RNA–Protein interactions for RNA: ENST00000584400.5

SMARCD2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 1,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-210ENST00000584400 DENND5BQ6ZUT9 1274 aa28.92■■■□□ 2.22
SMARCD2-210ENST00000584400 ARID3BQ8IVW6 561 aaPredicted RBP28.92■■■□□ 2.22
SMARCD2-210ENST00000584400 FLCNQ8NFG4 579 aa28.92■■■□□ 2.22
SMARCD2-210ENST00000584400 PLA2G2FQ9BZM2 168 aa28.92■■■□□ 2.22
SMARCD2-210ENST00000584400 SDCBP2Q9H190 292 aa28.92■■■□□ 2.22
SMARCD2-210ENST00000584400 OBP2AQ9NY56 170 aa28.92■■■□□ 2.22
SMARCD2-210ENST00000584400 MYO10Q9HD67 2058 aa28.92■■■□□ 2.22
SMARCD2-210ENST00000584400 GOLGA6L22H0YM25 854 aa28.91■■■□□ 2.22
SMARCD2-210ENST00000584400 STK25O00506 426 aa28.91■■■□□ 2.22
SMARCD2-210ENST00000584400 F11P03951 625 aa28.91■■■□□ 2.22
SMARCD2-210ENST00000584400 NDST1P52848 882 aa28.91■■■□□ 2.22
SMARCD2-210ENST00000584400 CYP4F8P98187 520 aa28.91■■■□□ 2.22
SMARCD2-210ENST00000584400 ASTLQ6HA08 431 aaPredicted RBP28.91■■■□□ 2.22
SMARCD2-210ENST00000584400 MFSD6LQ8IWD5 586 aa28.91■■■□□ 2.22
SMARCD2-210ENST00000584400 YAF2Q8IY57 180 aa28.91■■■□□ 2.22
SMARCD2-210ENST00000584400 CRYBG2Q8N1P7 616 aa28.91■■■□□ 2.22
SMARCD2-210ENST00000584400 DNASE1L2Q92874 299 aa28.91■■■□□ 2.22
SMARCD2-210ENST00000584400 IRF7Q92985 503 aa28.91■■■□□ 2.22
SMARCD2-210ENST00000584400 ELMO3Q96BJ8 720 aa28.91■■■□□ 2.22
SMARCD2-210ENST00000584400 MED10Q9BTT4 135 aa28.91■■■□□ 2.22
SMARCD2-210ENST00000584400 CLSTN2Q9H4D0 955 aa28.91■■■□□ 2.22
SMARCD2-210ENST00000584400 FAM124BQ9H5Z6 455 aaPredicted RBP28.91■■■□□ 2.22
SMARCD2-210ENST00000584400 BRD9Q9H8M2 597 aa28.91■■■□□ 2.22
SMARCD2-210ENST00000584400 DOCK6Q96HP0 2047 aa28.91■■■□□ 2.22
SMARCD2-210ENST00000584400 HEPACAM2A8MVW5 462 aa28.9■■■□□ 2.22
SMARCD2-210ENST00000584400 AVPR1AP37288 418 aa28.9■■■□□ 2.22
SMARCD2-210ENST00000584400 PRKCQQ04759 706 aa28.9■■■□□ 2.22
SMARCD2-210ENST00000584400 INCA1Q0VD86 236 aa28.9■■■□□ 2.22
SMARCD2-210ENST00000584400 CETN1Q12798 172 aa28.9■■■□□ 2.22
SMARCD2-210ENST00000584400 STXBP5Q5T5C0 1151 aa28.9■■■□□ 2.22
SMARCD2-210ENST00000584400 SLC35C1Q96A29 364 aa28.9■■■□□ 2.22
SMARCD2-210ENST00000584400 DUSP9Q99956 384 aaKnown RBP28.9■■■□□ 2.22
SMARCD2-210ENST00000584400 NT5C1AQ9BXI3 368 aa28.9■■■□□ 2.22
SMARCD2-210ENST00000584400 B3GNT5Q9BYG0 378 aa28.9■■■□□ 2.22
SMARCD2-210ENST00000584400 APOBEC3GQ9HC16 384 aaKnown RBP28.9■■■□□ 2.22
SMARCD2-210ENST00000584400 UTP3Q9NQZ2 479 aaKnown RBP eCLIP28.9■■■□□ 2.22
SMARCD2-210ENST00000584400 VIPR2P41587 438 aa28.89■■■□□ 2.22
SMARCD2-210ENST00000584400 SLC44A4Q53GD3 710 aa28.89■■■□□ 2.22
SMARCD2-210ENST00000584400 PHLDB3Q6NSJ2 640 aa28.89■■■□□ 2.22
SMARCD2-210ENST00000584400 VITQ6UXI7 678 aa28.89■■■□□ 2.22
SMARCD2-210ENST00000584400 ACOT1Q86TX2 421 aa28.89■■■□□ 2.22
SMARCD2-210ENST00000584400 MLKLQ8NB16 471 aa28.89■■■□□ 2.22
SMARCD2-210ENST00000584400 SMARCD1Q96GM5 515 aa28.89■■■□□ 2.22
SMARCD2-210ENST00000584400 ZNF518BQ9C0D4 1074 aa28.89■■■□□ 2.22
SMARCD2-210ENST00000584400 NUP62CLQ9H1M0 184 aa28.89■■■□□ 2.22
SMARCD2-210ENST00000584400 COQ4Q9Y3A0 265 aa28.89■■■□□ 2.22
SMARCD2-210ENST00000584400 KRBA1A5PL33 1030 aa28.88■■■□□ 2.21
SMARCD2-210ENST00000584400 F8VP50 259 aa28.88■■■□□ 2.21
SMARCD2-210ENST00000584400 ZNF263O14978 683 aa28.88■■■□□ 2.21
SMARCD2-210ENST00000584400 PPP3CCP48454 512 aa28.88■■■□□ 2.21
SMARCD2-210ENST00000584400 GRM2Q14416 872 aa28.88■■■□□ 2.21
SMARCD2-210ENST00000584400 CBWD6Q4V339 395 aa28.88■■■□□ 2.21
SMARCD2-210ENST00000584400 CBWD3Q5JTY5 395 aa28.88■■■□□ 2.21
SMARCD2-210ENST00000584400 CBWD5Q5RIA9 395 aa28.88■■■□□ 2.21
SMARCD2-210ENST00000584400 CMTM8Q8IZV2 173 aa28.88■■■□□ 2.21
SMARCD2-210ENST00000584400 SLC46A2Q9BY10 475 aa28.88■■■□□ 2.21
SMARCD2-210ENST00000584400 TRPV5Q9NQA5 729 aa28.88■■■□□ 2.21
SMARCD2-210ENST00000584400 AOC1P19801 751 aa28.87■■■□□ 2.21
SMARCD2-210ENST00000584400 GDI1P31150 447 aa28.87■■■□□ 2.21
SMARCD2-210ENST00000584400 PDE6CP51160 858 aa28.87■■■□□ 2.21
SMARCD2-210ENST00000584400 STX17P56962 302 aa28.87■■■□□ 2.21
SMARCD2-210ENST00000584400 MLF2Q15773 248 aaPredicted RBP28.87■■■□□ 2.21
SMARCD2-210ENST00000584400 TMEM150AQ86TG1 271 aa28.87■■■□□ 2.21
SMARCD2-210ENST00000584400 MON1AQ86VX9 555 aa28.87■■■□□ 2.21
SMARCD2-210ENST00000584400 CELF5Q8N6W0 485 aaKnown RBP28.87■■■□□ 2.21
SMARCD2-210ENST00000584400 MAB21L3Q8N8X9 362 aa28.87■■■□□ 2.21
SMARCD2-210ENST00000584400 STKLD1Q8NE28 680 aa28.87■■■□□ 2.21
SMARCD2-210ENST00000584400 SEMA4DQ92854 862 aa28.87■■■□□ 2.21
SMARCD2-210ENST00000584400 DMAP1Q9NPF5 467 aaPredicted RBP28.87■■■□□ 2.21
SMARCD2-210ENST00000584400 RWDD2AQ9UIY3 292 aa28.87■■■□□ 2.21
SMARCD2-210ENST00000584400 CCDC192P0DO97 292 aa28.86■■■□□ 2.21
SMARCD2-210ENST00000584400 NPR3P17342 541 aa28.86■■■□□ 2.21
SMARCD2-210ENST00000584400 VCPP55072 806 aaKnown RBP28.86■■■□□ 2.21
SMARCD2-210ENST00000584400 STARD6P59095 220 aa28.86■■■□□ 2.21
SMARCD2-210ENST00000584400 FAM35AQ86V20 835 aa28.86■■■□□ 2.21
SMARCD2-210ENST00000584400 TBC1D17Q9HA65 648 aa28.86■■■□□ 2.21
SMARCD2-210ENST00000584400 KIF9Q9HAQ2 790 aa28.86■■■□□ 2.21
SMARCD2-210ENST00000584400 LMBRD1Q9NUN5 540 aa28.86■■■□□ 2.21
SMARCD2-210ENST00000584400 THG1LQ9NWX6 298 aaKnown RBP28.86■■■□□ 2.21
SMARCD2-210ENST00000584400 CLDN5O00501 218 aa28.85■■■□□ 2.21
SMARCD2-210ENST00000584400 PMM2O15305 246 aa28.85■■■□□ 2.21
SMARCD2-210ENST00000584400 CHADO15335 359 aa28.85■■■□□ 2.21
SMARCD2-210ENST00000584400 CILPO75339 1184 aa28.85■■■□□ 2.21
SMARCD2-210ENST00000584400 RTN3O95197 1032 aaPredicted RBP28.85■■■□□ 2.21
SMARCD2-210ENST00000584400 CD58P19256 250 aa28.85■■■□□ 2.21
SMARCD2-210ENST00000584400 FMO5P49326 533 aa28.85■■■□□ 2.21
SMARCD2-210ENST00000584400 FCHO2Q0JRZ9 810 aa28.85■■■□□ 2.21
SMARCD2-210ENST00000584400 CWF19L1Q69YN2 538 aaKnown RBP28.85■■■□□ 2.21
SMARCD2-210ENST00000584400 NUP93Q8N1F7 819 aa28.85■■■□□ 2.21
SMARCD2-210ENST00000584400 SLITRK1Q96PX8 696 aa28.85■■■□□ 2.21
SMARCD2-210ENST00000584400 TTLL2Q9BWV7 592 aa28.85■■■□□ 2.21
SMARCD2-210ENST00000584400 SRRTQ9BXP5 876 aaKnown RBP28.85■■■□□ 2.21
SMARCD2-210ENST00000584400 TRPM5Q9NZQ8 1165 aa28.85■■■□□ 2.21
SMARCD2-210ENST00000584400 RAPGEFL1Q9UHV5 662 aa28.85■■■□□ 2.21
SMARCD2-210ENST00000584400 DACH1Q9UI36 760 aa28.85■■■□□ 2.21
SMARCD2-210ENST00000584400 P4HA2O15460 535 aa28.84■■■□□ 2.21
SMARCD2-210ENST00000584400 PFKLP17858 780 aa28.84■■■□□ 2.21
SMARCD2-210ENST00000584400 MARSP56192 900 aaKnown RBP28.84■■■□□ 2.21
SMARCD2-210ENST00000584400 YWHAEP62258 255 aaKnown RBP28.84■■■□□ 2.21
SMARCD2-210ENST00000584400 ARHGAP29Q52LW3 1261 aa28.84■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms