RNA–Protein interactions for RNA: ENST00000577716.5

RNF43-203, Transcript of ring finger protein 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF43, Length 4,367 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-203ENST00000577716 FRA10AC1Q70Z53 315 aa11.34□□□□□ -0.59
RNF43-203ENST00000577716 GALNT4Q8N4A0 578 aa11.34□□□□□ -0.59
RNF43-203ENST00000577716 CCDC33Q8N5R6 958 aa11.34□□□□□ -0.59
RNF43-203ENST00000577716 CHST13Q8NET6 341 aa11.34□□□□□ -0.59
RNF43-203ENST00000577716 TEKT4Q8WW24 435 aa11.34□□□□□ -0.59
RNF43-203ENST00000577716 KCTD10Q9H3F6 313 aa11.34□□□□□ -0.59
RNF43-203ENST00000577716 ELP3Q9H9T3 547 aa11.34□□□□□ -0.59
RNF43-203ENST00000577716 MAP3K20Q9NYL2 800 aaKnown RBP11.34□□□□□ -0.59
RNF43-203ENST00000577716 CTNNAL1Q9UBT7 734 aa11.34□□□□□ -0.59
RNF43-203ENST00000577716 DNPEPQ9ULA0 475 aa11.34□□□□□ -0.59
RNF43-203ENST00000577716 SLC39A10Q9ULF5 831 aa11.34□□□□□ -0.59
RNF43-203ENST00000577716 SNX3O60493 162 aa11.34□□□□□ -0.59
RNF43-203ENST00000577716 TLR2O60603 784 aa11.34□□□□□ -0.59
RNF43-203ENST00000577716 VIL1P09327 827 aaKnown RBP11.34□□□□□ -0.59
RNF43-203ENST00000577716 BGNP21810 368 aa11.34□□□□□ -0.59
RNF43-203ENST00000577716 IL10P22301 178 aa11.34□□□□□ -0.59
RNF43-203ENST00000577716 NLRP11P59045 1033 aaKnown RBP11.34□□□□□ -0.59
RNF43-203ENST00000577716 NBPF20Q3BBV1 942 aa11.34□□□□□ -0.59
RNF43-203ENST00000577716 SPDYCQ5MJ68 293 aa11.34□□□□□ -0.59
RNF43-203ENST00000577716 IFNEQ86WN2 208 aa11.34□□□□□ -0.59
RNF43-203ENST00000577716 AVENQ9NQS1 362 aaPredicted RBP11.34□□□□□ -0.59
RNF43-203ENST00000577716 ERAP1Q9NZ08 941 aa11.34□□□□□ -0.59
RNF43-203ENST00000577716 LRFN2Q9ULH4 789 aa11.34□□□□□ -0.59
RNF43-203ENST00000577716 SLIT3O75094 1523 aa11.33□□□□□ -0.59
RNF43-203ENST00000577716 LSM8O95777 96 aaKnown RBP11.33□□□□□ -0.6
RNF43-203ENST00000577716 CALB2P22676 271 aa11.33□□□□□ -0.6
RNF43-203ENST00000577716 PPARGP37231 505 aaPredicted RBP11.33□□□□□ -0.6
RNF43-203ENST00000577716 ALDH5A1P51649 535 aaPredicted RBP11.33□□□□□ -0.6
RNF43-203ENST00000577716 CLCN3P51790 818 aa11.33□□□□□ -0.6
RNF43-203ENST00000577716 AQP5P55064 265 aa11.33□□□□□ -0.6
RNF43-203ENST00000577716 EN1Q05925 392 aaPredicted RBP11.33□□□□□ -0.6
RNF43-203ENST00000577716 CACNB2Q08289 660 aaPredicted RBP11.33□□□□□ -0.6
RNF43-203ENST00000577716 AUHQ13825 339 aaKnown RBP11.33□□□□□ -0.6
RNF43-203ENST00000577716 RASA2Q15283 850 aa11.33□□□□□ -0.6
RNF43-203ENST00000577716 TCP10LQ8TDR4 215 aa11.33□□□□□ -0.6
RNF43-203ENST00000577716 ZKSCAN4Q969J2 545 aaPredicted RBP11.33□□□□□ -0.6
RNF43-203ENST00000577716 CNPY3Q9BT09 278 aa11.33□□□□□ -0.6
RNF43-203ENST00000577716 PXMP2Q9NR77 195 aa11.33□□□□□ -0.6
RNF43-203ENST00000577716 KCNQ5Q9NR82 932 aa11.33□□□□□ -0.6
RNF43-203ENST00000577716 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.33□□□□□ -0.61e-8■□□□□ 9.5
RNF43-203ENST00000577716 USP18Q9UMW8 372 aa11.33□□□□□ -0.6
RNF43-203ENST00000577716 LTN1O94822 1766 aa11.33□□□□□ -0.6
RNF43-203ENST00000577716 GAKO14976 1311 aa11.33□□□□□ -0.6
RNF43-203ENST00000577716 SPATA31A6Q5VVP1 1343 aa11.33□□□□□ -0.6
RNF43-203ENST00000577716 GJB6O95452 261 aa11.33□□□□□ -0.6
RNF43-203ENST00000577716 STMN1P16949 149 aa11.33□□□□□ -0.6
RNF43-203ENST00000577716 BMPR2Q13873 1038 aa11.33□□□□□ -0.6
RNF43-203ENST00000577716 RRP1BQ14684 758 aaKnown RBP11.33□□□□□ -0.6
RNF43-203ENST00000577716 AGBL3Q8NEM8 1001 aa11.33□□□□□ -0.6
RNF43-203ENST00000577716 PPHLN1Q8NEY8 458 aaKnown RBP11.33□□□□□ -0.6
RNF43-203ENST00000577716 ULK4Q96C45 1275 aa11.33□□□□□ -0.6
RNF43-203ENST00000577716 TMEM237Q96Q45 408 aa11.33□□□□□ -0.6
RNF43-203ENST00000577716 TMEM120AQ9BXJ8 343 aa11.33□□□□□ -0.6
RNF43-203ENST00000577716 CCDC90BQ9GZT6 254 aa11.33□□□□□ -0.6
RNF43-203ENST00000577716 BTNL10A8MVZ5 291 aa11.33□□□□□ -0.6
RNF43-203ENST00000577716 AP3B1O00203 1094 aa11.33□□□□□ -0.6
RNF43-203ENST00000577716 GAS2O43903 313 aaKnown RBP11.33□□□□□ -0.6
RNF43-203ENST00000577716 ZNF189O75820 626 aaPredicted RBP11.33□□□□□ -0.6
RNF43-203ENST00000577716 SEC24DO94855 1032 aaPredicted RBP11.33□□□□□ -0.6
RNF43-203ENST00000577716 ZCCHC18P0CG32 403 aa11.33□□□□□ -0.6
RNF43-203ENST00000577716 ACADSBP45954 432 aa11.33□□□□□ -0.6
RNF43-203ENST00000577716 SLC20A2Q08357 652 aa11.33□□□□□ -0.6
RNF43-203ENST00000577716 ECM1Q16610 540 aa11.33□□□□□ -0.6
RNF43-203ENST00000577716 EFHC1Q5JVL4 640 aa11.33□□□□□ -0.6
RNF43-203ENST00000577716 SLC7A14Q8TBB6 771 aa11.33□□□□□ -0.6
RNF43-203ENST00000577716 RXFP2Q8WXD0 754 aa11.33□□□□□ -0.6
RNF43-203ENST00000577716 HES6Q96HZ4 224 aa11.33□□□□□ -0.6
RNF43-203ENST00000577716 VCPIP1Q96JH7 1222 aa11.33□□□□□ -0.6
RNF43-203ENST00000577716 KIF1AQ12756 1690 aa11.33□□□□□ -0.6
RNF43-203ENST00000577716 SRRM3A6NNA2 597 aaPredicted RBP11.32□□□□□ -0.6
RNF43-203ENST00000577716 GLRA3O75311 464 aa11.32□□□□□ -0.6
RNF43-203ENST00000577716 CYP3A4P08684 503 aa11.32□□□□□ -0.6
RNF43-203ENST00000577716 VDRP11473 427 aa11.32□□□□□ -0.6
RNF43-203ENST00000577716 ELK3P41970 407 aa11.32□□□□□ -0.6
RNF43-203ENST00000577716 GCLCP48506 637 aaPredicted RBP11.32□□□□□ -0.6
RNF43-203ENST00000577716 DRG2P55039 364 aaKnown RBP11.32□□□□□ -0.6
RNF43-203ENST00000577716 PDCD2Q16342 344 aaPredicted RBP11.32□□□□□ -0.6
RNF43-203ENST00000577716 HGSNATQ68CP4 663 aa11.32□□□□□ -0.6
RNF43-203ENST00000577716 DUPD1Q68J44 220 aa11.32□□□□□ -0.6
RNF43-203ENST00000577716 C16orf89Q6UX73 402 aa11.32□□□□□ -0.6
RNF43-203ENST00000577716 ACOT1Q86TX2 421 aa11.32□□□□□ -0.6
RNF43-203ENST00000577716 SCUBE1Q8IWY4 988 aa11.32□□□□□ -0.6
RNF43-203ENST00000577716 TFB1MQ8WVM0 346 aaKnown RBP11.32□□□□□ -0.6
RNF43-203ENST00000577716 SPIRE2Q8WWL2 714 aa11.32□□□□□ -0.6
RNF43-203ENST00000577716 PBXIP1Q96AQ6 731 aa11.32□□□□□ -0.6
RNF43-203ENST00000577716 SGF29Q96ES7 293 aa11.32□□□□□ -0.6
RNF43-203ENST00000577716 IDI2Q9BXS1 227 aa11.32□□□□□ -0.6
RNF43-203ENST00000577716 EML4Q9HC35 981 aaKnown RBP11.32□□□□□ -0.6
RNF43-203ENST00000577716 GGA3Q9NZ52 723 aa11.32□□□□□ -0.6
RNF43-203ENST00000577716 ARHGAP26Q9UNA1 814 aa11.32□□□□□ -0.6
RNF43-203ENST00000577716 ANKRD63C9JTQ0 380 aa11.32□□□□□ -0.6
RNF43-203ENST00000577716 ANGPT2O15123 496 aa11.32□□□□□ -0.6
RNF43-203ENST00000577716 TM9SF1O15321 606 aa11.32□□□□□ -0.6
RNF43-203ENST00000577716 CBX6O95503 412 aa11.32□□□□□ -0.6
RNF43-203ENST00000577716 VCAM1P19320 739 aa11.32□□□□□ -0.6
RNF43-203ENST00000577716 GMPSP49915 693 aaPredicted RBP11.32□□□□□ -0.6
RNF43-203ENST00000577716 PTPN11Q06124 597 aaPredicted RBP11.32□□□□□ -0.6
RNF43-203ENST00000577716 FOXD4Q12950 439 aaPredicted RBP11.32□□□□□ -0.6
RNF43-203ENST00000577716 CNGA2Q16280 664 aa11.32□□□□□ -0.6
RNF43-203ENST00000577716 ETNPPLQ8TBG4 499 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms