RNA–Protein interactions for RNA: ENST00000569122.1

SMG1-216, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-216ENST00000569122 ATXN7O15265 892 aaPredicted RBP9.34□□□□□ -0.91
SMG1-216ENST00000569122 SLC16A4O15374 487 aa9.34□□□□□ -0.91
SMG1-216ENST00000569122 HIP1RO75146 1068 aa9.34□□□□□ -0.91
SMG1-216ENST00000569122 NOL4O94818 638 aa9.34□□□□□ -0.91
SMG1-216ENST00000569122 KAT7O95251 611 aa9.34□□□□□ -0.91
SMG1-216ENST00000569122 ADH1CP00326 375 aa9.34□□□□□ -0.91
SMG1-216ENST00000569122 ABCD1P33897 745 aa9.34□□□□□ -0.91
SMG1-216ENST00000569122 TIE1P35590 1138 aa9.34□□□□□ -0.91
SMG1-216ENST00000569122 OPRD1P41143 372 aa9.34□□□□□ -0.91
SMG1-216ENST00000569122 TAF6P49848 677 aa9.34□□□□□ -0.91
SMG1-216ENST00000569122 SPAG1Q07617 926 aa9.34□□□□□ -0.91
SMG1-216ENST00000569122 SCRN1Q12765 414 aa9.34□□□□□ -0.91
SMG1-216ENST00000569122 PDIA5Q14554 519 aa9.34□□□□□ -0.91
SMG1-216ENST00000569122 SUZ12Q15022 739 aaKnown RBP9.34□□□□□ -0.91
SMG1-216ENST00000569122 C9orf57Q5W0N0 161 aa9.34□□□□□ -0.91
SMG1-216ENST00000569122 SDE2Q6IQ49 451 aa9.34□□□□□ -0.91
SMG1-216ENST00000569122 IL27RAQ6UWB1 636 aa9.34□□□□□ -0.91
SMG1-216ENST00000569122 LRRC69Q6ZNQ3 347 aa9.34□□□□□ -0.91
SMG1-216ENST00000569122 TAS1R3Q7RTX0 852 aa9.34□□□□□ -0.91
SMG1-216ENST00000569122 DIS3L2Q8IYB7 885 aaKnown RBP9.34□□□□□ -0.91
SMG1-216ENST00000569122 RGL4Q8IZJ4 473 aa9.34□□□□□ -0.91
SMG1-216ENST00000569122 KCTD17Q8N5Z5 321 aa9.34□□□□□ -0.91
SMG1-216ENST00000569122 PNPLA1Q8N8W4 532 aa9.34□□□□□ -0.91
SMG1-216ENST00000569122 SETD7Q8WTS6 366 aaKnown RBP9.34□□□□□ -0.91
SMG1-216ENST00000569122 LEO1Q8WVC0 666 aaPredicted RBP9.34□□□□□ -0.91
SMG1-216ENST00000569122 CEP295NLQ96MC4 621 aa9.34□□□□□ -0.91
SMG1-216ENST00000569122 YTHDC1Q96MU7 727 aaKnown RBP9.34□□□□□ -0.91
SMG1-216ENST00000569122 CAMK1GQ96NX5 476 aa9.34□□□□□ -0.91
SMG1-216ENST00000569122 TMEM60Q9H2L4 133 aa9.34□□□□□ -0.91
SMG1-216ENST00000569122 GJB4Q9NTQ9 266 aa9.34□□□□□ -0.91
SMG1-216ENST00000569122 ADAMTS20P59510 1910 aa9.34□□□□□ -0.91
SMG1-216ENST00000569122 ATXN2Q99700 1313 aaKnown RBP9.33□□□□□ -0.92
SMG1-216ENST00000569122 MAST4O15021 2626 aa9.33□□□□□ -0.92
SMG1-216ENST00000569122 TRABD2BA6NFA1 517 aa9.33□□□□□ -0.92
SMG1-216ENST00000569122 SGK1O00141 431 aa9.33□□□□□ -0.92
SMG1-216ENST00000569122 PIRO00625 290 aa9.33□□□□□ -0.92
SMG1-216ENST00000569122 OGTO15294 1046 aa9.33□□□□□ -0.92
SMG1-216ENST00000569122 PFKFB2O60825 505 aa9.33□□□□□ -0.92
SMG1-216ENST00000569122 NDUFS2O75306 463 aa9.33□□□□□ -0.92
SMG1-216ENST00000569122 GJB3O75712 270 aa9.33□□□□□ -0.92
SMG1-216ENST00000569122 ADRB2P07550 413 aa9.33□□□□□ -0.92
SMG1-216ENST00000569122 ZNF883P0CG24 379 aa9.33□□□□□ -0.92
SMG1-216ENST00000569122 PLS3P13797 630 aa9.33□□□□□ -0.92
SMG1-216ENST00000569122 PLA2G2AP14555 144 aa9.33□□□□□ -0.92
SMG1-216ENST00000569122 GUCY2CP25092 1073 aa9.33□□□□□ -0.92
SMG1-216ENST00000569122 PNPLA4P41247 253 aa9.33□□□□□ -0.92
SMG1-216ENST00000569122 PPP3CCP48454 512 aa9.33□□□□□ -0.92
SMG1-216ENST00000569122 LIG4P49917 911 aa9.33□□□□□ -0.92
SMG1-216ENST00000569122 FXR2P51116 673 aaKnown RBP eCLIP9.33□□□□□ -0.928e-7■□□□□ 10.7
SMG1-216ENST00000569122 CYP4F3Q08477 520 aa9.33□□□□□ -0.92
SMG1-216ENST00000569122 RESTQ13127 1097 aa9.33□□□□□ -0.92
SMG1-216ENST00000569122 TMEM132DQ14C87 1099 aa9.33□□□□□ -0.92
SMG1-216ENST00000569122 ANKRD1Q15327 319 aa9.33□□□□□ -0.92
SMG1-216ENST00000569122 SEZ6Q53EL9 994 aa9.33□□□□□ -0.92
SMG1-216ENST00000569122 DDX42Q86XP3 938 aaKnown RBP eCLIP9.33□□□□□ -0.92
SMG1-216ENST00000569122 ADGRG2Q8IZP9 1017 aa9.33□□□□□ -0.92
SMG1-216ENST00000569122 ARL14EPQ8N8R7 260 aaPredicted RBP9.33□□□□□ -0.92
SMG1-216ENST00000569122 TRIML1Q8N9V2 468 aa9.33□□□□□ -0.92
SMG1-216ENST00000569122 SPRYD3Q8NCJ5 442 aa9.33□□□□□ -0.92
SMG1-216ENST00000569122 TMEM161BQ8NDZ6 487 aa9.33□□□□□ -0.92
SMG1-216ENST00000569122 RIN3Q8TB24 985 aa9.33□□□□□ -0.92
SMG1-216ENST00000569122 ZNF419Q96HQ0 510 aaPredicted RBP9.33□□□□□ -0.92
SMG1-216ENST00000569122 CYP2S1Q96SQ9 504 aa9.33□□□□□ -0.92
SMG1-216ENST00000569122 PYM1Q9BRP8 204 aaKnown RBP9.33□□□□□ -0.92
SMG1-216ENST00000569122 CCSER1Q9C0I3 900 aa9.33□□□□□ -0.92
SMG1-216ENST00000569122 LINC00597Q9H2U6 94 aa9.33□□□□□ -0.92
SMG1-216ENST00000569122 ASB7Q9H672 318 aa9.33□□□□□ -0.92
SMG1-216ENST00000569122 ARHGEF4Q9NR80 690 aa9.33□□□□□ -0.92
SMG1-216ENST00000569122 DDX19AQ9NUU7 478 aaKnown RBP9.33□□□□□ -0.92
SMG1-216ENST00000569122 LARSQ9P2J5 1176 aaKnown RBP9.33□□□□□ -0.92
SMG1-216ENST00000569122 TBC1D14Q9P2M4 693 aa9.33□□□□□ -0.92
SMG1-216ENST00000569122 LRWD1Q9UFC0 647 aa9.33□□□□□ -0.92
SMG1-216ENST00000569122 PCOLCE2Q9UKZ9 415 aa9.33□□□□□ -0.92
SMG1-216ENST00000569122 NFE2L3Q9Y4A8 694 aa9.33□□□□□ -0.92
SMG1-216ENST00000569122 RAI2Q9Y5P3 530 aa9.33□□□□□ -0.92
SMG1-216ENST00000569122 ASCC3Q8N3C0 2202 aaKnown RBP9.33□□□□□ -0.92
SMG1-216ENST00000569122 ACACAQ13085 2346 aa9.32□□□□□ -0.92
SMG1-216ENST00000569122 ANO9A1A5B4 782 aa9.32□□□□□ -0.92
SMG1-216ENST00000569122 TBC1D3BA6NDS4 549 aa9.32□□□□□ -0.92
SMG1-216ENST00000569122 J3QKU1 62 aa9.32□□□□□ -0.92
SMG1-216ENST00000569122 RRP8O43159 456 aaKnown RBP9.32□□□□□ -0.92
SMG1-216ENST00000569122 CBFA2T3O75081 653 aa9.32□□□□□ -0.92
SMG1-216ENST00000569122 CER1O95813 267 aa9.32□□□□□ -0.92
SMG1-216ENST00000569122 MAPTP10636 758 aaKnown RBP9.32□□□□□ -0.92
SMG1-216ENST00000569122 KIR2DL1P43626 348 aaPredicted RBP9.32□□□□□ -0.92
SMG1-216ENST00000569122 MYL7Q01449 175 aa9.32□□□□□ -0.92
SMG1-216ENST00000569122 POU5F1Q01860 360 aaKnown RBP9.32□□□□□ -0.92
SMG1-216ENST00000569122 DHCR24Q15392 516 aa9.32□□□□□ -0.92
SMG1-216ENST00000569122 ENOX2Q16206 610 aaKnown RBP9.32□□□□□ -0.92
SMG1-216ENST00000569122 SV2CQ496J9 727 aa9.32□□□□□ -0.92
SMG1-216ENST00000569122 KRT79Q5XKE5 535 aa9.32□□□□□ -0.92
SMG1-216ENST00000569122 BTBD8Q5XKL5 378 aa9.32□□□□□ -0.92
SMG1-216ENST00000569122 RINT1Q6NUQ1 792 aa9.32□□□□□ -0.92
SMG1-216ENST00000569122 C1orf186Q6ZWK4 172 aa9.32□□□□□ -0.92
SMG1-216ENST00000569122 LRRTM3Q86VH5 581 aa9.32□□□□□ -0.92
SMG1-216ENST00000569122 DAW1Q8N136 415 aa9.32□□□□□ -0.92
SMG1-216ENST00000569122 FRMD1Q8N878 549 aa9.32□□□□□ -0.92
SMG1-216ENST00000569122 KRI1Q8N9T8 703 aaKnown RBP9.32□□□□□ -0.92
SMG1-216ENST00000569122 FAM212AQ96EL1 285 aa9.32□□□□□ -0.92
SMG1-216ENST00000569122 FUBP3Q96I24 572 aaKnown RBP eCLIP9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 129.9 ms