RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 ZSWIM3Q96MP5 696 aa14.12□□□□□ -0.15
RPAIN-216ENST00000575599 NIF3L1Q9GZT8 377 aa14.12□□□□□ -0.15
RPAIN-216ENST00000575599 TSPY26PQ9H489 355 aa14.12□□□□□ -0.15
RPAIN-216ENST00000575599 METTL14Q9HCE5 456 aaKnown RBP14.12□□□□□ -0.15
RPAIN-216ENST00000575599 HMGXB4Q9UGU5 601 aa14.12□□□□□ -0.15
RPAIN-216ENST00000575599 DACH1Q9UI36 760 aa14.12□□□□□ -0.15
RPAIN-216ENST00000575599 FBXL21Q9UKT6 434 aa14.12□□□□□ -0.15
RPAIN-216ENST00000575599 PTPRDP23468 1912 aa14.11□□□□□ -0.15
RPAIN-216ENST00000575599 CLDN5O00501 218 aa14.11□□□□□ -0.15
RPAIN-216ENST00000575599 CD58P19256 250 aa14.11□□□□□ -0.15
RPAIN-216ENST00000575599 ANXA13P27216 316 aa14.11□□□□□ -0.15
RPAIN-216ENST00000575599 CDC25CP30307 473 aa14.11□□□□□ -0.15
RPAIN-216ENST00000575599 MAGEA11P43364 429 aa14.11□□□□□ -0.15
RPAIN-216ENST00000575599 NDST1P52848 882 aa14.11□□□□□ -0.15
RPAIN-216ENST00000575599 NLRP12P59046 1061 aa14.11□□□□□ -0.15
RPAIN-216ENST00000575599 MCCD1P59942 119 aaPredicted RBP14.11□□□□□ -0.15
RPAIN-216ENST00000575599 ARHGAP15Q53QZ3 475 aa14.11□□□□□ -0.15
RPAIN-216ENST00000575599 VSTM1Q6UX27 236 aa14.11□□□□□ -0.15
RPAIN-216ENST00000575599 FRMD5Q7Z6J6 570 aa14.11□□□□□ -0.15
RPAIN-216ENST00000575599 ACOT1Q86TX2 421 aa14.11□□□□□ -0.15
RPAIN-216ENST00000575599 ZSCAN18Q8TBC5 510 aaPredicted RBP14.11□□□□□ -0.15
RPAIN-216ENST00000575599 SLC35C1Q96A29 364 aa14.11□□□□□ -0.15
RPAIN-216ENST00000575599 TNIP3Q96KP6 325 aa14.11□□□□□ -0.15
RPAIN-216ENST00000575599 ASB16Q96NS5 453 aa14.11□□□□□ -0.15
RPAIN-216ENST00000575599 HS3ST6Q96QI5 342 aa14.11□□□□□ -0.15
RPAIN-216ENST00000575599 MED10Q9BTT4 135 aa14.11□□□□□ -0.15
RPAIN-216ENST00000575599 BCO2Q9BYV7 579 aa14.11□□□□□ -0.15
RPAIN-216ENST00000575599 ZNF518BQ9C0D4 1074 aa14.11□□□□□ -0.15
RPAIN-216ENST00000575599 NAT10Q9H0A0 1025 aaKnown RBP14.11□□□□□ -0.15
RPAIN-216ENST00000575599 IL21Q9HBE4 155 aa14.11□□□□□ -0.15
RPAIN-216ENST00000575599 RAB20Q9NX57 234 aa14.11□□□□□ -0.15
RPAIN-216ENST00000575599 SLC38A8A6NNN8 435 aa14.1□□□□□ -0.15
RPAIN-216ENST00000575599 TRIM66O15016 1216 aa14.1□□□□□ -0.15
RPAIN-216ENST00000575599 ECI2O75521 394 aa14.1□□□□□ -0.15
RPAIN-216ENST00000575599 PDGFBP01127 241 aaPredicted RBP14.1□□□□□ -0.15
RPAIN-216ENST00000575599 CSH1P0DML2 217 aa14.1□□□□□ -0.15
RPAIN-216ENST00000575599 CSH2P0DML3 217 aa14.1□□□□□ -0.15
RPAIN-216ENST00000575599 SRFP11831 508 aa14.1□□□□□ -0.15
RPAIN-216ENST00000575599 HMGA1P17096 107 aaKnown RBP14.1□□□□□ -0.15
RPAIN-216ENST00000575599 FCARP24071 287 aa14.1□□□□□ -0.15
RPAIN-216ENST00000575599 WDR44Q5JSH3 913 aa14.1□□□□□ -0.15
RPAIN-216ENST00000575599 GPR158Q5T848 1215 aa14.1□□□□□ -0.15
RPAIN-216ENST00000575599 TANGO2Q6ICL3 276 aa14.1□□□□□ -0.15
RPAIN-216ENST00000575599 FOXR2Q6PJQ5 311 aa14.1□□□□□ -0.15
RPAIN-216ENST00000575599 SMARCD2Q92925 531 aa14.1□□□□□ -0.15
RPAIN-216ENST00000575599 SRRTQ9BXP5 876 aaKnown RBP14.1□□□□□ -0.15
RPAIN-216ENST00000575599 B3GNT5Q9BYG0 378 aa14.1□□□□□ -0.15
RPAIN-216ENST00000575599 PLA2G2FQ9BZM2 168 aa14.1□□□□□ -0.15
RPAIN-216ENST00000575599 GPR88Q9GZN0 384 aa14.1□□□□□ -0.15
RPAIN-216ENST00000575599 ELOVL4Q9GZR5 314 aa14.1□□□□□ -0.15
RPAIN-216ENST00000575599 ZFP14Q9HCL3 533 aa14.1□□□□□ -0.15
RPAIN-216ENST00000575599 RWDD2AQ9UIY3 292 aa14.1□□□□□ -0.15
RPAIN-216ENST00000575599 CA14Q9ULX7 337 aa14.1□□□□□ -0.15
RPAIN-216ENST00000575599 ATP8B3O60423 1300 aa14.1□□□□□ -0.15
RPAIN-216ENST00000575599 F8VP50 259 aa14.09□□□□□ -0.15
RPAIN-216ENST00000575599 NOL4O94818 638 aa14.09□□□□□ -0.15
RPAIN-216ENST00000575599 CCDC130P13994 396 aa14.09□□□□□ -0.15
RPAIN-216ENST00000575599 VIPR2P41587 438 aa14.09□□□□□ -0.15
RPAIN-216ENST00000575599 CACNA2D1P54289 1103 aa14.09□□□□□ -0.15
RPAIN-216ENST00000575599 GRM2Q14416 872 aa14.09□□□□□ -0.15
RPAIN-216ENST00000575599 DPCR1Q3MIW9 517 aa14.09□□□□□ -0.15
RPAIN-216ENST00000575599 FAM35AQ86V20 835 aa14.09□□□□□ -0.15
RPAIN-216ENST00000575599 UNC93AQ86WB7 457 aa14.09□□□□□ -0.15
RPAIN-216ENST00000575599 CREBRFQ8IUR6 639 aa14.09□□□□□ -0.15
RPAIN-216ENST00000575599 GPIHBP1Q8IV16 184 aa14.09□□□□□ -0.15
RPAIN-216ENST00000575599 SUGP1Q8IWZ8 645 aaKnown RBP14.09□□□□□ -0.15
RPAIN-216ENST00000575599 SIX5Q8N196 739 aa14.09□□□□□ -0.15
RPAIN-216ENST00000575599 MLKLQ8NB16 471 aa14.09□□□□□ -0.15
RPAIN-216ENST00000575599 ELSPBP1Q96BH3 223 aa14.09□□□□□ -0.15
RPAIN-216ENST00000575599 TWNKQ96RR1 684 aa14.09□□□□□ -0.15
RPAIN-216ENST00000575599 MFSD1Q9H3U5 465 aa14.09□□□□□ -0.15
RPAIN-216ENST00000575599 CYP3A43Q9HB55 503 aa14.09□□□□□ -0.15
RPAIN-216ENST00000575599 FAM49BQ9NUQ9 324 aa14.09□□□□□ -0.15
RPAIN-216ENST00000575599 UXTQ9UBK9 157 aaPredicted RBP14.09□□□□□ -0.15
RPAIN-216ENST00000575599 TRIOO75962 3097 aa14.09□□□□□ -0.15
RPAIN-216ENST00000575599 FGFR1OPO95684 399 aaKnown RBP14.09□□□□□ -0.15
RPAIN-216ENST00000575599 CAVIN2O95810 425 aa14.09□□□□□ -0.15
RPAIN-216ENST00000575599 GNA14O95837 355 aa14.09□□□□□ -0.15
RPAIN-216ENST00000575599 TRIM21P19474 475 aaKnown RBP14.09□□□□□ -0.15
RPAIN-216ENST00000575599 FMO5P49326 533 aa14.09□□□□□ -0.15
RPAIN-216ENST00000575599 GPC5P78333 572 aa14.09□□□□□ -0.15
RPAIN-216ENST00000575599 INCA1Q0VD86 236 aa14.09□□□□□ -0.15
RPAIN-216ENST00000575599 IFRD2Q12894 506 aaPredicted RBP14.09□□□□□ -0.15
RPAIN-216ENST00000575599 LRMPQ12912 555 aa14.09□□□□□ -0.15
RPAIN-216ENST00000575599 DENND5BQ6ZUT9 1274 aa14.09□□□□□ -0.15
RPAIN-216ENST00000575599 TMEM150AQ86TG1 271 aa14.09□□□□□ -0.15
RPAIN-216ENST00000575599 TATDN2Q93075 761 aa14.09□□□□□ -0.15
RPAIN-216ENST00000575599 ARID3AQ99856 593 aa14.09□□□□□ -0.15
RPAIN-216ENST00000575599 NT5C1AQ9BXI3 368 aa14.09□□□□□ -0.15
RPAIN-216ENST00000575599 KRT82Q9NSB4 513 aa14.09□□□□□ -0.15
RPAIN-216ENST00000575599 TMEM30AQ9NV96 361 aa14.09□□□□□ -0.15
RPAIN-216ENST00000575599 OBSL1O75147 1896 aa14.08□□□□□ -0.16
RPAIN-216ENST00000575599 CILPO75339 1184 aa14.08□□□□□ -0.16
RPAIN-216ENST00000575599 TADA3O75528 432 aa14.08□□□□□ -0.16
RPAIN-216ENST00000575599 F11P03951 625 aa14.08□□□□□ -0.16
RPAIN-216ENST00000575599 COL9A1P20849 921 aa14.08□□□□□ -0.16
RPAIN-216ENST00000575599 RFX1P22670 979 aa14.08□□□□□ -0.16
RPAIN-216ENST00000575599 ADORA2BP29275 332 aa14.08□□□□□ -0.16
RPAIN-216ENST00000575599 USP46P62068 366 aa14.08□□□□□ -0.16
RPAIN-216ENST00000575599 TPD52L1Q16890 204 aaPredicted RBP14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 138.8 ms