RNA–Protein interactions for RNA: ENST00000580670.6

CDK5RAP3-219, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,768 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-219ENST00000580670 IFI16Q16666 785 aaKnown RBP14.62□□□□□ -0.07
CDK5RAP3-219ENST00000580670 USP41Q3LFD5 358 aa14.62□□□□□ -0.07
CDK5RAP3-219ENST00000580670 RTP2Q5QGT7 225 aa14.62□□□□□ -0.07
CDK5RAP3-219ENST00000580670 CYP4A22Q5TCH4 519 aa14.62□□□□□ -0.07
CDK5RAP3-219ENST00000580670 PMF1Q6P1K2 205 aa14.62□□□□□ -0.07
CDK5RAP3-219ENST00000580670 LLGL2Q6P1M3 1020 aa14.62□□□□□ -0.07
CDK5RAP3-219ENST00000580670 FAM35AQ86V20 835 aa14.62□□□□□ -0.07
CDK5RAP3-219ENST00000580670 LRRTM3Q86VH5 581 aa14.62□□□□□ -0.07
CDK5RAP3-219ENST00000580670 SLC35F6Q8N357 371 aa14.62□□□□□ -0.07
CDK5RAP3-219ENST00000580670 SLC35F5Q8WV83 523 aa14.62□□□□□ -0.07
CDK5RAP3-219ENST00000580670 ZNF592Q92610 1267 aa14.62□□□□□ -0.07
CDK5RAP3-219ENST00000580670 ALS2CR12Q96Q35 445 aa14.62□□□□□ -0.07
CDK5RAP3-219ENST00000580670 NUP85Q9BW27 656 aa14.62□□□□□ -0.07
CDK5RAP3-219ENST00000580670 VN1R3Q9BXE9 311 aa14.62□□□□□ -0.07
CDK5RAP3-219ENST00000580670 DUSP16Q9BY84 665 aa14.62□□□□□ -0.07
CDK5RAP3-219ENST00000580670 AVENQ9NQS1 362 aaPredicted RBP14.62□□□□□ -0.07
CDK5RAP3-219ENST00000580670 KRT82Q9NSB4 513 aa14.62□□□□□ -0.07
CDK5RAP3-219ENST00000580670 TMLHEQ9NVH6 421 aa14.62□□□□□ -0.07
CDK5RAP3-219ENST00000580670 PCDHB12Q9Y5F1 795 aa14.62□□□□□ -0.07
CDK5RAP3-219ENST00000580670 OR6C75A6NL08 312 aa14.62□□□□□ -0.07
CDK5RAP3-219ENST00000580670 H7C4K7 107 aa14.62□□□□□ -0.07
CDK5RAP3-219ENST00000580670 TULP2O00295 520 aa14.62□□□□□ -0.07
CDK5RAP3-219ENST00000580670 ERBB2P04626 1255 aa14.62□□□□□ -0.07
CDK5RAP3-219ENST00000580670 OR4Q2P0C623 313 aa14.62□□□□□ -0.07
CDK5RAP3-219ENST00000580670 FAM200BP0CF97 657 aa14.62□□□□□ -0.07
CDK5RAP3-219ENST00000580670 NPR3P17342 541 aa14.62□□□□□ -0.07
CDK5RAP3-219ENST00000580670 RGS7P49802 495 aa14.62□□□□□ -0.07
CDK5RAP3-219ENST00000580670 TCEAL1Q15170 157 aa14.62□□□□□ -0.07
CDK5RAP3-219ENST00000580670 RASIP1Q5U651 963 aa14.62□□□□□ -0.07
CDK5RAP3-219ENST00000580670 ANKS3Q6ZW76 656 aa14.62□□□□□ -0.07
CDK5RAP3-219ENST00000580670 RNF168Q8IYW5 571 aaPredicted RBP14.62□□□□□ -0.07
CDK5RAP3-219ENST00000580670 DCP1BQ8IZD4 617 aaKnown RBP14.62□□□□□ -0.07
CDK5RAP3-219ENST00000580670 TRIM58Q8NG06 486 aa14.62□□□□□ -0.07
CDK5RAP3-219ENST00000580670 IPO4Q8TEX9 1081 aaKnown RBP14.62□□□□□ -0.07
CDK5RAP3-219ENST00000580670 C18orf8Q96DM3 657 aa14.62□□□□□ -0.07
CDK5RAP3-219ENST00000580670 ZCWPW1Q9H0M4 648 aa14.62□□□□□ -0.07
CDK5RAP3-219ENST00000580670 UVRAGQ9P2Y5 699 aa14.62□□□□□ -0.07
CDK5RAP3-219ENST00000580670 TJP2Q9UDY2 1190 aa14.62□□□□□ -0.07
CDK5RAP3-219ENST00000580670 STRIP2Q9ULQ0 834 aa14.62□□□□□ -0.07
CDK5RAP3-219ENST00000580670 COG5Q9UP83 839 aa14.62□□□□□ -0.07
CDK5RAP3-219ENST00000580670 AP1G2O75843 785 aa14.61□□□□□ -0.07
CDK5RAP3-219ENST00000580670 PPM1AP35813 382 aa14.61□□□□□ -0.07
CDK5RAP3-219ENST00000580670 SLC39A12Q504Y0 691 aa14.61□□□□□ -0.07
CDK5RAP3-219ENST00000580670 C9orf50Q5SZB4 431 aa14.61□□□□□ -0.07
CDK5RAP3-219ENST00000580670 KIAA1841Q6NSI8 718 aa14.61□□□□□ -0.07
CDK5RAP3-219ENST00000580670 TPCN2Q8NHX9 752 aa14.61□□□□□ -0.07
CDK5RAP3-219ENST00000580670 ZNF564Q8TBZ8 553 aaPredicted RBP14.61□□□□□ -0.07
CDK5RAP3-219ENST00000580670 STK32AQ8WU08 396 aa14.61□□□□□ -0.07
CDK5RAP3-219ENST00000580670 SMARCD1Q96GM5 515 aa14.61□□□□□ -0.07
CDK5RAP3-219ENST00000580670 MIS12Q9H081 205 aa14.61□□□□□ -0.07
CDK5RAP3-219ENST00000580670 KIAA1671Q9BY89 1806 aa14.61□□□□□ -0.07
CDK5RAP3-219ENST00000580670 MYH10P35580 1976 aa14.61□□□□□ -0.07
CDK5RAP3-219ENST00000580670 LCHNA4D1U4 455 aa14.6□□□□□ -0.07
CDK5RAP3-219ENST00000580670 GRID2IPA4D2P6 1211 aa14.6□□□□□ -0.07
CDK5RAP3-219ENST00000580670 E5RJQ4 531 aa14.6□□□□□ -0.07
CDK5RAP3-219ENST00000580670 PIK3R2O00459 728 aa14.6□□□□□ -0.07
CDK5RAP3-219ENST00000580670 XPO1O14980 1071 aaKnown RBP14.6□□□□□ -0.07
CDK5RAP3-219ENST00000580670 PALMO75781 387 aa14.6□□□□□ -0.07
CDK5RAP3-219ENST00000580670 SOD2P04179 222 aa14.6□□□□□ -0.07
CDK5RAP3-219ENST00000580670 BDNFP23560 247 aa14.6□□□□□ -0.07
CDK5RAP3-219ENST00000580670 CASQ1P31415 396 aa14.6□□□□□ -0.07
CDK5RAP3-219ENST00000580670 PLA2G4AP47712 749 aa14.6□□□□□ -0.07
CDK5RAP3-219ENST00000580670 GABRB2P47870 512 aa14.6□□□□□ -0.07
CDK5RAP3-219ENST00000580670 GABPB1Q06547 395 aaPredicted RBP14.6□□□□□ -0.07
CDK5RAP3-219ENST00000580670 MAMLD1Q13495 774 aa14.6□□□□□ -0.07
CDK5RAP3-219ENST00000580670 PLEKHA7Q6IQ23 1121 aa14.6□□□□□ -0.07
CDK5RAP3-219ENST00000580670 PRSS55Q6UWB4 352 aaPredicted RBP14.6□□□□□ -0.07
CDK5RAP3-219ENST00000580670 C4orf50Q6ZRC1 276 aa14.6□□□□□ -0.07
CDK5RAP3-219ENST00000580670 CLEC20AQ6ZU45 233 aa14.6□□□□□ -0.07
CDK5RAP3-219ENST00000580670 DDX53Q86TM3 631 aaKnown RBP14.6□□□□□ -0.07
CDK5RAP3-219ENST00000580670 SPATA2LQ8IUW3 424 aaPredicted RBP14.6□□□□□ -0.07
CDK5RAP3-219ENST00000580670 SP7Q8TDD2 431 aaPredicted RBP14.6□□□□□ -0.07
CDK5RAP3-219ENST00000580670 RIN2Q8WYP3 895 aaPredicted RBP14.6□□□□□ -0.07
CDK5RAP3-219ENST00000580670 CLP1Q92989 425 aaKnown RBP14.6□□□□□ -0.07
CDK5RAP3-219ENST00000580670 RNPC3Q96LT9 517 aaKnown RBP14.6□□□□□ -0.07
CDK5RAP3-219ENST00000580670 SLC4A5Q9BY07 1137 aa14.6□□□□□ -0.07
CDK5RAP3-219ENST00000580670 RHOBTB2Q9BYZ6 727 aa14.6□□□□□ -0.07
CDK5RAP3-219ENST00000580670 MRPL47Q9HD33 250 aaKnown RBP14.6□□□□□ -0.07
CDK5RAP3-219ENST00000580670 PARVAQ9NVD7 372 aa14.6□□□□□ -0.07
CDK5RAP3-219ENST00000580670 PCDHGC5Q9Y5F6 944 aa14.6□□□□□ -0.07
CDK5RAP3-219ENST00000580670 SCINQ9Y6U3 715 aa14.6□□□□□ -0.07
CDK5RAP3-219ENST00000580670 TBC1D4O60343 1298 aa14.6□□□□□ -0.07
CDK5RAP3-219ENST00000580670 BEST1O76090 585 aa14.6□□□□□ -0.07
CDK5RAP3-219ENST00000580670 MTA2O94776 668 aa14.6□□□□□ -0.07
CDK5RAP3-219ENST00000580670 LINC00271P0C7V0 271 aa14.6□□□□□ -0.07
CDK5RAP3-219ENST00000580670 RABGGTBP53611 331 aa14.6□□□□□ -0.07
CDK5RAP3-219ENST00000580670 HADHBP55084 474 aaKnown RBP14.6□□□□□ -0.07
CDK5RAP3-219ENST00000580670 ARPP19P56211 112 aa14.6□□□□□ -0.07
CDK5RAP3-219ENST00000580670 MAP3K7CLP57077 242 aa14.6□□□□□ -0.07
CDK5RAP3-219ENST00000580670 SNX16P57768 344 aa14.6□□□□□ -0.07
CDK5RAP3-219ENST00000580670 ZNF268Q14587 947 aaPredicted RBP14.6□□□□□ -0.07
CDK5RAP3-219ENST00000580670 DNAJC24Q6P3W2 148 aa14.6□□□□□ -0.07
CDK5RAP3-219ENST00000580670 XYLT1Q86Y38 959 aa14.6□□□□□ -0.07
CDK5RAP3-219ENST00000580670 C3orf20Q8ND61 904 aa14.6□□□□□ -0.07
CDK5RAP3-219ENST00000580670 KIF18AQ8NI77 898 aa14.6□□□□□ -0.07
CDK5RAP3-219ENST00000580670 CALR3Q96L12 384 aaKnown RBP14.6□□□□□ -0.07
CDK5RAP3-219ENST00000580670 SMOQ99835 787 aa14.6□□□□□ -0.07
CDK5RAP3-219ENST00000580670 HERC2P3Q9BVR0 1158 aa14.6□□□□□ -0.07
CDK5RAP3-219ENST00000580670 OXCT2Q9BYC2 517 aaPredicted RBP14.6□□□□□ -0.07
CDK5RAP3-219ENST00000580670 CHST7Q9NS84 486 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms