aa5.34□□□□□ -1.55
VMP1-205ENST00000587470 HASPINQ8TF76 798 aa5.34□□□□□ -1.55
VMP1-205ENST00000587470 ANKS1AQ92625 1134 aa5.34□□□□□ -1.55
VMP1-205ENST00000587470 FKBP10Q96AY3 582 aa5.34□□□□□ -1.55
VMP1-205ENST00000587470 FAM136AQ96C01 138 aa5.34□□□□□ -1.55
VMP1-205ENST00000587470 CHMP4CQ96CF2 233 aa5.34□□□□□ -1.55
VMP1-205ENST00000587470 BRINP2Q9C0B6 783 aa5.34□□□□□ -1.55
VMP1-205ENST00000587470 ST6GALNAC1Q9NSC7 600 aaPredicted RBP5.34□□□□□ -1.55
VMP1-205ENST00000587470 PNPOQ9NVS9 261 aa5.34□□□□□ -1.55
VMP1-205ENST00000587470 E9PCH4 1651 aa5.34□□□□□ -1.56
VMP1-205ENST00000587470 PNPLA6Q8IY17 1366 aa5.33□□□□□ -1.56
VMP1-205ENST00000587470 AOX1Q06278 1338 aa5.33□□□□□ -1.56
VMP1-205ENST00000587470 ZFXP17010 805 aaPredicted RBP5.33□□□□□ -1.56
VMP1-205ENST00000587470 VCAM1P19320 739 aa5.33□□□□□ -1.56
VMP1-205ENST00000587470 CHRM3P20309 590 aa5.33□□□□□ -1.56
VMP1-205ENST00000587470 CD6P30203 668 aa5.33□□□□□ -1.56
VMP1-205ENST00000587470 GCLCP48506 637 aaPredicted RBP5.33□□□□□ -1.56
VMP1-205ENST00000587470 MAP2K6P52564 334 aa5.33□□□□□ -1.56
VMP1-205ENST00000587470 SRSF4Q08170 494 aaKnown RBP5.33□□□□□ -1.56
VMP1-205ENST00000587470 KIAA1614Q5VZ46 1190 aa5.33□□□□□ -1.56
VMP1-205ENST00000587470 FAM160B1Q5W0V3 765 aa5.33□□□□□ -1.56
VMP1-205ENST00000587470 FCRLBQ6BAA4 426 aa5.33□□□□□ -1.56
VMP1-205ENST00000587470 AMIGO2Q86SJ2 522 aa5.33□□□□□ -1.56
VMP1-205ENST00000587470 ZBTB46Q86UZ6 589 aa5.33□□□□□ -1.56
VMP1-205ENST00000587470 PPP1R3BQ86XI6 285 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms