RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 SGO2Q562F6 1265 aa13.55□□□□□ -0.24
TRAPPC1-206ENST00000573989 PHLDB3Q6NSJ2 640 aa13.55□□□□□ -0.24
TRAPPC1-206ENST00000573989 TMEM270Q6UE05 265 aa13.55□□□□□ -0.24
TRAPPC1-206ENST00000573989 FAM35AQ86V20 835 aa13.55□□□□□ -0.24
TRAPPC1-206ENST00000573989 C12orf29Q8N999 325 aa13.55□□□□□ -0.24
TRAPPC1-206ENST00000573989 SLC2A14Q8TDB8 520 aa13.55□□□□□ -0.24
TRAPPC1-206ENST00000573989 WHAMMQ8TF30 809 aa13.55□□□□□ -0.24
TRAPPC1-206ENST00000573989 GIPC2Q8TF65 315 aa13.55□□□□□ -0.24
TRAPPC1-206ENST00000573989 C8orf48Q96LL4 319 aa13.55□□□□□ -0.24
TRAPPC1-206ENST00000573989 TWNKQ96RR1 684 aa13.55□□□□□ -0.24
TRAPPC1-206ENST00000573989 HNRNPABQ99729 332 aaKnown RBP13.55□□□□□ -0.24
TRAPPC1-206ENST00000573989 LPIN3Q9BQK8 851 aa13.55□□□□□ -0.24
TRAPPC1-206ENST00000573989 ZNF518BQ9C0D4 1074 aa13.55□□□□□ -0.24
TRAPPC1-206ENST00000573989 GPR88Q9GZN0 384 aa13.55□□□□□ -0.24
TRAPPC1-206ENST00000573989 DMAP1Q9NPF5 467 aaPredicted RBP13.55□□□□□ -0.24
TRAPPC1-206ENST00000573989 FAM49BQ9NUQ9 324 aa13.55□□□□□ -0.24
TRAPPC1-206ENST00000573989 ZMYM5Q9UJ78 669 aa13.55□□□□□ -0.24
TRAPPC1-206ENST00000573989 LRRC10BA6NIK2 292 aa13.54□□□□□ -0.24
TRAPPC1-206ENST00000573989 C19orf67A6NJJ6 358 aa13.54□□□□□ -0.24
TRAPPC1-206ENST00000573989 C2CD4DB7Z1M9 353 aa13.54□□□□□ -0.24
TRAPPC1-206ENST00000573989 F8VP50 259 aa13.54□□□□□ -0.24
TRAPPC1-206ENST00000573989 CLDN5O00501 218 aa13.54□□□□□ -0.24
TRAPPC1-206ENST00000573989 AP1G2O75843 785 aa13.54□□□□□ -0.24
TRAPPC1-206ENST00000573989 PAEPP09466 180 aa13.54□□□□□ -0.24
TRAPPC1-206ENST00000573989 CCDC130P13994 396 aa13.54□□□□□ -0.24
TRAPPC1-206ENST00000573989 CD19P15391 556 aa13.54□□□□□ -0.24
TRAPPC1-206ENST00000573989 ADORA2BP29275 332 aa13.54□□□□□ -0.24
TRAPPC1-206ENST00000573989 RAD23BP54727 409 aa13.54□□□□□ -0.24
TRAPPC1-206ENST00000573989 NTHL1P78549 312 aa13.54□□□□□ -0.24
TRAPPC1-206ENST00000573989 STILQ15468 1287 aa13.54□□□□□ -0.24
TRAPPC1-206ENST00000573989 CCDC142Q17RM4 750 aa13.54□□□□□ -0.24
TRAPPC1-206ENST00000573989 LRSAM1Q6UWE0 723 aa13.54□□□□□ -0.24
TRAPPC1-206ENST00000573989 DENND5BQ6ZUT9 1274 aa13.54□□□□□ -0.24
TRAPPC1-206ENST00000573989 ARHGEF19Q8IW93 802 aa13.54□□□□□ -0.24
TRAPPC1-206ENST00000573989 ZDHHC14Q8IZN3 488 aa13.54□□□□□ -0.24
TRAPPC1-206ENST00000573989 FUKQ8N0W3 1084 aa13.54□□□□□ -0.24
TRAPPC1-206ENST00000573989 SLC4A11Q8NBS3 891 aa13.54□□□□□ -0.24
TRAPPC1-206ENST00000573989 CBX8Q9HC52 389 aa13.54□□□□□ -0.24
TRAPPC1-206ENST00000573989 KRT82Q9NSB4 513 aa13.54□□□□□ -0.24
TRAPPC1-206ENST00000573989 GDE1Q9NZC3 331 aa13.54□□□□□ -0.24
TRAPPC1-206ENST00000573989 HESX1Q9UBX0 185 aa13.54□□□□□ -0.24
TRAPPC1-206ENST00000573989 CDH7Q9ULB5 785 aa13.54□□□□□ -0.24
TRAPPC1-206ENST00000573989 MAGED2Q9UNF1 606 aaPredicted RBP13.54□□□□□ -0.24
TRAPPC1-206ENST00000573989 DAAM1Q9Y4D1 1078 aa13.54□□□□□ -0.24
TRAPPC1-206ENST00000573989 DENND4CQ5VZ89 1909 aa13.54□□□□□ -0.24
TRAPPC1-206ENST00000573989 C5orf42Q9H799 3197 aa13.54□□□□□ -0.24
TRAPPC1-206ENST00000573989 MYO10Q9HD67 2058 aa13.53□□□□□ -0.24
TRAPPC1-206ENST00000573989 SLC38A8A6NNN8 435 aa13.53□□□□□ -0.24
TRAPPC1-206ENST00000573989 RTN3O95197 1032 aaPredicted RBP13.53□□□□□ -0.24
TRAPPC1-206ENST00000573989 VDRP11473 427 aa13.53□□□□□ -0.24
TRAPPC1-206ENST00000573989 LAMP2P13473 410 aa13.53□□□□□ -0.24
TRAPPC1-206ENST00000573989 KRT5P13647 590 aa13.53□□□□□ -0.24
TRAPPC1-206ENST00000573989 GABRR2P28476 465 aa13.53□□□□□ -0.24
TRAPPC1-206ENST00000573989 GPR15P49685 360 aa13.53□□□□□ -0.24
TRAPPC1-206ENST00000573989 UBXN1Q04323 297 aa13.53□□□□□ -0.24
TRAPPC1-206ENST00000573989 IQCB1Q15051 598 aa13.53□□□□□ -0.24
TRAPPC1-206ENST00000573989 PRSS36Q5K4E3 855 aa13.53□□□□□ -0.24
TRAPPC1-206ENST00000573989 PPP1R26Q5T8A7 1209 aaPredicted RBP13.53□□□□□ -0.24
TRAPPC1-206ENST00000573989 ARHGAP17Q68EM7 881 aa13.53□□□□□ -0.24
TRAPPC1-206ENST00000573989 MTSS1LQ765P7 747 aa13.53□□□□□ -0.24
TRAPPC1-206ENST00000573989 HS6ST3Q8IZP7 471 aa13.53□□□□□ -0.24
TRAPPC1-206ENST00000573989 NUP93Q8N1F7 819 aa13.53□□□□□ -0.24
TRAPPC1-206ENST00000573989 UBR7Q8N806 425 aa13.53□□□□□ -0.24
TRAPPC1-206ENST00000573989 RBBP8NLQ8NC74 664 aaPredicted RBP13.53□□□□□ -0.24
TRAPPC1-206ENST00000573989 ITFG1Q8TB96 612 aa13.53□□□□□ -0.24
TRAPPC1-206ENST00000573989 FEZF2Q8TBJ5 459 aa13.53□□□□□ -0.24
TRAPPC1-206ENST00000573989 GPR152Q8TDT2 470 aa13.53□□□□□ -0.24
TRAPPC1-206ENST00000573989 FGF13Q92913 245 aa13.53□□□□□ -0.24
TRAPPC1-206ENST00000573989 NXPE3Q969Y0 559 aa13.53□□□□□ -0.24
TRAPPC1-206ENST00000573989 TRMT2BQ96GJ1 504 aaKnown RBP13.53□□□□□ -0.24
TRAPPC1-206ENST00000573989 PCMTD1Q96MG8 357 aaPredicted RBP13.53□□□□□ -0.24
TRAPPC1-206ENST00000573989 ATXN3LQ9H3M9 355 aa13.53□□□□□ -0.24
TRAPPC1-206ENST00000573989 TSPY26PQ9H489 355 aa13.53□□□□□ -0.24
TRAPPC1-206ENST00000573989 SLITRK6Q9H5Y7 841 aa13.53□□□□□ -0.24
TRAPPC1-206ENST00000573989 COMMD8Q9NX08 183 aa13.53□□□□□ -0.24
TRAPPC1-206ENST00000573989 EPS15L1Q9UBC2 864 aa13.53□□□□□ -0.24
TRAPPC1-206ENST00000573989 A0A1W2PRU2 124 aa13.52□□□□□ -0.25
TRAPPC1-206ENST00000573989 LGALS16A8MUM7 142 aa13.52□□□□□ -0.25
TRAPPC1-206ENST00000573989 NOL4O94818 638 aa13.52□□□□□ -0.25
TRAPPC1-206ENST00000573989 SERPINC1P01008 464 aa13.52□□□□□ -0.25
TRAPPC1-206ENST00000573989 NPR3P17342 541 aa13.52□□□□□ -0.25
TRAPPC1-206ENST00000573989 ACO1P21399 889 aaKnown RBP13.52□□□□□ -0.25
TRAPPC1-206ENST00000573989 DDX6P26196 483 aaKnown RBP eCLIP13.52□□□□□ -0.25
TRAPPC1-206ENST00000573989 USP8P40818 1118 aa13.52□□□□□ -0.25
TRAPPC1-206ENST00000573989 PPP3CCP48454 512 aa13.52□□□□□ -0.25
TRAPPC1-206ENST00000573989 ARHGAP44Q17R89 818 aa13.52□□□□□ -0.25
TRAPPC1-206ENST00000573989 SLC5A9Q2M3M2 681 aa13.52□□□□□ -0.25
TRAPPC1-206ENST00000573989 SDHAF4Q5VUM1 108 aa13.52□□□□□ -0.25
TRAPPC1-206ENST00000573989 PAQR9Q6ZVX9 377 aa13.52□□□□□ -0.25
TRAPPC1-206ENST00000573989 TMC8Q8IU68 726 aa13.52□□□□□ -0.25
TRAPPC1-206ENST00000573989 ING5Q8WYH8 240 aa13.52□□□□□ -0.25
TRAPPC1-206ENST00000573989 MRPS31Q92665 395 aaKnown RBP13.52□□□□□ -0.25
TRAPPC1-206ENST00000573989 KAT5Q92993 513 aa13.52□□□□□ -0.25
TRAPPC1-206ENST00000573989 MYRFLQ96LU7 910 aa13.52□□□□□ -0.25
TRAPPC1-206ENST00000573989 KREMEN1Q96MU8 473 aa13.52□□□□□ -0.25
TRAPPC1-206ENST00000573989 SLITRK1Q96PX8 696 aa13.52□□□□□ -0.25
TRAPPC1-206ENST00000573989 MYADMQ96S97 322 aa13.52□□□□□ -0.25
TRAPPC1-206ENST00000573989 LSM14BQ9BX40 385 aaKnown RBP13.52□□□□□ -0.25
TRAPPC1-206ENST00000573989 LRRC3Q9BY71 257 aa13.52□□□□□ -0.25
TRAPPC1-206ENST00000573989 DUSP16Q9BY84 665 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms