RNA–Protein interactions for RNA: ENST00000580095.5

TOP3A-209, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 1 (best)

Gene TOP3A, Length 2,929 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-209ENST00000580095 RGS7P49802 495 aa11.01□□□□□ -0.65
TOP3A-209ENST00000580095 BASP1P80723 227 aaKnown RBP11.01□□□□□ -0.65
TOP3A-209ENST00000580095 SLC25A11Q02978 314 aaKnown RBP11.01□□□□□ -0.65
TOP3A-209ENST00000580095 TTLL12Q14166 644 aaPredicted RBP11.01□□□□□ -0.65
TOP3A-209ENST00000580095 PIGHQ14442 188 aaPredicted RBP11.01□□□□□ -0.65
TOP3A-209ENST00000580095 C1QTNF12Q5T7M4 302 aa11.01□□□□□ -0.65
TOP3A-209ENST00000580095 ANKLE1Q8NAG6 615 aa11.01□□□□□ -0.65
TOP3A-209ENST00000580095 ANKRD36BP1Q96IX9 119 aa11.01□□□□□ -0.65
TOP3A-209ENST00000580095 FGD4Q96M96 766 aa11.01□□□□□ -0.65
TOP3A-209ENST00000580095 HEXIM2Q96MH2 286 aaKnown RBP11.01□□□□□ -0.65
TOP3A-209ENST00000580095 LPIN3Q9BQK8 851 aa11.01□□□□□ -0.65
TOP3A-209ENST00000580095 MAK16Q9BXY0 300 aaKnown RBP11.01□□□□□ -0.65
TOP3A-209ENST00000580095 EURLQ9NYK6 297 aa11.01□□□□□ -0.65
TOP3A-209ENST00000580095 LGALS13Q9UHV8 139 aa11.01□□□□□ -0.65
TOP3A-209ENST00000580095 CSADQ9Y600 493 aa11.01□□□□□ -0.65
TOP3A-209ENST00000580095 A0A087WZ62 844 aa11.01□□□□□ -0.65
TOP3A-209ENST00000580095 TMEM63AO94886 807 aa11.01□□□□□ -0.65
TOP3A-209ENST00000580095 TXNP10599 105 aaKnown RBP11.01□□□□□ -0.65
TOP3A-209ENST00000580095 KRT4P19013 534 aa11.01□□□□□ -0.65
TOP3A-209ENST00000580095 MIPP30301 263 aa11.01□□□□□ -0.65
TOP3A-209ENST00000580095 RPL22P35268 128 aaKnown RBP11.01□□□□□ -0.65
TOP3A-209ENST00000580095 ATP11AP98196 1134 aa11.01□□□□□ -0.65
TOP3A-209ENST00000580095 HIF1AQ16665 826 aa11.01□□□□□ -0.65
TOP3A-209ENST00000580095 ZNF667Q5HYK9 610 aa11.01□□□□□ -0.65
TOP3A-209ENST00000580095 FAXCQ5TGI0 409 aa11.01□□□□□ -0.65
TOP3A-209ENST00000580095 ARHGEF18Q6ZSZ5 1173 aa11.01□□□□□ -0.65
TOP3A-209ENST00000580095 ECHDC2Q86YB7 292 aa11.01□□□□□ -0.65
TOP3A-209ENST00000580095 BBOF1Q8ND07 529 aa11.01□□□□□ -0.65
TOP3A-209ENST00000580095 CPT1BQ92523 772 aa11.01□□□□□ -0.65
TOP3A-209ENST00000580095 FAM210AQ96ND0 272 aa11.01□□□□□ -0.65
TOP3A-209ENST00000580095 FDXACB1Q9BRP7 624 aaPredicted RBP11.01□□□□□ -0.65
TOP3A-209ENST00000580095 RPF1Q9H9Y2 349 aaKnown RBP11.01□□□□□ -0.65
TOP3A-209ENST00000580095 CLUHO75153 1309 aa11.01□□□□□ -0.65
TOP3A-209ENST00000580095 PARP14Q460N5 1801 aa11.01□□□□□ -0.65
TOP3A-209ENST00000580095 DOCK1Q14185 1865 aa11□□□□□ -0.65
TOP3A-209ENST00000580095 DNAJC8O75937 253 aaPredicted RBP11□□□□□ -0.65
TOP3A-209ENST00000580095 LSM8O95777 96 aaKnown RBP11□□□□□ -0.65
TOP3A-209ENST00000580095 STAG3L1P0CL83 205 aa11□□□□□ -0.65
TOP3A-209ENST00000580095 EIF4BP23588 611 aaKnown RBP11□□□□□ -0.65
TOP3A-209ENST00000580095 ENPEPQ07075 957 aa11□□□□□ -0.65
TOP3A-209ENST00000580095 MTA1Q13330 715 aa11□□□□□ -0.65
TOP3A-209ENST00000580095 CELF3Q5SZQ8 465 aaKnown RBP11□□□□□ -0.65
TOP3A-209ENST00000580095 FAM102AQ5T9C2 384 aaPredicted RBP11□□□□□ -0.65
TOP3A-209ENST00000580095 MAP1SQ66K74 1059 aaPredicted RBP11□□□□□ -0.65
TOP3A-209ENST00000580095 C1orf228Q6PIY5 440 aa11□□□□□ -0.65
TOP3A-209ENST00000580095 C3orf62Q6ZUJ4 267 aa11□□□□□ -0.65
TOP3A-209ENST00000580095 IGDCC3Q8IVU1 814 aa11□□□□□ -0.65
TOP3A-209ENST00000580095 SLC4A11Q8NBS3 891 aa11□□□□□ -0.65
TOP3A-209ENST00000580095 SLC35B2Q8TB61 432 aa11□□□□□ -0.65
TOP3A-209ENST00000580095 RSAD2Q8WXG1 361 aa11□□□□□ -0.65
TOP3A-209ENST00000580095 CHMP2BQ9UQN3 213 aa11□□□□□ -0.65
TOP3A-209ENST00000580095 LCTP09848 1927 aa11□□□□□ -0.65
TOP3A-209ENST00000580095 F5H423 210 aaPredicted RBP11□□□□□ -0.65
TOP3A-209ENST00000580095 TCEA3O75764 348 aa11□□□□□ -0.65
TOP3A-209ENST00000580095 MICAL2O94851 1124 aa11□□□□□ -0.65
TOP3A-209ENST00000580095 KRT16P08779 473 aa11□□□□□ -0.65
TOP3A-209ENST00000580095 ZNF286BP0CG31 522 aa11□□□□□ -0.65
TOP3A-209ENST00000580095 GHRP10912 638 aa11□□□□□ -0.65
TOP3A-209ENST00000580095 KDELR1P24390 212 aa11□□□□□ -0.65
TOP3A-209ENST00000580095 POLR2BP30876 1174 aaKnown RBP11□□□□□ -0.65
TOP3A-209ENST00000580095 ABCD1P33897 745 aa11□□□□□ -0.65
TOP3A-209ENST00000580095 RDXP35241 583 aaKnown RBP11□□□□□ -0.65
TOP3A-209ENST00000580095 LMNB2Q03252 620 aa11□□□□□ -0.65
TOP3A-209ENST00000580095 TMEM62Q0P6H9 643 aa11□□□□□ -0.65
TOP3A-209ENST00000580095 OVGP1Q12889 678 aa11□□□□□ -0.65
TOP3A-209ENST00000580095 MYO1EQ12965 1108 aa11□□□□□ -0.65
TOP3A-209ENST00000580095 MXD4Q14582 209 aaPredicted RBP11□□□□□ -0.65
TOP3A-209ENST00000580095 CDCA2Q69YH5 1023 aaPredicted RBP11□□□□□ -0.65
TOP3A-209ENST00000580095 SCYL2Q6P3W7 929 aa11□□□□□ -0.65
TOP3A-209ENST00000580095 XYLT1Q86Y38 959 aa11□□□□□ -0.65
TOP3A-209ENST00000580095 PYROXD1Q8WU10 500 aa11□□□□□ -0.65
TOP3A-209ENST00000580095 KLHL29Q96CT2 875 aa11□□□□□ -0.65
TOP3A-209ENST00000580095 TMEM237Q96Q45 408 aa11□□□□□ -0.65
TOP3A-209ENST00000580095 PEBP4Q96S96 227 aa11□□□□□ -0.65
TOP3A-209ENST00000580095 SGIP1Q9BQI5 828 aa11□□□□□ -0.65
TOP3A-209ENST00000580095 MAGEB5Q9BZ81 275 aa11□□□□□ -0.65
TOP3A-209ENST00000580095 PTPRHQ9HD43 1115 aa11□□□□□ -0.65
TOP3A-209ENST00000580095 ARL2BPQ9Y2Y0 163 aa11□□□□□ -0.65
TOP3A-209ENST00000580095 ACKR2O00590 384 aa10.99□□□□□ -0.65
TOP3A-209ENST00000580095 CHUKO15111 745 aa10.99□□□□□ -0.65
TOP3A-209ENST00000580095 CNMDO75829 334 aa10.99□□□□□ -0.65
TOP3A-209ENST00000580095 ATP6V1G2O95670 118 aa10.99□□□□□ -0.65
TOP3A-209ENST00000580095 YWHAEP62258 255 aaKnown RBP10.99□□□□□ -0.65
TOP3A-209ENST00000580095 MBTD1Q05BQ5 628 aa10.99□□□□□ -0.65
TOP3A-209ENST00000580095 MORF4L2Q15014 288 aa10.99□□□□□ -0.65
TOP3A-209ENST00000580095 SMAD1Q15797 465 aaKnown RBP10.99□□□□□ -0.65
TOP3A-209ENST00000580095 ACCSLQ4AC99 568 aa10.99□□□□□ -0.65
TOP3A-209ENST00000580095 TRNP1Q6NT89 227 aa10.99□□□□□ -0.65
TOP3A-209ENST00000580095 TSHZ1Q6ZSZ6 1077 aa10.99□□□□□ -0.65
TOP3A-209ENST00000580095 CENPUQ71F23 418 aa10.99□□□□□ -0.65
TOP3A-209ENST00000580095 FBXO36Q8NEA4 188 aa10.99□□□□□ -0.65
TOP3A-209ENST00000580095 FBF1Q8TES7 1133 aa10.99□□□□□ -0.65
TOP3A-209ENST00000580095 MAGEB18Q96M61 343 aa10.99□□□□□ -0.65
TOP3A-209ENST00000580095 SMC6Q96SB8 1091 aa10.99□□□□□ -0.65
TOP3A-209ENST00000580095 TRIM56Q9BRZ2 755 aaKnown RBP10.99□□□□□ -0.65
TOP3A-209ENST00000580095 NOD2Q9HC29 1040 aa10.99□□□□□ -0.65
TOP3A-209ENST00000580095 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.99□□□□□ -0.65
TOP3A-209ENST00000580095 RBPJLQ9UBG7 517 aa10.99□□□□□ -0.65
TOP3A-209ENST00000580095 AKT3Q9Y243 479 aa10.99□□□□□ -0.65
TOP3A-209ENST00000580095 POLR2AP24928 1970 aaKnown RBP10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms