RNA–Protein interactions for RNA: ENST00000571886.1

GTF3C1-213, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 721 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-213ENST00000571886 BEST1O76090 585 aa10.9□□□□□ -0.66
GTF3C1-213ENST00000571886 PRAMEF12O95522 483 aa10.9□□□□□ -0.66
GTF3C1-213ENST00000571886 CCDC130P13994 396 aa10.9□□□□□ -0.66
GTF3C1-213ENST00000571886 CD72P21854 359 aa10.9□□□□□ -0.66
GTF3C1-213ENST00000571886 CDC25CP30307 473 aa10.9□□□□□ -0.66
GTF3C1-213ENST00000571886 SLC44A4Q53GD3 710 aa10.9□□□□□ -0.66
GTF3C1-213ENST00000571886 TCERG1LQ5VWI1 586 aa10.9□□□□□ -0.66
GTF3C1-213ENST00000571886 SUGP1Q8IWZ8 645 aaKnown RBP10.9□□□□□ -0.66
GTF3C1-213ENST00000571886 CRYBG2Q8N1P7 616 aa10.9□□□□□ -0.66
GTF3C1-213ENST00000571886 MAB21L3Q8N8X9 362 aa10.9□□□□□ -0.66
GTF3C1-213ENST00000571886 ZMIZ2Q8NF64 920 aa10.9□□□□□ -0.66
GTF3C1-213ENST00000571886 PRSS33Q8NF86 280 aa10.9□□□□□ -0.66
GTF3C1-213ENST00000571886 RIN3Q8TB24 985 aa10.9□□□□□ -0.66
GTF3C1-213ENST00000571886 TAF4BQ92750 862 aa10.9□□□□□ -0.66
GTF3C1-213ENST00000571886 SLC35C1Q96A29 364 aa10.9□□□□□ -0.66
GTF3C1-213ENST00000571886 SPATA17Q96L03 361 aa10.9□□□□□ -0.66
GTF3C1-213ENST00000571886 MYRFLQ96LU7 910 aa10.9□□□□□ -0.66
GTF3C1-213ENST00000571886 IPO9Q96P70 1041 aaKnown RBP10.9□□□□□ -0.66
GTF3C1-213ENST00000571886 SLC22A12Q96S37 553 aa10.9□□□□□ -0.66
GTF3C1-213ENST00000571886 KCNK16Q96T55 309 aa10.9□□□□□ -0.66
GTF3C1-213ENST00000571886 ARID3AQ99856 593 aa10.9□□□□□ -0.66
GTF3C1-213ENST00000571886 GTPBP4Q9BZE4 634 aaKnown RBP10.9□□□□□ -0.66
GTF3C1-213ENST00000571886 GPR88Q9GZN0 384 aa10.9□□□□□ -0.66
GTF3C1-213ENST00000571886 ELOVL4Q9GZR5 314 aa10.9□□□□□ -0.66
GTF3C1-213ENST00000571886 MFSD1Q9H3U5 465 aa10.9□□□□□ -0.66
GTF3C1-213ENST00000571886 CLSTN2Q9H4D0 955 aa10.9□□□□□ -0.66
GTF3C1-213ENST00000571886 TASP1Q9H6P5 420 aa10.9□□□□□ -0.66
GTF3C1-213ENST00000571886 RAB20Q9NX57 234 aa10.9□□□□□ -0.66
GTF3C1-213ENST00000571886 MTF2Q9Y483 593 aaPredicted RBP10.9□□□□□ -0.66
GTF3C1-213ENST00000571886 ARIH1Q9Y4X5 557 aaPredicted RBP10.9□□□□□ -0.66
GTF3C1-213ENST00000571886 ZDBF2Q9HCK1 2354 aa10.9□□□□□ -0.66
GTF3C1-213ENST00000571886 CD58P19256 250 aa10.89□□□□□ -0.67
GTF3C1-213ENST00000571886 GDI1P31150 447 aa10.89□□□□□ -0.67
GTF3C1-213ENST00000571886 MXI1P50539 228 aa10.89□□□□□ -0.67
GTF3C1-213ENST00000571886 INCA1Q0VD86 236 aa10.89□□□□□ -0.67
GTF3C1-213ENST00000571886 PAK1Q13153 545 aa10.89□□□□□ -0.67
GTF3C1-213ENST00000571886 STIM1Q13586 685 aa10.89□□□□□ -0.67
GTF3C1-213ENST00000571886 MAPRE1Q15691 268 aaKnown RBP10.89□□□□□ -0.67
GTF3C1-213ENST00000571886 ZNF394Q53GI3 561 aa10.89□□□□□ -0.67
GTF3C1-213ENST00000571886 ARHGAP15Q53QZ3 475 aa10.89□□□□□ -0.67
GTF3C1-213ENST00000571886 ASTLQ6HA08 431 aaPredicted RBP10.89□□□□□ -0.67
GTF3C1-213ENST00000571886 VSTM1Q6UX27 236 aa10.89□□□□□ -0.67
GTF3C1-213ENST00000571886 FRMD5Q7Z6J6 570 aa10.89□□□□□ -0.67
GTF3C1-213ENST00000571886 FAM35AQ86V20 835 aa10.89□□□□□ -0.67
GTF3C1-213ENST00000571886 MFSD6LQ8IWD5 586 aa10.89□□□□□ -0.67
GTF3C1-213ENST00000571886 FUKQ8N0W3 1084 aa10.89□□□□□ -0.67
GTF3C1-213ENST00000571886 FBXL13Q8NEE6 735 aa10.89□□□□□ -0.67
GTF3C1-213ENST00000571886 GPT2Q8TD30 523 aa10.89□□□□□ -0.67
GTF3C1-213ENST00000571886 TRMT2BQ96GJ1 504 aaKnown RBP10.89□□□□□ -0.67
GTF3C1-213ENST00000571886 ZFYVE19Q96K21 471 aa10.89□□□□□ -0.67
GTF3C1-213ENST00000571886 C8orf48Q96LL4 319 aa10.89□□□□□ -0.67
GTF3C1-213ENST00000571886 CEP63Q96MT8 703 aa10.89□□□□□ -0.67
GTF3C1-213ENST00000571886 CYP2S1Q96SQ9 504 aa10.89□□□□□ -0.67
GTF3C1-213ENST00000571886 SMOQ99835 787 aa10.89□□□□□ -0.67
GTF3C1-213ENST00000571886 TRMT61BQ9BVS5 477 aaKnown RBP10.89□□□□□ -0.67
GTF3C1-213ENST00000571886 SRRTQ9BXP5 876 aaKnown RBP10.89□□□□□ -0.67
GTF3C1-213ENST00000571886 FOXQ1Q9C009 403 aa10.89□□□□□ -0.67
GTF3C1-213ENST00000571886 TBC1D17Q9HA65 648 aa10.89□□□□□ -0.67
GTF3C1-213ENST00000571886 ARHGEF3Q9NR81 526 aa10.89□□□□□ -0.67
GTF3C1-213ENST00000571886 HEBP1Q9NRV9 189 aa10.89□□□□□ -0.67
GTF3C1-213ENST00000571886 FAM49BQ9NUQ9 324 aa10.89□□□□□ -0.67
GTF3C1-213ENST00000571886 ARMCX3Q9UH62 379 aaPredicted RBP10.89□□□□□ -0.67
GTF3C1-213ENST00000571886 CCL26Q9Y258 94 aa10.89□□□□□ -0.67
GTF3C1-213ENST00000571886 COQ4Q9Y3A0 265 aa10.89□□□□□ -0.67
GTF3C1-213ENST00000571886 C2orf78A6NCI8 922 aa10.88□□□□□ -0.67
GTF3C1-213ENST00000571886 ARNTLO00327 626 aa10.88□□□□□ -0.67
GTF3C1-213ENST00000571886 STK25O00506 426 aa10.88□□□□□ -0.67
GTF3C1-213ENST00000571886 CILPO75339 1184 aa10.88□□□□□ -0.67
GTF3C1-213ENST00000571886 FGF19O95750 216 aa10.88□□□□□ -0.67
GTF3C1-213ENST00000571886 DCNP07585 359 aaKnown RBP10.88□□□□□ -0.67
GTF3C1-213ENST00000571886 P4HA1P13674 534 aa10.88□□□□□ -0.67
GTF3C1-213ENST00000571886 GLULP15104 373 aa10.88□□□□□ -0.67
GTF3C1-213ENST00000571886 PSMC3P17980 439 aa10.88□□□□□ -0.67
GTF3C1-213ENST00000571886 PPP1R2P41236 205 aa10.88□□□□□ -0.67
GTF3C1-213ENST00000571886 FMO5P49326 533 aa10.88□□□□□ -0.67
GTF3C1-213ENST00000571886 PGFP49763 221 aa10.88□□□□□ -0.67
GTF3C1-213ENST00000571886 CLCN5P51795 746 aa10.88□□□□□ -0.67
GTF3C1-213ENST00000571886 STARD6P59095 220 aa10.88□□□□□ -0.67
GTF3C1-213ENST00000571886 ZXDBP98169 803 aa10.88□□□□□ -0.67
GTF3C1-213ENST00000571886 TCF15Q12870 199 aa10.88□□□□□ -0.67
GTF3C1-213ENST00000571886 IFRD2Q12894 506 aaPredicted RBP10.88□□□□□ -0.67
GTF3C1-213ENST00000571886 LRMPQ12912 555 aa10.88□□□□□ -0.67
GTF3C1-213ENST00000571886 MLF2Q15773 248 aaPredicted RBP10.88□□□□□ -0.67
GTF3C1-213ENST00000571886 CCDC40Q4G0X9 1142 aa10.88□□□□□ -0.67
GTF3C1-213ENST00000571886 DENND5BQ6ZUT9 1274 aa10.88□□□□□ -0.67
GTF3C1-213ENST00000571886 MON1AQ86VX9 555 aa10.88□□□□□ -0.67
GTF3C1-213ENST00000571886 UNC93AQ86WB7 457 aa10.88□□□□□ -0.67
GTF3C1-213ENST00000571886 CMTM8Q8IZV2 173 aa10.88□□□□□ -0.67
GTF3C1-213ENST00000571886 TRIML1Q8N9V2 468 aa10.88□□□□□ -0.67
GTF3C1-213ENST00000571886 SCAMP5Q8TAC9 235 aa10.88□□□□□ -0.67
GTF3C1-213ENST00000571886 LMO3Q8TAP4 145 aa10.88□□□□□ -0.67
GTF3C1-213ENST00000571886 SLC2A14Q8TDB8 520 aa10.88□□□□□ -0.67
GTF3C1-213ENST00000571886 USP13Q92995 863 aaPredicted RBP10.88□□□□□ -0.67
GTF3C1-213ENST00000571886 MED10Q9BTT4 135 aa10.88□□□□□ -0.67
GTF3C1-213ENST00000571886 NIF3L1Q9GZT8 377 aa10.88□□□□□ -0.67
GTF3C1-213ENST00000571886 BRD9Q9H8M2 597 aa10.88□□□□□ -0.67
GTF3C1-213ENST00000571886 CYP3A43Q9HB55 503 aa10.88□□□□□ -0.67
GTF3C1-213ENST00000571886 GCNT4Q9P109 453 aa10.88□□□□□ -0.67
GTF3C1-213ENST00000571886 HCN4Q9Y3Q4 1203 aa10.88□□□□□ -0.67
GTF3C1-213ENST00000571886 WDFY4Q6ZS81 3184 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms