RNA–Protein interactions for RNA: ENST00000578469.1

SREBF1-218, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 588 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-218ENST00000578469 OTOP2Q7RTS6 562 aa17.89■□□□□ 0.45
SREBF1-218ENST00000578469 LIMS2Q7Z4I7 341 aa17.89■□□□□ 0.45
SREBF1-218ENST00000578469 ADGRF2Q8IZF7 708 aa17.89■□□□□ 0.45
SREBF1-218ENST00000578469 CRYBG2Q8N1P7 616 aa17.89■□□□□ 0.45
SREBF1-218ENST00000578469 GSTCDQ8NEC7 633 aa17.89■□□□□ 0.45
SREBF1-218ENST00000578469 RGS18Q9NS28 235 aa17.89■□□□□ 0.45
SREBF1-218ENST00000578469 RBM12Q9NTZ6 932 aaKnown RBP17.89■□□□□ 0.45
SREBF1-218ENST00000578469 CXXC1Q9P0U4 656 aaPredicted RBP17.89■□□□□ 0.45
SREBF1-218ENST00000578469 RAB21Q9UL25 225 aa17.89■□□□□ 0.45
SREBF1-218ENST00000578469 L1RE1Q9UN81 338 aa17.89■□□□□ 0.45
SREBF1-218ENST00000578469 SLC4A7Q9Y6M7 1214 aa17.89■□□□□ 0.45
SREBF1-218ENST00000578469 TMEM191CA6NGB0 347 aa17.88■□□□□ 0.45
SREBF1-218ENST00000578469 ZBBXA8MT70 800 aa17.88■□□□□ 0.45
SREBF1-218ENST00000578469 KRIT1O00522 736 aa17.88■□□□□ 0.45
SREBF1-218ENST00000578469 EOMESO95936 686 aa17.88■□□□□ 0.45
SREBF1-218ENST00000578469 IBSPP21815 317 aaPredicted RBP17.88■□□□□ 0.45
SREBF1-218ENST00000578469 PEX5P50542 639 aa17.88■□□□□ 0.45
SREBF1-218ENST00000578469 GSCP56915 257 aaPredicted RBP17.88■□□□□ 0.45
SREBF1-218ENST00000578469 GRIK3Q13003 919 aa17.88■□□□□ 0.45
SREBF1-218ENST00000578469 PDCLQ13371 301 aa17.88■□□□□ 0.45
SREBF1-218ENST00000578469 PPP2R5EQ16537 467 aa17.88■□□□□ 0.45
SREBF1-218ENST00000578469 C8orf74Q6P047 294 aa17.88■□□□□ 0.45
SREBF1-218ENST00000578469 TRAF7Q6Q0C0 670 aa17.88■□□□□ 0.45
SREBF1-218ENST00000578469 TMCO3Q6UWJ1 677 aa17.88■□□□□ 0.45
SREBF1-218ENST00000578469 DSTYKQ6XUX3 929 aa17.88■□□□□ 0.45
SREBF1-218ENST00000578469 TMEM86AQ8N2M4 240 aa17.88■□□□□ 0.45
SREBF1-218ENST00000578469 MICALL1Q8N3F8 863 aa17.88■□□□□ 0.45
SREBF1-218ENST00000578469 UBA3Q8TBC4 463 aa17.88■□□□□ 0.45
SREBF1-218ENST00000578469 KBTBD7Q8WVZ9 684 aa17.88■□□□□ 0.45
SREBF1-218ENST00000578469 KRT35Q92764 455 aa17.88■□□□□ 0.45
SREBF1-218ENST00000578469 UROC1Q96N76 676 aa17.88■□□□□ 0.45
SREBF1-218ENST00000578469 MIOSQ9NXC5 875 aa17.88■□□□□ 0.45
SREBF1-218ENST00000578469 SCN1AP35498 2009 aa17.88■□□□□ 0.45
SREBF1-218ENST00000578469 GBF1Q92538 1859 aa17.87■□□□□ 0.45
SREBF1-218ENST00000578469 GOLGA6L10A0A0M3HER8 536 aa17.87■□□□□ 0.45
SREBF1-218ENST00000578469 TCRBV5S1A1TA0A578 114 aa17.87■□□□□ 0.45
SREBF1-218ENST00000578469 CCDC151A5D8V7 595 aa17.87■□□□□ 0.45
SREBF1-218ENST00000578469 SIGLEC16A6NMB1 481 aa17.87■□□□□ 0.45
SREBF1-218ENST00000578469 FGGP02679 453 aa17.87■□□□□ 0.45
SREBF1-218ENST00000578469 PDGFRBP09619 1106 aa17.87■□□□□ 0.45
SREBF1-218ENST00000578469 KRT3P12035 628 aa17.87■□□□□ 0.45
SREBF1-218ENST00000578469 GABRB2P47870 512 aa17.87■□□□□ 0.45
SREBF1-218ENST00000578469 CCL23P55773 120 aa17.87■□□□□ 0.45
SREBF1-218ENST00000578469 PIGHQ14442 188 aaPredicted RBP17.87■□□□□ 0.45
SREBF1-218ENST00000578469 PPP1R26Q5T8A7 1209 aaPredicted RBP17.87■□□□□ 0.45
SREBF1-218ENST00000578469 CYP4A22Q5TCH4 519 aa17.87■□□□□ 0.45
SREBF1-218ENST00000578469 WDR93Q6P2C0 686 aa17.87■□□□□ 0.45
SREBF1-218ENST00000578469 SLC24A5Q71RS6 500 aa17.87■□□□□ 0.45
SREBF1-218ENST00000578469 RHOT1Q8IXI2 618 aa17.87■□□□□ 0.45
SREBF1-218ENST00000578469 C12orf29Q8N999 325 aa17.87■□□□□ 0.45
SREBF1-218ENST00000578469 ALG3Q92685 438 aa17.87■□□□□ 0.45
SREBF1-218ENST00000578469 SENP8Q96LD8 212 aa17.87■□□□□ 0.45
SREBF1-218ENST00000578469 MCEEQ96PE7 176 aa17.87■□□□□ 0.45
SREBF1-218ENST00000578469 CPXM1Q96SM3 734 aa17.87■□□□□ 0.45
SREBF1-218ENST00000578469 RNF216Q9NWF9 866 aaPredicted RBP17.87■□□□□ 0.45
SREBF1-218ENST00000578469 CYTH4Q9UIA0 394 aa17.87■□□□□ 0.45
SREBF1-218ENST00000578469 TMEM59LQ9UK28 342 aa17.87■□□□□ 0.45
SREBF1-218ENST00000578469 YBX2Q9Y2T7 364 aaKnown RBP17.87■□□□□ 0.45
SREBF1-218ENST00000578469 PCDHA11Q9Y5I1 949 aa17.87■□□□□ 0.45
SREBF1-218ENST00000578469 ARHGEF37A1IGU5 675 aa17.86■□□□□ 0.45
SREBF1-218ENST00000578469 GOLGA8SH3BPF8 625 aa17.86■□□□□ 0.45
SREBF1-218ENST00000578469 PSTPIP1O43586 416 aa17.86■□□□□ 0.45
SREBF1-218ENST00000578469 POMCP01189 267 aa17.86■□□□□ 0.45
SREBF1-218ENST00000578469 PFKMP08237 780 aa17.86■□□□□ 0.45
SREBF1-218ENST00000578469 FGFR1P11362 822 aa17.86■□□□□ 0.45
SREBF1-218ENST00000578469 LHX1P48742 406 aa17.86■□□□□ 0.45
SREBF1-218ENST00000578469 CLCNKBP51801 687 aa17.86■□□□□ 0.45
SREBF1-218ENST00000578469 ZNF211Q13398 564 aaPredicted RBP17.86■□□□□ 0.45
SREBF1-218ENST00000578469 TUSC3Q13454 348 aa17.86■□□□□ 0.45
SREBF1-218ENST00000578469 SKIV2LQ15477 1246 aaKnown RBP17.86■□□□□ 0.45
SREBF1-218ENST00000578469 PPP1R15BQ5SWA1 713 aa17.86■□□□□ 0.45
SREBF1-218ENST00000578469 DCAF12L1Q5VU92 463 aa17.86■□□□□ 0.45
SREBF1-218ENST00000578469 GLB1LQ6UWU2 654 aa17.86■□□□□ 0.45
SREBF1-218ENST00000578469 ZNF598Q86UK7 904 aaKnown RBP17.86■□□□□ 0.45
SREBF1-218ENST00000578469 XYLT1Q86Y38 959 aa17.86■□□□□ 0.45
SREBF1-218ENST00000578469 STK32AQ8WU08 396 aa17.86■□□□□ 0.45
SREBF1-218ENST00000578469 KRT12Q99456 494 aa17.86■□□□□ 0.45
SREBF1-218ENST00000578469 LRRC1Q9BTT6 524 aa17.86■□□□□ 0.45
SREBF1-218ENST00000578469 C1QTNF1Q9BXJ1 281 aa17.86■□□□□ 0.45
SREBF1-218ENST00000578469 TRIM7Q9C029 511 aa17.86■□□□□ 0.45
SREBF1-218ENST00000578469 ST7Q9NRC1 585 aa17.86■□□□□ 0.45
SREBF1-218ENST00000578469 FAM49BQ9NUQ9 324 aa17.86■□□□□ 0.45
SREBF1-218ENST00000578469 USTQ9Y2C2 406 aa17.86■□□□□ 0.45
SREBF1-218ENST00000578469 INPP5FQ9Y2H2 1132 aa17.86■□□□□ 0.45
SREBF1-218ENST00000578469 CHD7Q9P2D1 2997 aa17.85■□□□□ 0.45
SREBF1-218ENST00000578469 CASTOR2A6NHX0 329 aa17.85■□□□□ 0.45
SREBF1-218ENST00000578469 C9IYK1 514 aa17.85■□□□□ 0.45
SREBF1-218ENST00000578469 INPPL1O15357 1258 aa17.85■□□□□ 0.45
SREBF1-218ENST00000578469 ERBB2P04626 1255 aa17.85■□□□□ 0.45
SREBF1-218ENST00000578469 ATP2A2P16615 1042 aaKnown RBP17.85■□□□□ 0.45
SREBF1-218ENST00000578469 PLA2G5P39877 138 aa17.85■□□□□ 0.45
SREBF1-218ENST00000578469 CETN2P41208 172 aa17.85■□□□□ 0.45
SREBF1-218ENST00000578469 SSR1P43307 286 aaKnown RBP17.85■□□□□ 0.45
SREBF1-218ENST00000578469 CLCN6P51797 869 aa17.85■□□□□ 0.45
SREBF1-218ENST00000578469 RPL7AP62424 266 aaKnown RBP17.85■□□□□ 0.45
SREBF1-218ENST00000578469 FAM189BP81408 668 aa17.85■□□□□ 0.45
SREBF1-218ENST00000578469 MBTPS1Q14703 1052 aa17.85■□□□□ 0.45
SREBF1-218ENST00000578469 METTL23Q86XA0 190 aa17.85■□□□□ 0.45
SREBF1-218ENST00000578469 ANKRD52Q8NB46 1076 aa17.85■□□□□ 0.45
SREBF1-218ENST00000578469 SPATA18Q8TC71 538 aa17.85■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms