RNA–Protein interactions for RNA: ENST00000583930.5

CCDC178-213, Transcript of coiled-coil domain containing 178, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC178, Length 3,094 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC178-213ENST00000583930 FANCMQ8IYD8 2048 aa3.27□□□□□ -1.89
CCDC178-213ENST00000583930 SCN8AQ9UQD0 1980 aa3.27□□□□□ -1.89
CCDC178-213ENST00000583930 BLACEA4D250 179 aa3.26□□□□□ -1.89
CCDC178-213ENST00000583930 XPOTO43592 962 aaKnown RBP3.26□□□□□ -1.89
CCDC178-213ENST00000583930 MARCH6O60337 910 aa3.26□□□□□ -1.89
CCDC178-213ENST00000583930 LILRB5O75023 590 aa3.26□□□□□ -1.89
CCDC178-213ENST00000583930 ZNF189O75820 626 aaPredicted RBP3.26□□□□□ -1.89
CCDC178-213ENST00000583930 MTA2O94776 668 aa3.26□□□□□ -1.89
CCDC178-213ENST00000583930 LATS1O95835 1130 aa3.26□□□□□ -1.89
CCDC178-213ENST00000583930 AMHP03971 560 aa3.26□□□□□ -1.89
CCDC178-213ENST00000583930 PAEPP09466 180 aa3.26□□□□□ -1.89
CCDC178-213ENST00000583930 RPL13P26373 211 aaKnown RBP3.26□□□□□ -1.89
CCDC178-213ENST00000583930 TNK2Q07912 1038 aa3.26□□□□□ -1.89
CCDC178-213ENST00000583930 STILQ15468 1287 aa3.26□□□□□ -1.89
CCDC178-213ENST00000583930 ZACNQ401N2 412 aa3.26□□□□□ -1.89
CCDC178-213ENST00000583930 MIIPQ5JXC2 388 aa3.26□□□□□ -1.89
CCDC178-213ENST00000583930 FAM171BQ6P995 826 aa3.26□□□□□ -1.89
CCDC178-213ENST00000583930 HAUS6Q7Z4H7 955 aa3.26□□□□□ -1.89
CCDC178-213ENST00000583930 DHX40Q8IX18 779 aaKnown RBP3.26□□□□□ -1.89
CCDC178-213ENST00000583930 FAM217AQ8IXS0 508 aa3.26□□□□□ -1.89
CCDC178-213ENST00000583930 TMEM192Q8IY95 271 aa3.26□□□□□ -1.89
CCDC178-213ENST00000583930 MYOCDQ8IZQ8 938 aa3.26□□□□□ -1.89
CCDC178-213ENST00000583930 SLC39A11Q8N1S5 342 aa3.26□□□□□ -1.89
CCDC178-213ENST00000583930 GPD1LQ8N335 351 aa3.26□□□□□ -1.89
CCDC178-213ENST00000583930 KLHL6Q8WZ60 621 aa3.26□□□□□ -1.89
CCDC178-213ENST00000583930 MSANTD3Q96H12 275 aa3.26□□□□□ -1.89
CCDC178-213ENST00000583930 FUBP3Q96I24 572 aaKnown RBP eCLIP3.26□□□□□ -1.89
CCDC178-213ENST00000583930 CEP170P1Q96L14 293 aa3.26□□□□□ -1.89
CCDC178-213ENST00000583930 DEFB118Q96PH6 123 aa3.26□□□□□ -1.89
CCDC178-213ENST00000583930 IER2Q9BTL4 223 aa3.26□□□□□ -1.89
CCDC178-213ENST00000583930 RNF208Q9H0X6 261 aa3.26□□□□□ -1.89
CCDC178-213ENST00000583930 XYLT2Q9H1B5 865 aa3.26□□□□□ -1.89
CCDC178-213ENST00000583930 MTIF3Q9H2K0 278 aaKnown RBP3.26□□□□□ -1.89
CCDC178-213ENST00000583930 SEMA6BQ9H3T3 888 aa3.26□□□□□ -1.89
CCDC178-213ENST00000583930 TMEM8AQ9HCN3 771 aa3.26□□□□□ -1.89
CCDC178-213ENST00000583930 PCDH12Q9NPG4 1184 aa3.26□□□□□ -1.89
CCDC178-213ENST00000583930 ANO10Q9NW15 660 aa3.26□□□□□ -1.89
CCDC178-213ENST00000583930 NR2E3Q9Y5X4 410 aa3.26□□□□□ -1.89
CCDC178-213ENST00000583930 PLXNA2O75051 1894 aa3.26□□□□□ -1.89
CCDC178-213ENST00000583930 SCN1AP35498 2009 aa3.26□□□□□ -1.89
CCDC178-213ENST00000583930 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.26□□□□□ -1.89
CCDC178-213ENST00000583930 hCG_1642624A0A1W2PR95 340 aa3.26□□□□□ -1.89
CCDC178-213ENST00000583930 VPS37CA5D8V6 355 aaPredicted RBP3.26□□□□□ -1.89
CCDC178-213ENST00000583930 E9PMD0 336 aa3.26□□□□□ -1.89
CCDC178-213ENST00000583930 H3BNC9 293 aa3.26□□□□□ -1.89
CCDC178-213ENST00000583930 PEX10O60683 326 aa3.26□□□□□ -1.89
CCDC178-213ENST00000583930 NOL4O94818 638 aa3.26□□□□□ -1.89
CCDC178-213ENST00000583930 ABLIM3O94929 683 aa3.26□□□□□ -1.89
CCDC178-213ENST00000583930 PRKCBP05771 671 aa3.26□□□□□ -1.89
CCDC178-213ENST00000583930 EPHX1P07099 455 aa3.26□□□□□ -1.89
CCDC178-213ENST00000583930 MYL3P08590 195 aa3.26□□□□□ -1.89
CCDC178-213ENST00000583930 ZNF286BP0CG31 522 aa3.26□□□□□ -1.89
CCDC178-213ENST00000583930 SETSIPP0DME0 302 aa3.26□□□□□ -1.89
CCDC178-213ENST00000583930 EPXP11678 715 aa3.26□□□□□ -1.89
CCDC178-213ENST00000583930 ATP1A3P13637 1013 aa3.26□□□□□ -1.89
CCDC178-213ENST00000583930 RAG1P15918 1043 aa3.26□□□□□ -1.89
CCDC178-213ENST00000583930 HSD3B2P26439 372 aa3.26□□□□□ -1.89
CCDC178-213ENST00000583930 GABRB2P47870 512 aa3.26□□□□□ -1.89
CCDC178-213ENST00000583930 PPP3CCP48454 512 aa3.26□□□□□ -1.89
CCDC178-213ENST00000583930 FKBP3Q00688 224 aaKnown RBP3.26□□□□□ -1.89
CCDC178-213ENST00000583930 NRG1Q02297 640 aaPredicted RBP3.26□□□□□ -1.89
CCDC178-213ENST00000583930 DSG1Q02413 1049 aa3.26□□□□□ -1.89
CCDC178-213ENST00000583930 IFRD2Q12894 506 aaPredicted RBP3.26□□□□□ -1.89
CCDC178-213ENST00000583930 KARSQ15046 597 aaKnown RBP3.26□□□□□ -1.89
CCDC178-213ENST00000583930 UPP1Q16831 310 aa3.26□□□□□ -1.89
CCDC178-213ENST00000583930 FAM209AQ5JX71 171 aa3.26□□□□□ -1.89
CCDC178-213ENST00000583930 ATF7IP2Q5U623 682 aa3.26□□□□□ -1.89
CCDC178-213ENST00000583930 TPGS2Q68CL5 300 aa3.26□□□□□ -1.89
CCDC178-213ENST00000583930 SLC8B1Q6J4K2 584 aa3.26□□□□□ -1.89
CCDC178-213ENST00000583930 DCLRE1AQ6PJP8 1040 aa3.26□□□□□ -1.89
CCDC178-213ENST00000583930 USP49Q70CQ1 688 aa3.26□□□□□ -1.89
CCDC178-213ENST00000583930 CHSY3Q70JA7 882 aa3.26□□□□□ -1.89
CCDC178-213ENST00000583930 NLRC3Q7RTR2 1065 aa3.26□□□□□ -1.89
CCDC178-213ENST00000583930 PHACTR4Q8IZ21 702 aa3.26□□□□□ -1.89
CCDC178-213ENST00000583930 CRYBG2Q8N1P7 616 aa3.26□□□□□ -1.89
CCDC178-213ENST00000583930 ZNF397Q8NF99 534 aaPredicted RBP3.26□□□□□ -1.89
CCDC178-213ENST00000583930 BAHD1Q8TBE0 780 aaPredicted RBP3.26□□□□□ -1.89
CCDC178-213ENST00000583930 FAM71BQ8TC56 605 aa3.26□□□□□ -1.89
CCDC178-213ENST00000583930 TMEM40Q8WWA1 233 aa3.26□□□□□ -1.89
CCDC178-213ENST00000583930 SMARCE1Q969G3 411 aa3.26□□□□□ -1.89
CCDC178-213ENST00000583930 AZIN2Q96A70 460 aa3.26□□□□□ -1.89
CCDC178-213ENST00000583930 PDLIM2Q96JY6 352 aa3.26□□□□□ -1.89
CCDC178-213ENST00000583930 MYRFLQ96LU7 910 aa3.26□□□□□ -1.89
CCDC178-213ENST00000583930 SLC6A18Q96N87 628 aa3.26□□□□□ -1.89
CCDC178-213ENST00000583930 RAD9AQ99638 391 aa3.26□□□□□ -1.89
CCDC178-213ENST00000583930 ZBP1Q9H171 429 aa3.26□□□□□ -1.89
CCDC178-213ENST00000583930 BHMT2Q9H2M3 363 aa3.26□□□□□ -1.89
CCDC178-213ENST00000583930 SIX2Q9NPC8 291 aa3.26□□□□□ -1.89
CCDC178-213ENST00000583930 HOMER2Q9NSB8 354 aa3.26□□□□□ -1.89
CCDC178-213ENST00000583930 RGL1Q9NZL6 768 aa3.26□□□□□ -1.89
CCDC178-213ENST00000583930 INTUQ9ULD6 942 aa3.26□□□□□ -1.89
CCDC178-213ENST00000583930 SIK3Q9Y2K2 1263 aa3.26□□□□□ -1.89
CCDC178-213ENST00000583930 NOC2LQ9Y3T9 749 aaKnown RBP3.26□□□□□ -1.89
CCDC178-213ENST00000583930 TNRC18O15417 2968 aaPredicted RBP3.26□□□□□ -1.89
CCDC178-213ENST00000583930 M0QZ92 97 aa3.25□□□□□ -1.89
CCDC178-213ENST00000583930 PTGESO14684 152 aa3.25□□□□□ -1.89
CCDC178-213ENST00000583930 POLR2DO15514 142 aaKnown RBP3.25□□□□□ -1.89
CCDC178-213ENST00000583930 NRDCO43847 1150 aa3.25□□□□□ -1.89
CCDC178-213ENST00000583930 MGEA5O60502 916 aa3.25□□□□□ -1.89
CCDC178-213ENST00000583930 GJB5O95377 273 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms