RNA–Protein interactions for RNA: ENST00000572043.5

CTDNEP1-207, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3 BASIC

Gene CTDNEP1, Length 857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-207ENST00000572043 F8VP50 259 aa18.95■□□□□ 0.62
CTDNEP1-207ENST00000572043 IKBKBO14920 756 aa18.95■□□□□ 0.62
CTDNEP1-207ENST00000572043 MAPK13O15264 365 aa18.95■□□□□ 0.62
CTDNEP1-207ENST00000572043 KINO60870 393 aaKnown RBP18.95■□□□□ 0.62
CTDNEP1-207ENST00000572043 FAM163BP0C2L3 166 aa18.95■□□□□ 0.62
CTDNEP1-207ENST00000572043 SOX9P48436 509 aa18.95■□□□□ 0.62
CTDNEP1-207ENST00000572043 CACNA2D1P54289 1103 aa18.95■□□□□ 0.62
CTDNEP1-207ENST00000572043 IFRD2Q12894 506 aaPredicted RBP18.95■□□□□ 0.62
CTDNEP1-207ENST00000572043 VSTM1Q6UX27 236 aa18.95■□□□□ 0.62
CTDNEP1-207ENST00000572043 BPIFB1Q8TDL5 484 aa18.95■□□□□ 0.62
CTDNEP1-207ENST00000572043 TAS1R2Q8TE23 839 aa18.95■□□□□ 0.62
CTDNEP1-207ENST00000572043 TIGD1Q96MW7 591 aa18.95■□□□□ 0.62
CTDNEP1-207ENST00000572043 MED10Q9BTT4 135 aa18.95■□□□□ 0.62
CTDNEP1-207ENST00000572043 B3GNT5Q9BYG0 378 aa18.95■□□□□ 0.62
CTDNEP1-207ENST00000572043 UXTQ9UBK9 157 aaPredicted RBP18.95■□□□□ 0.62
CTDNEP1-207ENST00000572043 CCL26Q9Y258 94 aa18.95■□□□□ 0.62
CTDNEP1-207ENST00000572043 ZNF318Q5VUA4 2279 aa18.95■□□□□ 0.62
CTDNEP1-207ENST00000572043 SHISA7A6NL88 538 aa18.94■□□□□ 0.62
CTDNEP1-207ENST00000572043 ARNTLO00327 626 aa18.94■□□□□ 0.62
CTDNEP1-207ENST00000572043 TRIM66O15016 1216 aa18.94■□□□□ 0.62
CTDNEP1-207ENST00000572043 CETN3O15182 167 aa18.94■□□□□ 0.62
CTDNEP1-207ENST00000572043 CHADO15335 359 aa18.94■□□□□ 0.62
CTDNEP1-207ENST00000572043 P4HA1P13674 534 aa18.94■□□□□ 0.62
CTDNEP1-207ENST00000572043 CCNE1P24864 410 aa18.94■□□□□ 0.62
CTDNEP1-207ENST00000572043 KPNA1P52294 538 aaPredicted RBP18.94■□□□□ 0.62
CTDNEP1-207ENST00000572043 PMS1P54277 932 aaKnown RBP18.94■□□□□ 0.62
CTDNEP1-207ENST00000572043 USP46P62068 366 aa18.94■□□□□ 0.62
CTDNEP1-207ENST00000572043 FCHO2Q0JRZ9 810 aa18.94■□□□□ 0.62
CTDNEP1-207ENST00000572043 EDRF1Q3B7T1 1238 aa18.94■□□□□ 0.62
CTDNEP1-207ENST00000572043 ACOT1Q86TX2 421 aa18.94■□□□□ 0.62
CTDNEP1-207ENST00000572043 CELF5Q8N6W0 485 aaKnown RBP18.94■□□□□ 0.62
CTDNEP1-207ENST00000572043 FAM3CQ92520 227 aa18.94■□□□□ 0.62
CTDNEP1-207ENST00000572043 USP13Q92995 863 aaPredicted RBP18.94■□□□□ 0.62
CTDNEP1-207ENST00000572043 TRMT2BQ96GJ1 504 aaKnown RBP18.94■□□□□ 0.62
CTDNEP1-207ENST00000572043 MYRFLQ96LU7 910 aa18.94■□□□□ 0.62
CTDNEP1-207ENST00000572043 TSG101Q99816 390 aa18.94■□□□□ 0.62
CTDNEP1-207ENST00000572043 BCO2Q9BYV7 579 aa18.94■□□□□ 0.62
CTDNEP1-207ENST00000572043 HMGXB4Q9UGU5 601 aa18.94■□□□□ 0.62
CTDNEP1-207ENST00000572043 CIZ1Q9ULV3 898 aaPredicted RBP18.94■□□□□ 0.62
CTDNEP1-207ENST00000572043 TRIOO75962 3097 aa18.93■□□□□ 0.62
CTDNEP1-207ENST00000572043 TRIM49BA6NDI0 452 aa18.93■□□□□ 0.62
CTDNEP1-207ENST00000572043 ASS1P00966 412 aaKnown RBP18.93■□□□□ 0.62
CTDNEP1-207ENST00000572043 EPB41P11171 864 aaKnown RBP18.93■□□□□ 0.62
CTDNEP1-207ENST00000572043 DDX6P26196 483 aaKnown RBP eCLIP18.93■□□□□ 0.62
CTDNEP1-207ENST00000572043 NDST1P52848 882 aa18.93■□□□□ 0.62
CTDNEP1-207ENST00000572043 TNK2Q07912 1038 aa18.93■□□□□ 0.62
CTDNEP1-207ENST00000572043 ANKRD40Q6AI12 368 aa18.93■□□□□ 0.62
CTDNEP1-207ENST00000572043 DENND5BQ6ZUT9 1274 aa18.93■□□□□ 0.62
CTDNEP1-207ENST00000572043 MON1AQ86VX9 555 aa18.93■□□□□ 0.62
CTDNEP1-207ENST00000572043 SPATA17Q96L03 361 aa18.93■□□□□ 0.62
CTDNEP1-207ENST00000572043 CYP2S1Q96SQ9 504 aa18.93■□□□□ 0.62
CTDNEP1-207ENST00000572043 IMPG2Q9BZV3 1241 aa18.93■□□□□ 0.62
CTDNEP1-207ENST00000572043 ELOVL4Q9GZR5 314 aa18.93■□□□□ 0.62
CTDNEP1-207ENST00000572043 APOBEC3GQ9HC16 384 aaKnown RBP18.93■□□□□ 0.62
CTDNEP1-207ENST00000572043 TMEM30AQ9NV96 361 aa18.93■□□□□ 0.62
CTDNEP1-207ENST00000572043 SPATA6Q9NWH7 488 aaPredicted RBP18.93■□□□□ 0.62
CTDNEP1-207ENST00000572043 OBP2AQ9NY56 170 aa18.93■□□□□ 0.62
CTDNEP1-207ENST00000572043 GTSE1Q9NYZ3 720 aa18.93■□□□□ 0.62
CTDNEP1-207ENST00000572043 MAN1B1Q9UKM7 699 aa18.93■□□□□ 0.62
CTDNEP1-207ENST00000572043 MRPS17Q9Y2R5 130 aaKnown RBP18.93■□□□□ 0.62
CTDNEP1-207ENST00000572043 C2orf78A6NCI8 922 aa18.92■□□□□ 0.62
CTDNEP1-207ENST00000572043 MAN2B1O00754 1011 aa18.92■□□□□ 0.62
CTDNEP1-207ENST00000572043 ASPAP45381 313 aa18.92■□□□□ 0.62
CTDNEP1-207ENST00000572043 NOP14P78316 857 aaKnown RBP18.92■□□□□ 0.62
CTDNEP1-207ENST00000572043 ARHGAP29Q52LW3 1261 aa18.92■□□□□ 0.62
CTDNEP1-207ENST00000572043 DCAF17Q5H9S7 520 aaPredicted RBP18.92■□□□□ 0.62
CTDNEP1-207ENST00000572043 FRMD5Q7Z6J6 570 aa18.92■□□□□ 0.62
CTDNEP1-207ENST00000572043 C1orf210Q8IVY1 113 aa18.92■□□□□ 0.62
CTDNEP1-207ENST00000572043 ARL14EPQ8N8R7 260 aaPredicted RBP18.92■□□□□ 0.62
CTDNEP1-207ENST00000572043 SPATA20Q8TB22 786 aa18.92■□□□□ 0.62
CTDNEP1-207ENST00000572043 RIN3Q8TB24 985 aa18.92■□□□□ 0.62
CTDNEP1-207ENST00000572043 TAF4BQ92750 862 aa18.92■□□□□ 0.62
CTDNEP1-207ENST00000572043 TNIP3Q96KP6 325 aa18.92■□□□□ 0.62
CTDNEP1-207ENST00000572043 SLC22A12Q96S37 553 aa18.92■□□□□ 0.62
CTDNEP1-207ENST00000572043 TMEM8AQ9HCN3 771 aa18.92■□□□□ 0.62
CTDNEP1-207ENST00000572043 TRPV5Q9NQA5 729 aa18.92■□□□□ 0.62
CTDNEP1-207ENST00000572043 TDP1Q9NUW8 608 aa18.92■□□□□ 0.62
CTDNEP1-207ENST00000572043 THG1LQ9NWX6 298 aaKnown RBP18.92■□□□□ 0.62
CTDNEP1-207ENST00000572043 TRAV19A0A0A6YYK7 116 aa18.91■□□□□ 0.62
CTDNEP1-207ENST00000572043 BIN1O00499 593 aa18.91■□□□□ 0.62
CTDNEP1-207ENST00000572043 ABL1P00519 1130 aa18.91■□□□□ 0.62
CTDNEP1-207ENST00000572043 CKMP06732 381 aa18.91■□□□□ 0.62
CTDNEP1-207ENST00000572043 CCDC130P13994 396 aa18.91■□□□□ 0.62
CTDNEP1-207ENST00000572043 CD58P19256 250 aa18.91■□□□□ 0.62
CTDNEP1-207ENST00000572043 WEE1P30291 646 aa18.91■□□□□ 0.62
CTDNEP1-207ENST00000572043 TCERG1LQ5VWI1 586 aa18.91■□□□□ 0.62
CTDNEP1-207ENST00000572043 TRIM68Q6AZZ1 485 aa18.91■□□□□ 0.62
CTDNEP1-207ENST00000572043 KLHL10Q6JEL2 608 aa18.91■□□□□ 0.62
CTDNEP1-207ENST00000572043 FAM35AQ86V20 835 aa18.91■□□□□ 0.62
CTDNEP1-207ENST00000572043 ADSSL1Q8N142 457 aa18.91■□□□□ 0.62
CTDNEP1-207ENST00000572043 C8orf48Q96LL4 319 aa18.91■□□□□ 0.62
CTDNEP1-207ENST00000572043 KCNK16Q96T55 309 aa18.91■□□□□ 0.62
CTDNEP1-207ENST00000572043 NELL2Q99435 816 aa18.91■□□□□ 0.62
CTDNEP1-207ENST00000572043 OSBPL6Q9BZF3 934 aa18.91■□□□□ 0.62
CTDNEP1-207ENST00000572043 GKN1Q9NS71 199 aa18.91■□□□□ 0.62
CTDNEP1-207ENST00000572043 FAM49BQ9NUQ9 324 aa18.91■□□□□ 0.62
CTDNEP1-207ENST00000572043 ZMYM5Q9UJ78 669 aa18.91■□□□□ 0.62
CTDNEP1-207ENST00000572043 NCAM2O15394 837 aa18.9■□□□□ 0.62
CTDNEP1-207ENST00000572043 CD44P16070 742 aaKnown RBP18.9■□□□□ 0.62
CTDNEP1-207ENST00000572043 KRT39Q6A163 491 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms