RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 TRMT61BQ9BVS5 477 aaKnown RBP13.89□□□□□ -0.19
CNOT1-220ENST00000569916 B3GNT5Q9BYG0 378 aa13.89□□□□□ -0.19
CNOT1-220ENST00000569916 BCO2Q9BYV7 579 aa13.89□□□□□ -0.19
CNOT1-220ENST00000569916 ZNF518BQ9C0D4 1074 aa13.89□□□□□ -0.19
CNOT1-220ENST00000569916 TASP1Q9H6P5 420 aa13.89□□□□□ -0.19
CNOT1-220ENST00000569916 APOBEC3GQ9HC16 384 aaKnown RBP13.89□□□□□ -0.19
CNOT1-220ENST00000569916 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.89□□□□□ -0.198e-9■■■■■ 161.5
CNOT1-220ENST00000569916 TMEM30AQ9NV96 361 aa13.89□□□□□ -0.19
CNOT1-220ENST00000569916 HMGXB4Q9UGU5 601 aa13.89□□□□□ -0.19
CNOT1-220ENST00000569916 MYH10P35580 1976 aa13.89□□□□□ -0.19
CNOT1-220ENST00000569916 MYO16Q9Y6X6 1858 aa13.89□□□□□ -0.19
CNOT1-220ENST00000569916 PPP1R3GB7ZBB8 358 aa13.88□□□□□ -0.19
CNOT1-220ENST00000569916 BIN1O00499 593 aa13.88□□□□□ -0.19
CNOT1-220ENST00000569916 CLDN5O00501 218 aa13.88□□□□□ -0.19
CNOT1-220ENST00000569916 TRIM66O15016 1216 aa13.88□□□□□ -0.19
CNOT1-220ENST00000569916 LRRN2O75325 713 aa13.88□□□□□ -0.19
CNOT1-220ENST00000569916 GDI1P31150 447 aa13.88□□□□□ -0.19
CNOT1-220ENST00000569916 GRIK1P39086 918 aa13.88□□□□□ -0.19
CNOT1-220ENST00000569916 PLA2G5P39877 138 aa13.88□□□□□ -0.19
CNOT1-220ENST00000569916 MXI1P50539 228 aa13.88□□□□□ -0.19
CNOT1-220ENST00000569916 NUBP1P53384 320 aa13.88□□□□□ -0.19
CNOT1-220ENST00000569916 STARD6P59095 220 aa13.88□□□□□ -0.19
CNOT1-220ENST00000569916 PRKCQQ04759 706 aa13.88□□□□□ -0.19
CNOT1-220ENST00000569916 FCHO2Q0JRZ9 810 aa13.88□□□□□ -0.19
CNOT1-220ENST00000569916 TCF15Q12870 199 aa13.88□□□□□ -0.19
CNOT1-220ENST00000569916 SLC44A4Q53GD3 710 aa13.88□□□□□ -0.19
CNOT1-220ENST00000569916 TTI2Q6NXR4 508 aa13.88□□□□□ -0.19
CNOT1-220ENST00000569916 GPIHBP1Q8IV16 184 aa13.88□□□□□ -0.19
CNOT1-220ENST00000569916 MFSD6LQ8IWD5 586 aa13.88□□□□□ -0.19
CNOT1-220ENST00000569916 CEP295NLQ96MC4 621 aa13.88□□□□□ -0.19
CNOT1-220ENST00000569916 PRRX2Q99811 253 aa13.88□□□□□ -0.19
CNOT1-220ENST00000569916 DDX23Q9BUQ8 820 aaKnown RBP13.88□□□□□ -0.19
CNOT1-220ENST00000569916 SLC46A2Q9BY10 475 aa13.88□□□□□ -0.19
CNOT1-220ENST00000569916 IMPG2Q9BZV3 1241 aa13.88□□□□□ -0.19
CNOT1-220ENST00000569916 ELOVL4Q9GZR5 314 aa13.88□□□□□ -0.19
CNOT1-220ENST00000569916 BRD9Q9H8M2 597 aa13.88□□□□□ -0.19
CNOT1-220ENST00000569916 OBP2AQ9NY56 170 aa13.88□□□□□ -0.19
CNOT1-220ENST00000569916 UXTQ9UBK9 157 aaPredicted RBP13.88□□□□□ -0.19
CNOT1-220ENST00000569916 ZMYM5Q9UJ78 669 aa13.88□□□□□ -0.19
CNOT1-220ENST00000569916 F8VP50 259 aa13.87□□□□□ -0.19
CNOT1-220ENST00000569916 ARNTLO00327 626 aa13.87□□□□□ -0.19
CNOT1-220ENST00000569916 STX10O60499 249 aa13.87□□□□□ -0.19
CNOT1-220ENST00000569916 RFX1P22670 979 aa13.87□□□□□ -0.19
CNOT1-220ENST00000569916 DDX6P26196 483 aaKnown RBP eCLIP13.87□□□□□ -0.19
CNOT1-220ENST00000569916 ANXA13P27216 316 aa13.87□□□□□ -0.19
CNOT1-220ENST00000569916 NDST1P52848 882 aa13.87□□□□□ -0.19
CNOT1-220ENST00000569916 USP46P62068 366 aa13.87□□□□□ -0.19
CNOT1-220ENST00000569916 INCA1Q0VD86 236 aa13.87□□□□□ -0.19
CNOT1-220ENST00000569916 ORC1Q13415 861 aa13.87□□□□□ -0.19
CNOT1-220ENST00000569916 CBWD6Q4V339 395 aa13.87□□□□□ -0.19
CNOT1-220ENST00000569916 DCAF17Q5H9S7 520 aaPredicted RBP13.87□□□□□ -0.19
CNOT1-220ENST00000569916 CBWD3Q5JTY5 395 aa13.87□□□□□ -0.19
CNOT1-220ENST00000569916 CBWD5Q5RIA9 395 aa13.87□□□□□ -0.19
CNOT1-220ENST00000569916 TCERG1LQ5VWI1 586 aa13.87□□□□□ -0.19
CNOT1-220ENST00000569916 TXNDC8Q6A555 127 aa13.87□□□□□ -0.19
CNOT1-220ENST00000569916 KLHL10Q6JEL2 608 aa13.87□□□□□ -0.19
CNOT1-220ENST00000569916 FOXR2Q6PJQ5 311 aa13.87□□□□□ -0.19
CNOT1-220ENST00000569916 ACOT1Q86TX2 421 aa13.87□□□□□ -0.19
CNOT1-220ENST00000569916 FAM35AQ86V20 835 aa13.87□□□□□ -0.19
CNOT1-220ENST00000569916 UNC93AQ86WB7 457 aa13.87□□□□□ -0.19
CNOT1-220ENST00000569916 CMTM8Q8IZV2 173 aa13.87□□□□□ -0.19
CNOT1-220ENST00000569916 MAB21L3Q8N8X9 362 aa13.87□□□□□ -0.19
CNOT1-220ENST00000569916 NELFBQ8WX92 580 aa13.87□□□□□ -0.19
CNOT1-220ENST00000569916 SEMA4DQ92854 862 aa13.87□□□□□ -0.19
CNOT1-220ENST00000569916 IRF7Q92985 503 aa13.87□□□□□ -0.19
CNOT1-220ENST00000569916 SHDQ96IW2 340 aa13.87□□□□□ -0.19
CNOT1-220ENST00000569916 TNIP3Q96KP6 325 aa13.87□□□□□ -0.19
CNOT1-220ENST00000569916 C8orf48Q96LL4 319 aa13.87□□□□□ -0.19
CNOT1-220ENST00000569916 LRRC3BQ96PB8 259 aa13.87□□□□□ -0.19
CNOT1-220ENST00000569916 DUSP9Q99956 384 aaKnown RBP13.87□□□□□ -0.19
CNOT1-220ENST00000569916 FOXQ1Q9C009 403 aa13.87□□□□□ -0.19
CNOT1-220ENST00000569916 NIF3L1Q9GZT8 377 aa13.87□□□□□ -0.19
CNOT1-220ENST00000569916 SMG9Q9H0W8 520 aaKnown RBP13.87□□□□□ -0.19
CNOT1-220ENST00000569916 TRPV5Q9NQA5 729 aa13.87□□□□□ -0.19
CNOT1-220ENST00000569916 HEBP1Q9NRV9 189 aa13.87□□□□□ -0.19
CNOT1-220ENST00000569916 CTNND2Q9UQB3 1225 aa13.87□□□□□ -0.19
CNOT1-220ENST00000569916 SHISA7A6NL88 538 aa13.86□□□□□ -0.19
CNOT1-220ENST00000569916 SOBPA7XYQ1 873 aa13.86□□□□□ -0.19
CNOT1-220ENST00000569916 STK25O00506 426 aa13.86□□□□□ -0.19
CNOT1-220ENST00000569916 GALR2O43603 387 aaPredicted RBP13.86□□□□□ -0.19
CNOT1-220ENST00000569916 NHLH1Q02575 133 aa13.86□□□□□ -0.19
CNOT1-220ENST00000569916 CAMK4Q16566 473 aa13.86□□□□□ -0.19
CNOT1-220ENST00000569916 CLEC17AQ6ZS10 378 aa13.86□□□□□ -0.19
CNOT1-220ENST00000569916 TPRG1Q6ZUI0 275 aa13.86□□□□□ -0.19
CNOT1-220ENST00000569916 DENND5BQ6ZUT9 1274 aa13.86□□□□□ -0.19
CNOT1-220ENST00000569916 PAQR9Q6ZVX9 377 aa13.86□□□□□ -0.19
CNOT1-220ENST00000569916 MON1AQ86VX9 555 aa13.86□□□□□ -0.19
CNOT1-220ENST00000569916 CCDC105Q8IYK2 499 aa13.86□□□□□ -0.19
CNOT1-220ENST00000569916 FUKQ8N0W3 1084 aa13.86□□□□□ -0.19
CNOT1-220ENST00000569916 CRYBG2Q8N1P7 616 aa13.86□□□□□ -0.19
CNOT1-220ENST00000569916 TRIML1Q8N9V2 468 aa13.86□□□□□ -0.19
CNOT1-220ENST00000569916 FBXL13Q8NEE6 735 aa13.86□□□□□ -0.19
CNOT1-220ENST00000569916 PJA1Q8NG27 643 aa13.86□□□□□ -0.19
CNOT1-220ENST00000569916 MRPS31Q92665 395 aaKnown RBP13.86□□□□□ -0.19
CNOT1-220ENST00000569916 SLC35C1Q96A29 364 aa13.86□□□□□ -0.19
CNOT1-220ENST00000569916 FAM122AQ96E09 287 aa13.86□□□□□ -0.19
CNOT1-220ENST00000569916 CEP63Q96MT8 703 aa13.86□□□□□ -0.19
CNOT1-220ENST00000569916 TWNKQ96RR1 684 aa13.86□□□□□ -0.19
CNOT1-220ENST00000569916 TTLL2Q9BWV7 592 aa13.86□□□□□ -0.19
CNOT1-220ENST00000569916 CYP3A43Q9HB55 503 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms