RNA–Protein interactions for RNA: ENST00000581979.5

SRSF1-204, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 1 (best)

Gene SRSF1, Length 1,720 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-204ENST00000581979 ANKRD54Q6NXT1 300 aa13.33□□□□□ -0.27
SRSF1-204ENST00000581979 DDX53Q86TM3 631 aaKnown RBP13.33□□□□□ -0.27
SRSF1-204ENST00000581979 RHOT2Q8IXI1 618 aa13.33□□□□□ -0.27
SRSF1-204ENST00000581979 SLC35G2Q8TBE7 412 aa13.33□□□□□ -0.27
SRSF1-204ENST00000581979 URGCPQ8TCY9 931 aa13.33□□□□□ -0.27
SRSF1-204ENST00000581979 ARHGEF26Q96DR7 871 aa13.33□□□□□ -0.27
SRSF1-204ENST00000581979 CYFIP2Q96F07 1278 aa13.33□□□□□ -0.27
SRSF1-204ENST00000581979 TMEM176AQ96HP8 235 aa13.33□□□□□ -0.27
SRSF1-204ENST00000581979 ZBP1Q9H171 429 aa13.33□□□□□ -0.27
SRSF1-204ENST00000581979 S1PR5Q9H228 398 aa13.33□□□□□ -0.27
SRSF1-204ENST00000581979 MIOSQ9NXC5 875 aa13.33□□□□□ -0.27
SRSF1-204ENST00000581979 DNAJB4Q9UDY4 337 aa13.33□□□□□ -0.27
SRSF1-204ENST00000581979 JRKLQ9Y4A0 524 aa13.33□□□□□ -0.27
SRSF1-204ENST00000581979 KPNA7A9QM74 516 aa13.33□□□□□ -0.28
SRSF1-204ENST00000581979 B4GALT3O60512 393 aa13.33□□□□□ -0.28
SRSF1-204ENST00000581979 CFHP08603 1231 aa13.33□□□□□ -0.28
SRSF1-204ENST00000581979 HOXB8P17481 243 aaPredicted RBP13.33□□□□□ -0.28
SRSF1-204ENST00000581979 AFF1P51825 1210 aaKnown RBP13.33□□□□□ -0.28
SRSF1-204ENST00000581979 INCA1Q0VD86 236 aa13.33□□□□□ -0.28
SRSF1-204ENST00000581979 ORC1Q13415 861 aa13.33□□□□□ -0.28
SRSF1-204ENST00000581979 PPP1R2P3Q6NXS1 205 aa13.33□□□□□ -0.28
SRSF1-204ENST00000581979 ZNF280BQ86YH2 543 aa13.33□□□□□ -0.28
SRSF1-204ENST00000581979 VPS52Q8N1B4 723 aa13.33□□□□□ -0.28
SRSF1-204ENST00000581979 GSTCDQ8NEC7 633 aa13.33□□□□□ -0.28
SRSF1-204ENST00000581979 WHAMMQ8TF30 809 aa13.33□□□□□ -0.28
SRSF1-204ENST00000581979 BCL7CQ8WUZ0 217 aaPredicted RBP13.33□□□□□ -0.28
SRSF1-204ENST00000581979 CPA5Q8WXQ8 436 aa13.33□□□□□ -0.28
SRSF1-204ENST00000581979 ZNF653Q96CK0 615 aa13.33□□□□□ -0.28
SRSF1-204ENST00000581979 TWNKQ96RR1 684 aa13.33□□□□□ -0.28
SRSF1-204ENST00000581979 ELOVL4Q9GZR5 314 aa13.33□□□□□ -0.28
SRSF1-204ENST00000581979 L2HGDHQ9H9P8 463 aa13.33□□□□□ -0.28
SRSF1-204ENST00000581979 OSGEPQ9NPF4 335 aa13.33□□□□□ -0.28
SRSF1-204ENST00000581979 HMGXB4Q9UGU5 601 aa13.33□□□□□ -0.28
SRSF1-204ENST00000581979 RAPGEFL1Q9UHV5 662 aa13.33□□□□□ -0.28
SRSF1-204ENST00000581979 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.33□□□□□ -0.28
SRSF1-204ENST00000581979 GRID2IPA4D2P6 1211 aa13.32□□□□□ -0.28
SRSF1-204ENST00000581979 LOC730098B7Z3J9 87 aa13.32□□□□□ -0.28
SRSF1-204ENST00000581979 DDHD2O94830 711 aa13.32□□□□□ -0.28
SRSF1-204ENST00000581979 CTSAP10619 480 aa13.32□□□□□ -0.28
SRSF1-204ENST00000581979 SLC11A1P49279 550 aa13.32□□□□□ -0.28
SRSF1-204ENST00000581979 NDST1P52848 882 aa13.32□□□□□ -0.28
SRSF1-204ENST00000581979 NOMO3P69849 1222 aa13.32□□□□□ -0.28
SRSF1-204ENST00000581979 CENPCQ03188 943 aa13.32□□□□□ -0.28
SRSF1-204ENST00000581979 TUBB2AQ13885 445 aa13.32□□□□□ -0.28
SRSF1-204ENST00000581979 CBX2Q14781 532 aaPredicted RBP13.32□□□□□ -0.28
SRSF1-204ENST00000581979 SYCE2Q6PIF2 218 aa13.32□□□□□ -0.28
SRSF1-204ENST00000581979 RNF135Q8IUD6 432 aa13.32□□□□□ -0.28
SRSF1-204ENST00000581979 SLC4A11Q8NBS3 891 aa13.32□□□□□ -0.28
SRSF1-204ENST00000581979 MYRIPQ8NFW9 859 aa13.32□□□□□ -0.28
