RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 LIG4P49917 911 aa4.11□□□□□ -1.75
SMARCE1-215ENST00000578995 GUCY2FP51841 1108 aa4.11□□□□□ -1.75
SMARCE1-215ENST00000578995 SEC13P55735 322 aa4.11□□□□□ -1.75
SMARCE1-215ENST00000578995 DLG4P78352 724 aa4.11□□□□□ -1.75
SMARCE1-215ENST00000578995 ENPEPQ07075 957 aa4.11□□□□□ -1.75
SMARCE1-215ENST00000578995 CYP24A1Q07973 514 aa4.11□□□□□ -1.75
SMARCE1-215ENST00000578995 GRIK3Q13003 919 aa4.11□□□□□ -1.75
SMARCE1-215ENST00000578995 STRN3Q13033 797 aa4.11□□□□□ -1.75
SMARCE1-215ENST00000578995 PSMD6Q15008 389 aa4.11□□□□□ -1.75
SMARCE1-215ENST00000578995 EDRF1Q3B7T1 1238 aa4.11□□□□□ -1.75
SMARCE1-215ENST00000578995 PAN2Q504Q3 1202 aaKnown RBP4.11□□□□□ -1.75
SMARCE1-215ENST00000578995 NOMO2Q5JPE7 1267 aa4.11□□□□□ -1.75
SMARCE1-215ENST00000578995 GLRA4Q5JXX5 417 aa4.11□□□□□ -1.75
SMARCE1-215ENST00000578995 CCDC183Q5T5S1 534 aa4.11□□□□□ -1.75
SMARCE1-215ENST00000578995 TTC39BQ5VTQ0 682 aaPredicted RBP4.11□□□□□ -1.75
SMARCE1-215ENST00000578995 SPATA1Q5VX52 437 aa4.11□□□□□ -1.75
SMARCE1-215ENST00000578995 ISM2Q6H9L7 571 aa4.11□□□□□ -1.75
SMARCE1-215ENST00000578995 SLFN12LQ6IEE8 588 aa4.11□□□□□ -1.75
SMARCE1-215ENST00000578995 ATG14Q6ZNE5 492 aa4.11□□□□□ -1.75
SMARCE1-215ENST00000578995 LIMS2Q7Z4I7 341 aa4.11□□□□□ -1.75
SMARCE1-215ENST00000578995 THNSL1Q8IYQ7 743 aa4.11□□□□□ -1.75
SMARCE1-215ENST00000578995 LRRC43Q8N309 656 aa4.11□□□□□ -1.75
SMARCE1-215ENST00000578995 GPD1LQ8N335 351 aa4.11□□□□□ -1.75
SMARCE1-215ENST00000578995 COLGALT1Q8NBJ5 622 aa4.11□□□□□ -1.75
SMARCE1-215ENST00000578995 OR5B17Q8NGF7 314 aa4.11□□□□□ -1.75
SMARCE1-215ENST00000578995 RSPH1Q8WYR4 309 aa4.11□□□□□ -1.75
SMARCE1-215ENST00000578995 P2RX5Q93086 422 aa4.11□□□□□ -1.75
SMARCE1-215ENST00000578995 C18orf25Q96B23 403 aaPredicted RBP4.11□□□□□ -1.75
SMARCE1-215ENST00000578995 HINFPQ9BQA5 517 aa4.11□□□□□ -1.75
SMARCE1-215ENST00000578995 MSTO1Q9BUK6 570 aa4.11□□□□□ -1.75
SMARCE1-215ENST00000578995 SEMA6CQ9H3T2 930 aa4.11□□□□□ -1.75
SMARCE1-215ENST00000578995 PLEKHA5Q9HAU0 1116 aa4.11□□□□□ -1.75
SMARCE1-215ENST00000578995 PDE11AQ9HCR9 933 aa4.11□□□□□ -1.75
SMARCE1-215ENST00000578995 TOPORSQ9NS56 1045 aaPredicted RBP4.11□□□□□ -1.75
SMARCE1-215ENST00000578995 RMND1Q9NWS8 449 aa4.11□□□□□ -1.75
SMARCE1-215ENST00000578995 CGNQ9P2M7 1197 aaKnown RBP4.11□□□□□ -1.75
SMARCE1-215ENST00000578995 TUBGCP4Q9UGJ1 667 aa4.11□□□□□ -1.75
SMARCE1-215ENST00000578995 SIX4Q9UIU6 781 aa4.11□□□□□ -1.75
SMARCE1-215ENST00000578995 AGO2Q9UKV8 859 aaKnown RBP4.11□□□□□ -1.75
SMARCE1-215ENST00000578995 INSL6Q9Y581 213 aa4.11□□□□□ -1.75
SMARCE1-215ENST00000578995 NME7Q9Y5B8 376 aa4.11□□□□□ -1.75
SMARCE1-215ENST00000578995 SPTBN5Q9NRC6 3674 aaKnown RBP4.1□□□□□ -1.75
SMARCE1-215ENST00000578995 NYNRINQ9P2P1 1898 aaKnown RBP4.1□□□□□ -1.75
SMARCE1-215ENST00000578995 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP4.1□□□□□ -1.75
SMARCE1-215ENST00000578995 LRRIQ3A6PVS8 624 aaPredicted RBP4.1□□□□□ -1.75
SMARCE1-215ENST00000578995 TBKBP1A7MCY6 615 aa4.1□□□□□ -1.75
SMARCE1-215ENST00000578995 H3BNC9 293 aa4.1□□□□□ -1.75
SMARCE1-215ENST00000578995 RFXAPO00287 272 aa4.1□□□□□ -1.75
SMARCE1-215ENST00000578995 PIRO00625 290 aa4.1□□□□□ -1.75
SMARCE1-215ENST00000578995 NRP1O14786 923 aa4.1□□□□□ -1.75
SMARCE1-215ENST00000578995 KIAA0391O15091 583 aaKnown RBP4.1□□□□□ -1.75
SMARCE1-215ENST00000578995 GRM6O15303 877 aa4.1□□□□□ -1.75
SMARCE1-215ENST00000578995 TBC1D4O60343 1298 aa4.1□□□□□ -1.75
SMARCE1-215ENST00000578995 DKK1O94907 266 aa4.1□□□□□ -1.75
SMARCE1-215ENST00000578995 SMC2O95347 1197 aa4.1□□□□□ -1.75
SMARCE1-215ENST00000578995 VNN1O95497 513 aa4.1□□□□□ -1.75
SMARCE1-215ENST00000578995 POMCP01189 267 aa4.1□□□□□ -1.75
SMARCE1-215ENST00000578995 C4BPAP04003 597 aaKnown RBP4.1□□□□□ -1.75
SMARCE1-215ENST00000578995 ADRB1P08588 477 aa4.1□□□□□ -1.75
SMARCE1-215ENST00000578995 MED14OSP0DP75 135 aa4.1□□□□□ -1.75
SMARCE1-215ENST00000578995 HARSP12081 509 aaKnown RBP4.1□□□□□ -1.75
SMARCE1-215ENST00000578995 ZNF18P17022 549 aa4.1□□□□□ -1.75
SMARCE1-215ENST00000578995 RAB6AP20340 208 aa4.1□□□□□ -1.75
SMARCE1-215ENST00000578995 CYP3A5P20815 502 aa4.1□□□□□ -1.75
SMARCE1-215ENST00000578995 NR2F2P24468 414 aa4.1□□□□□ -1.75
SMARCE1-215ENST00000578995 BMPR1AP36894 532 aa4.1□□□□□ -1.75
SMARCE1-215ENST00000578995 BCAR1P56945 870 aa4.1□□□□□ -1.75
SMARCE1-215ENST00000578995 OSTNP61366 133 aa4.1□□□□□ -1.75
SMARCE1-215ENST00000578995 NFKB2Q00653 900 aa4.1□□□□□ -1.75
SMARCE1-215ENST00000578995 PLCB3Q01970 1234 aa4.1□□□□□ -1.75
SMARCE1-215ENST00000578995 LRRC63Q05C16 580 aa4.1□□□□□ -1.75
SMARCE1-215ENST00000578995 SPAG1Q07617 926 aa4.1□□□□□ -1.75
SMARCE1-215ENST00000578995 PPP3CAQ08209 521 aa4.1□□□□□ -1.75
SMARCE1-215ENST00000578995 TUSC3Q13454 348 aa4.1□□□□□ -1.75
SMARCE1-215ENST00000578995 KCNC3Q14003 757 aa4.1□□□□□ -1.75
SMARCE1-215ENST00000578995 IQCB1Q15051 598 aa4.1□□□□□ -1.75
SMARCE1-215ENST00000578995 RAB30Q15771 203 aa4.1□□□□□ -1.75
SMARCE1-215ENST00000578995 SNRNP35Q16560 246 aaKnown RBP4.1□□□□□ -1.75
SMARCE1-215ENST00000578995 IFI16Q16666 785 aaKnown RBP4.1□□□□□ -1.75
SMARCE1-215ENST00000578995 UPP1Q16831 310 aa4.1□□□□□ -1.75
SMARCE1-215ENST00000578995 EPC2Q52LR7 807 aa4.1□□□□□ -1.75
SMARCE1-215ENST00000578995 MIIPQ5JXC2 388 aa4.1□□□□□ -1.75
SMARCE1-215ENST00000578995 CDKAL1Q5VV42 579 aa4.1□□□□□ -1.75
SMARCE1-215ENST00000578995 JADE1Q6IE81 842 aa4.1□□□□□ -1.75
SMARCE1-215ENST00000578995 CAVIN1Q6NZI2 390 aaKnown RBP4.1□□□□□ -1.75
SMARCE1-215ENST00000578995 ARMCX5Q6P1M9 558 aa4.1□□□□□ -1.75
SMARCE1-215ENST00000578995 KCNT2Q6UVM3 1135 aa4.1□□□□□ -1.75
SMARCE1-215ENST00000578995 GLB1LQ6UWU2 654 aa4.1□□□□□ -1.75
SMARCE1-215ENST00000578995 Q7L0L9 218 aa4.1□□□□□ -1.75
SMARCE1-215ENST00000578995 TRIM59Q8IWR1 403 aa4.1□□□□□ -1.75
SMARCE1-215ENST00000578995 C1orf127Q8N9H9 656 aa4.1□□□□□ -1.75
SMARCE1-215ENST00000578995 MLKLQ8NB16 471 aa4.1□□□□□ -1.75
SMARCE1-215ENST00000578995 XXYLT1Q8NBI6 393 aa4.1□□□□□ -1.75
SMARCE1-215ENST00000578995 LMO3Q8TAP4 145 aa4.1□□□□□ -1.75
SMARCE1-215ENST00000578995 SPPL3Q8TCT6 385 aa4.1□□□□□ -1.75
SMARCE1-215ENST00000578995 PARD3BQ8TEW8 1205 aa4.1□□□□□ -1.75
SMARCE1-215ENST00000578995 NELFBQ8WX92 580 aa4.1□□□□□ -1.75
SMARCE1-215ENST00000578995 POMGNT1Q8WZA1 660 aa4.1□□□□□ -1.75
SMARCE1-215ENST00000578995 RABGGTAQ92696 567 aa4.1□□□□□ -1.75
SMARCE1-215ENST00000578995 SLC35C1Q96A29 364 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms