RNA–Protein interactions for RNA: ENST00000586704.5

TMEM259-205, Transcript of transmembrane protein 259, human

TSL 5

Gene TMEM259, Length 2,538 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMEM259-205	ENST00000586704	CILP	O75339	1184 aa		18.9	■□□□□ 0.62
TMEM259-205	ENST00000586704	LRCH4	O75427	683 aa		18.9	■□□□□ 0.62
TMEM259-205	ENST00000586704	CD48	P09326	243 aa		18.9	■□□□□ 0.62
TMEM259-205	ENST00000586704	PAX7	P23759	505 aa		18.9	■□□□□ 0.62
TMEM259-205	ENST00000586704	PIGH	Q14442	188 aa	Predicted RBP	18.9	■□□□□ 0.62
TMEM259-205	ENST00000586704	TMEM132D	Q14C87	1099 aa		18.9	■□□□□ 0.62
TMEM259-205	ENST00000586704	GPR142	Q7Z601	462 aa		18.9	■□□□□ 0.62
TMEM259-205	ENST00000586704	XYLT1	Q86Y38	959 aa		18.9	■□□□□ 0.62
TMEM259-205	ENST00000586704	TAB3	Q8N5C8	712 aa	Predicted RBP	18.9	■□□□□ 0.62
TMEM259-205	ENST00000586704	MAB21L3	Q8N8X9	362 aa		18.9	■□□□□ 0.62
TMEM259-205	ENST00000586704	LENG1	Q96BZ8	264 aa	Predicted RBP	18.9	■□□□□ 0.62
TMEM259-205	ENST00000586704	ABCF3	Q9NUQ8	709 aa		18.9	■□□□□ 0.62
TMEM259-205	ENST00000586704	HES2	Q9Y543	173 aa		18.9	■□□□□ 0.62
TMEM259-205	ENST00000586704	TRIP11	Q15643	1979 aa		18.89	■□□□□ 0.61
TMEM259-205	ENST00000586704	MAGEB2	O15479	319 aa		18.89	■□□□□ 0.61
TMEM259-205	ENST00000586704	VIM	P08670	466 aa	Known RBP	18.89	■□□□□ 0.61
TMEM259-205	ENST00000586704	CDKN2B	P42772	138 aa		18.89	■□□□□ 0.61
TMEM259-205	ENST00000586704	PLCB3	Q01970	1234 aa		18.89	■□□□□ 0.61
TMEM259-205	ENST00000586704	ZNF268	Q14587	947 aa	Predicted RBP	18.89	■□□□□ 0.61
TMEM259-205	ENST00000586704	FAM187B	Q17R55	369 aa		18.89	■□□□□ 0.61
TMEM259-205	ENST00000586704	EP400NL	Q6ZTU2	488 aa		18.89	■□□□□ 0.61
TMEM259-205	ENST00000586704	SYDE1	Q6ZW31	735 aa	Predicted RBP	18.89	■□□□□ 0.61
TMEM259-205	ENST00000586704	KIRREL3	Q8IZU9	778 aa		18.89	■□□□□ 0.61
TMEM259-205	ENST00000586704	C12orf29	Q8N999	325 aa		18.89	■□□□□ 0.61
TMEM259-205	ENST00000586704	TMEM176A	Q96HP8	235 aa		18.89	■□□□□ 0.61
TMEM259-205	ENST00000586704	RSRC1	Q96IZ7	334 aa	Known RBP	18.89	■□□□□ 0.61
TMEM259-205	ENST00000586704	TMEM121	Q9BTD3	319 aa		18.89	■□□□□ 0.61
TMEM259-205	ENST00000586704	TMEM109	Q9BVC6	243 aa		18.89	■□□□□ 0.61
TMEM259-205	ENST00000586704	CDHR5	Q9HBB8	845 aa		18.89	■□□□□ 0.61
TMEM259-205	ENST00000586704	NINJ2	Q9NZG7	142 aa		18.89	■□□□□ 0.61
TMEM259-205	ENST00000586704	CEP350	Q5VT06	3117 aa		18.89	■□□□□ 0.61
TMEM259-205	ENST00000586704	PPEF2	O14830	753 aa		18.89	■□□□□ 0.61
TMEM259-205	ENST00000586704	TJP3	O95049	919 aa		18.89	■□□□□ 0.61
TMEM259-205	ENST00000586704	TNFAIP8L3	Q5GJ75	292 aa		18.89	■□□□□ 0.61
TMEM259-205	ENST00000586704	SH3PXD2A	Q5TCZ1	1133 aa		18.89	■□□□□ 0.61
TMEM259-205	ENST00000586704	TRMT10C	Q7L0Y3	403 aa	Known RBP	18.89	■□□□□ 0.61
TMEM259-205	ENST00000586704	CCHCR1	Q8TD31	782 aa		18.89	■□□□□ 0.61
TMEM259-205	ENST00000586704	NSMCE1	Q8WV22	266 aa		18.89	■□□□□ 0.61
TMEM259-205	ENST00000586704	PIWIL1	Q96J94	861 aa	Known RBP	18.89	■□□□□ 0.61
TMEM259-205	ENST00000586704	HOMER3	Q9NSC5	361 aa		18.89	■□□□□ 0.61
TMEM259-205	ENST00000586704	SIGLEC16	A6NMB1	481 aa		18.88	■□□□□ 0.61
TMEM259-205	ENST00000586704	CLGN	O14967	610 aa		18.88	■□□□□ 0.61
TMEM259-205	ENST00000586704	TTC4	O95801	387 aa		18.88	■□□□□ 0.61
TMEM259-205	ENST00000586704	CETP	P11597	493 aa		18.88	■□□□□ 0.61
TMEM259-205	ENST00000586704	CYP3A5	P20815	502 aa		18.88	■□□□□ 0.61
TMEM259-205	ENST00000586704	CETN2	P41208	172 aa		18.88	■□□□□ 0.61
TMEM259-205	ENST00000586704	ARSE	P51690	589 aa		18.88	■□□□□ 0.61
TMEM259-205	ENST00000586704	NDST1	P52848	882 aa		18.88	■□□□□ 0.61
TMEM259-205	ENST00000586704	SLC25A11	Q02978	314 aa	Known RBP	18.88	■□□□□ 0.61
TMEM259-205	ENST00000586704	MYO1E	Q12965	1108 aa		18.88	■□□□□ 0.61
TMEM259-205	ENST00000586704	NAA25	Q14CX7	972 aa		18.88	■□□□□ 0.61
TMEM259-205	ENST00000586704	TFDP3	Q5H9I0	405 aa		18.88	■□□□□ 0.61
TMEM259-205	ENST00000586704	CROCCP2	Q86T23	111 aa		18.88	■□□□□ 0.61
TMEM259-205	ENST00000586704	CCDC89	Q8N998	374 aa		18.88	■□□□□ 0.61
TMEM259-205	ENST00000586704	OR6J1	Q8NGC5	347 aa		18.88	■□□□□ 0.61
TMEM259-205	ENST00000586704	NPLOC4	Q8TAT6	608 aa		18.88	■□□□□ 0.61
TMEM259-205	ENST00000586704	MAML3	Q96JK9	1138 aa		18.88	■□□□□ 0.61
TMEM259-205	ENST00000586704	NSRP1	Q9H0G5	558 aa	Known RBP	18.88	■□□□□ 0.61
TMEM259-205	ENST00000586704	LHX5	Q9H2C1	402 aa		18.88	■□□□□ 0.61
TMEM259-205	ENST00000586704	DPP3	Q9NY33	737 aa		18.88	■□□□□ 0.61
TMEM259-205	ENST00000586704	MED7	O43513	233 aa		18.88	■□□□□ 0.61
TMEM259-205	ENST00000586704	GRAP2	O75791	330 aa		18.88	■□□□□ 0.61
TMEM259-205	ENST00000586704	IFNB1	P01574	187 aa		18.88	■□□□□ 0.61
TMEM259-205	ENST00000586704	MMP3	P08254	477 aa		18.88	■□□□□ 0.61
TMEM259-205	ENST00000586704	TNFAIP2	Q03169	654 aa		18.88	■□□□□ 0.61
TMEM259-205	ENST00000586704	CYP4F22	Q6NT55	531 aa		18.88	■□□□□ 0.61
TMEM259-205	ENST00000586704	KIF12	Q96FN5	646 aa		18.88	■□□□□ 0.61
TMEM259-205	ENST00000586704	ACAP3	Q96P50	834 aa		18.88	■□□□□ 0.61
TMEM259-205	ENST00000586704	PTPN18	Q99952	460 aa		18.88	■□□□□ 0.61
TMEM259-205	ENST00000586704	TBK1	Q9UHD2	729 aa		18.88	■□□□□ 0.61
TMEM259-205	ENST00000586704	C15orf41	Q9Y2V0	281 aa		18.88	■□□□□ 0.61
TMEM259-205	ENST00000586704	L3MBTL1	Q9Y468	752 aa		18.88	■□□□□ 0.61
TMEM259-205	ENST00000586704	KAT6A	Q92794	2004 aa		18.87	■□□□□ 0.61
TMEM259-205	ENST00000586704	RBM47	A0AV96	593 aa	Known RBP	18.87	■□□□□ 0.61
TMEM259-205	ENST00000586704	C3orf70	A6NLC5	250 aa	Predicted RBP	18.87	■□□□□ 0.61
TMEM259-205	ENST00000586704	SNX3	O60493	162 aa		18.87	■□□□□ 0.61
TMEM259-205	ENST00000586704	OAS1	P00973	400 aa	Known RBP	18.87	■□□□□ 0.61
TMEM259-205	ENST00000586704	ALAD	P13716	330 aa		18.87	■□□□□ 0.61
TMEM259-205	ENST00000586704	GPS1	Q13098	491 aa		18.87	■□□□□ 0.61
TMEM259-205	ENST00000586704	CNGA2	Q16280	664 aa		18.87	■□□□□ 0.61
TMEM259-205	ENST00000586704	GLRA4	Q5JXX5	417 aa		18.87	■□□□□ 0.61
TMEM259-205	ENST00000586704	EXOC3L1	Q86VI1	746 aa		18.87	■□□□□ 0.61
TMEM259-205	ENST00000586704	STRIP2	Q9ULQ0	834 aa		18.87	■□□□□ 0.61
TMEM259-205	ENST00000586704	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	18.87	■□□□□ 0.61
TMEM259-205	ENST00000586704	UBOX5	O94941	541 aa		18.87	■□□□□ 0.61
TMEM259-205	ENST00000586704	NPTXR	O95502	500 aa		18.87	■□□□□ 0.61
TMEM259-205	ENST00000586704	ANP32D	O95626	131 aa		18.87	■□□□□ 0.61
TMEM259-205	ENST00000586704	NQO1	P15559	274 aa	Known RBP	18.87	■□□□□ 0.61
TMEM259-205	ENST00000586704	IFNAR2	P48551	515 aa		18.87	■□□□□ 0.61
TMEM259-205	ENST00000586704	NCALD	P61601	193 aa		18.87	■□□□□ 0.61
TMEM259-205	ENST00000586704	ADCY1	Q08828	1119 aa		18.87	■□□□□ 0.61
TMEM259-205	ENST00000586704	LRRC38	Q5VT99	294 aa		18.87	■□□□□ 0.61
TMEM259-205	ENST00000586704	CAPN12	Q6ZSI9	719 aa		18.87	■□□□□ 0.61
TMEM259-205	ENST00000586704	IFNLR1	Q8IU57	520 aa	Predicted RBP	18.87	■□□□□ 0.61
TMEM259-205	ENST00000586704	AGAP11	Q8TF27	550 aa		18.87	■□□□□ 0.61
TMEM259-205	ENST00000586704	LPIN3	Q9BQK8	851 aa		18.87	■□□□□ 0.61
TMEM259-205	ENST00000586704	ASB7	Q9H672	318 aa		18.87	■□□□□ 0.61
TMEM259-205	ENST00000586704	GPD2	P43304	727 aa		18.86	■□□□□ 0.61
TMEM259-205	ENST00000586704	KCNJ2	P63252	427 aa		18.86	■□□□□ 0.61
TMEM259-205	ENST00000586704	POU5F1B	Q06416	359 aa		18.86	■□□□□ 0.61

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