SRSF1-204ENST00000581979 TPCN2Q8NHX9 752 aa13.32□□□□□ -0.28
SRSF1-204ENST00000581979 CASP10Q92851 521 aa13.32□□□□□ -0.28
SRSF1-204ENST00000581979 TRIM11Q96F44 468 aa13.32□□□□□ -0.28
SRSF1-204ENST00000581979 HEXIM2Q96MH2 286 aaKnown RBP13.32□□□□□ -0.28
SRSF1-204ENST00000581979 TMEM175Q9BSA9 504 aa13.32□□□□□ -0.28
SRSF1-204ENST00000581979 TUBB2BQ9BVA1 445 aa13.32□□□□□ -0.28
SRSF1-204ENST00000581979 PHF7Q9BWX1 381 aaPredicted RBP13.32□□□□□ -0.28
SRSF1-204ENST00000581979 NT5C1AQ9BXI3 368 aa13.32□□□□□ -0.28
SRSF1-204ENST00000581979 CTTNBP2NLQ9P2B4 639 aa13.32□□□□□ -0.28
SRSF1-204ENST00000581979 STK39Q9UEW8 545 aa13.32□□□□□ -0.28
SRSF1-204ENST00000581979 CEP83Q9Y592 693 aa13.32□□□□□ -0.28
SRSF1-204ENST00000581979 HCFC2Q9Y5Z7 792 aa13.32□□□□□ -0.28
SRSF1-204ENST00000581979 MRFAP1Q9Y605 127 aa13.32□□□□□ -0.28
SRSF1-204ENST00000581979 FAM86C2PA6NEL3 165 aa13.31□□□□□ -0.28
SRSF1-204ENST00000581979 PRR33A8MZF0 331 aa13.31□□□□□ -0.28
SRSF1-204ENST00000581979 ATMINO43313 823 aaPredicted RBP13.31□□□□□ -0.28
SRSF1-204ENST00000581979 CLASP2O75122 1294 aaKnown RBP13.31□□□□□ -0.28
SRSF1-204ENST00000581979 SLU7O95391 586 aaKnown RBP13.31□□□□□ -0.28
SRSF1-204ENST00000581979 CXCL14O95715 111 aa13.31□□□□□ -0.28
SRSF1-204ENST00000581979 ALDH2P05091 517 aa13.31□□□□□ -0.28
SRSF1-204ENST00000581979 VDRP11473 427 aa13.31□□□□□ -0.28
SRSF1-204ENST00000581979 TERF1P54274 439 aa13.31□□□□□ -0.28
SRSF1-204ENST00000581979 TMEM35BQ8NCS4 154 aa13.31□□□□□ -0.28
SRSF1-204ENST00000581979 OR6B3Q8NGW1 331 aa13.31□□□□□ -0.28
SRSF1-204ENST00000581979 TFAP2BQ92481 460 aa13.31□□□□□ -0.28
SRSF1-204ENST00000581979 CALR3Q96L12 384 aaKnown RBP13.31□□□□□ -0.28
SRSF1-204ENST00000581979 ZSWIM1Q9BR11 485 aa13.31□□□□□ -0.28
SRSF1-204ENST00000581979 MRPL45Q9BRJ2 306 aaKnown RBP13.31□□□□□ -0.28
SRSF1-204ENST00000581979 VN1R3Q9BXE9 311 aa13.31□□□□□ -0.28
SRSF1-204ENST00000581979 GDAP2Q9NXN4 497 aa13.31□□□□□ -0.28
SRSF1-204ENST00000581979 CNOT8Q9UFF9 292 aaKnown RBP13.31□□□□□ -0.28
SRSF1-204ENST00000581979 CDC23Q9UJX2 597 aa13.31□□□□□ -0.28
SRSF1-204ENST00000581979 GTF3C4Q9UKN8 822 aa13.31□□□□□ -0.28
SRSF1-204ENST00000581979 PCDHGC3Q9UN70 934 aa13.31□□□□□ -0.28
SRSF1-204ENST00000581979 ARIH1Q9Y4X5 557 aaPredicted RBP13.31□□□□□ -0.28
SRSF1-204ENST00000581979 SAR1BQ9Y6B6 198 aa13.31□□□□□ -0.28
SRSF1-204ENST00000581979 TRIOO75962 3097 aa13.31□□□□□ -0.28
SRSF1-204ENST00000581979 PODXLO00592 558 aa13.3□□□□□ -0.28
SRSF1-204ENST00000581979 SPTLC1O15269 473 aa13.3□□□□□ -0.28
SRSF1-204ENST00000581979 LSM8O95777 96 aaKnown RBP13.3□□□□□ -0.28
SRSF1-204ENST00000581979 FTCDO95954 541 aa13.3□□□□□ -0.28
SRSF1-204ENST00000581979 POMCP01189 267 aa13.3□□□□□ -0.28
SRSF1-204ENST00000581979 MYBL1P10243 752 aa13.3□□□□□ -0.28
SRSF1-204ENST00000581979 LILRA4P59901 499 aa13.3□□□□□ -0.28
SRSF1-204ENST00000581979 GRIK3Q13003 919 aa13.3□□□□□ -0.28
SRSF1-204ENST00000581979 SOWAHAQ2M3V2 549 aa13.3□□□□□ -0.28
SRSF1-204ENST00000581979 PAPD7Q5XG87 772 aaKnown RBP13.3□□□□□ -0.28
SRSF1-204ENST00000581979 LLGL2Q6P1M3 1020 aa13.3□□□□□ -0.28
SRSF1-204ENST00000581979 DPH6Q7L8W6 267 aa13.3□□□□□ -0.28
SRSF1-204ENST00000581979 DAAM2Q86T65 1068 aa13.3□□□□□ -0.28
SRSF1-204ENST00000581979 MCOLN2Q8IZK6 566 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms