RNA–Protein interactions for RNA: ENST00000577197.1

TSEN54-204, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

TSL 2

Gene TSEN54, Length 650 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-204ENST00000577197 NIPA2Q8N8Q9 360 aa13.15□□□□□ -0.3
TSEN54-204ENST00000577197 ARHGEF26Q96DR7 871 aa13.15□□□□□ -0.3
TSEN54-204ENST00000577197 PKMYT1Q99640 499 aa13.15□□□□□ -0.3
TSEN54-204ENST00000577197 NCAPGQ9BPX3 1015 aa13.15□□□□□ -0.3
TSEN54-204ENST00000577197 NUP85Q9BW27 656 aa13.15□□□□□ -0.3
TSEN54-204ENST00000577197 IRX2Q9BZI1 471 aaPredicted RBP13.15□□□□□ -0.3
TSEN54-204ENST00000577197 CSNK1G1Q9HCP0 422 aa13.15□□□□□ -0.3
TSEN54-204ENST00000577197 AAASQ9NRG9 546 aa13.15□□□□□ -0.3
TSEN54-204ENST00000577197 MARCH5Q9NX47 278 aa13.15□□□□□ -0.3
TSEN54-204ENST00000577197 RWDD3Q9Y3V2 267 aa13.15□□□□□ -0.3
TSEN54-204ENST00000577197 SIGLEC16A6NMB1 481 aa13.14□□□□□ -0.31
TSEN54-204ENST00000577197 SART1O43290 800 aaKnown RBP13.14□□□□□ -0.31
TSEN54-204ENST00000577197 PALMO75781 387 aa13.14□□□□□ -0.31
TSEN54-204ENST00000577197 CFHP08603 1231 aa13.14□□□□□ -0.31
TSEN54-204ENST00000577197 RRM1P23921 792 aa13.14□□□□□ -0.31
TSEN54-204ENST00000577197 SLC11A1P49279 550 aa13.14□□□□□ -0.31
TSEN54-204ENST00000577197 CFAP221Q4G0U5 840 aa13.14□□□□□ -0.31
TSEN54-204ENST00000577197 PTPN20Q4JDL3 420 aa13.14□□□□□ -0.31
TSEN54-204ENST00000577197 PPP1R15BQ5SWA1 713 aa13.14□□□□□ -0.31
TSEN54-204ENST00000577197 ZNF280DQ6N043 979 aa13.14□□□□□ -0.31
TSEN54-204ENST00000577197 FUT10Q6P4F1 479 aa13.14□□□□□ -0.31
TSEN54-204ENST00000577197 MMS22LQ6ZRQ5 1243 aa13.14□□□□□ -0.31
TSEN54-204ENST00000577197 ANKS3Q6ZW76 656 aa13.14□□□□□ -0.31
TSEN54-204ENST00000577197 DAAM2Q86T65 1068 aa13.14□□□□□ -0.31
TSEN54-204ENST00000577197 TTC30AQ86WT1 665 aa13.14□□□□□ -0.31
TSEN54-204ENST00000577197 FUKQ8N0W3 1084 aa13.14□□□□□ -0.31
TSEN54-204ENST00000577197 C12orf29Q8N999 325 aa13.14□□□□□ -0.31
TSEN54-204ENST00000577197 C2orf15Q8WU43 125 aaKnown RBP13.14□□□□□ -0.31
TSEN54-204ENST00000577197 SMARCD1Q96GM5 515 aa13.14□□□□□ -0.31
TSEN54-204ENST00000577197 RPGRIP1Q96KN7 1286 aa13.14□□□□□ -0.31
TSEN54-204ENST00000577197 RTP3Q9BQQ7 232 aa13.14□□□□□ -0.31
TSEN54-204ENST00000577197 C11orf70Q9BRQ4 267 aa13.14□□□□□ -0.31
TSEN54-204ENST00000577197 CWH43Q9H720 699 aa13.14□□□□□ -0.31
TSEN54-204ENST00000577197 CRTAC1Q9NQ79 661 aa13.14□□□□□ -0.31
TSEN54-204ENST00000577197 ASNSD1Q9NWL6 643 aa13.14□□□□□ -0.31
TSEN54-204ENST00000577197 HSFX1Q9UBD0 423 aa13.14□□□□□ -0.31
TSEN54-204ENST00000577197 DNAJB4Q9UDY4 337 aa13.14□□□□□ -0.31
TSEN54-204ENST00000577197 MSRAQ9UJ68 235 aa13.14□□□□□ -0.31
TSEN54-204ENST00000577197 CDC23Q9UJX2 597 aa13.14□□□□□ -0.31
TSEN54-204ENST00000577197 MAFFQ9ULX9 164 aa13.14□□□□□ -0.31
TSEN54-204ENST00000577197 SNX12Q9UMY4 172 aa13.14□□□□□ -0.31
TSEN54-204ENST00000577197 SAR1BQ9Y6B6 198 aa13.14□□□□□ -0.31
TSEN54-204ENST00000577197 MRPL42Q9Y6G3 142 aaKnown RBP13.14□□□□□ -0.31
TSEN54-204ENST00000577197 PTPRDP23468 1912 aa13.13□□□□□ -0.31
TSEN54-204ENST00000577197 TMEM191CA6NGB0 347 aa13.13□□□□□ -0.31
TSEN54-204ENST00000577197 GRXCR1A8MXD5 290 aa13.13□□□□□ -0.31
TSEN54-204ENST00000577197 MYO1FO00160 1098 aa13.13□□□□□ -0.31
TSEN54-204ENST00000577197 FANCGO15287 622 aa13.13□□□□□ -0.31
TSEN54-204ENST00000577197 BUB1O43683 1085 aa13.13□□□□□ -0.31
TSEN54-204ENST00000577197 TBC1D4O60343 1298 aa13.13□□□□□ -0.31
TSEN54-204ENST00000577197 BUB1BO60566 1050 aaPredicted RBP13.13□□□□□ -0.31
TSEN54-204ENST00000577197 FBXO21O94952 628 aa13.13□□□□□ -0.31
TSEN54-204ENST00000577197 ERBB2P04626 1255 aa13.13□□□□□ -0.31
TSEN54-204ENST00000577197 GLI1P08151 1106 aa13.13□□□□□ -0.31
TSEN54-204ENST00000577197 PDGFRBP09619 1106 aa13.13□□□□□ -0.31
TSEN54-204ENST00000577197 FAM200BP0CF97 657 aa13.13□□□□□ -0.31
TSEN54-204ENST00000577197 MAGEA11P43364 429 aa13.13□□□□□ -0.31
TSEN54-204ENST00000577197 BRCC3P46736 316 aa13.13□□□□□ -0.31
TSEN54-204ENST00000577197 RABGGTBP53611 331 aa13.13□□□□□ -0.31
TSEN54-204ENST00000577197 BCAR1P56945 870 aa13.13□□□□□ -0.31
TSEN54-204ENST00000577197 SMAD3P84022 425 aaKnown RBP13.13□□□□□ -0.31
TSEN54-204ENST00000577197 ITIH3Q06033 890 aa13.13□□□□□ -0.31
TSEN54-204ENST00000577197 PIGHQ14442 188 aaPredicted RBP13.13□□□□□ -0.31
TSEN54-204ENST00000577197 WHAMMP3Q1A5X7 153 aa13.13□□□□□ -0.31
TSEN54-204ENST00000577197 LRIT3Q3SXY7 679 aa13.13□□□□□ -0.31
TSEN54-204ENST00000577197 SPOUT1Q5T280 376 aaKnown RBP13.13□□□□□ -0.31
TSEN54-204ENST00000577197 FAM109BQ6ICB4 259 aaPredicted RBP13.13□□□□□ -0.31
TSEN54-204ENST00000577197 DNAJC24Q6P3W2 148 aa13.13□□□□□ -0.31
TSEN54-204ENST00000577197 PEX26Q7Z412 305 aa13.13□□□□□ -0.31
TSEN54-204ENST00000577197 NT5DC3Q86UY8 548 aa13.13□□□□□ -0.31
TSEN54-204ENST00000577197 XYLT1Q86Y38 959 aa13.13□□□□□ -0.31
TSEN54-204ENST00000577197 PASD1Q8IV76 773 aa13.13□□□□□ -0.31
TSEN54-204ENST00000577197 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.13□□□□□ -0.31
TSEN54-204ENST00000577197 FEZF2Q8TBJ5 459 aa13.13□□□□□ -0.31
TSEN54-204ENST00000577197 SLC2A14Q8TDB8 520 aa13.13□□□□□ -0.31
TSEN54-204ENST00000577197 CLP1Q92989 425 aaKnown RBP13.13□□□□□ -0.31
TSEN54-204ENST00000577197 HES6Q96HZ4 224 aa13.13□□□□□ -0.31
TSEN54-204ENST00000577197 ZNF558Q96NG5 402 aa13.13□□□□□ -0.31
TSEN54-204ENST00000577197 SAMD11Q96NU1 681 aa13.13□□□□□ -0.31
TSEN54-204ENST00000577197 CPXM1Q96SM3 734 aa13.13□□□□□ -0.31
TSEN54-204ENST00000577197 TLR10Q9BXR5 811 aa13.13□□□□□ -0.31
TSEN54-204ENST00000577197 PBX4Q9BYU1 374 aa13.13□□□□□ -0.31
TSEN54-204ENST00000577197 ZCWPW1Q9H0M4 648 aa13.13□□□□□ -0.31
TSEN54-204ENST00000577197 DPEP3Q9H4B8 488 aa13.13□□□□□ -0.31
TSEN54-204ENST00000577197 SYNCQ9H7C4 482 aa13.13□□□□□ -0.31
TSEN54-204ENST00000577197 OSGEPQ9NPF4 335 aa13.13□□□□□ -0.31
TSEN54-204ENST00000577197 IP6K2Q9UHH9 426 aa13.13□□□□□ -0.31
TSEN54-204ENST00000577197 AMFRQ9UKV5 643 aa13.13□□□□□ -0.31
TSEN54-204ENST00000577197 TFR2Q9UP52 801 aa13.13□□□□□ -0.31
TSEN54-204ENST00000577197 COG5Q9UP83 839 aa13.13□□□□□ -0.31
TSEN54-204ENST00000577197 HYOU1Q9Y4L1 999 aa13.13□□□□□ -0.31
TSEN54-204ENST00000577197 BACE2Q9Y5Z0 518 aa13.13□□□□□ -0.31
TSEN54-204ENST00000577197 MRFAP1Q9Y605 127 aa13.13□□□□□ -0.31
TSEN54-204ENST00000577197 PATJQ8NI35 1801 aa13.12□□□□□ -0.31
TSEN54-204ENST00000577197 CCDC66A2RUB6 948 aa13.12□□□□□ -0.31
TSEN54-204ENST00000577197 PROSCO94903 275 aa13.12□□□□□ -0.31
TSEN54-204ENST00000577197 ITGB1P05556 798 aa13.12□□□□□ -0.31
TSEN54-204ENST00000577197 CREMQ03060 361 aa13.12□□□□□ -0.31
TSEN54-204ENST00000577197 PDE4CQ08493 712 aa13.12□□□□□ -0.31
TSEN54-204ENST00000577197 USP41Q3LFD5 358 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms