RNA–Protein interactions for RNA: ENST00000569117.1

CDH3-210, Transcript of cadherin 3, humanhuman

TSL 5

Gene CDH3, Length 576 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-210ENST00000569117 ZNF677Q86XU0 584 aa11.08□□□□□ -0.64
CDH3-210ENST00000569117 TMEM139Q8IV31 216 aa11.08□□□□□ -0.64
CDH3-210ENST00000569117 DCP1BQ8IZD4 617 aaKnown RBP11.08□□□□□ -0.64
CDH3-210ENST00000569117 C12orf29Q8N999 325 aa11.08□□□□□ -0.64
CDH3-210ENST00000569117 MYCBPAPQ8TBZ2 947 aa11.08□□□□□ -0.64
CDH3-210ENST00000569117 TFAP2BQ92481 460 aa11.08□□□□□ -0.64
CDH3-210ENST00000569117 DDX1Q92499 740 aaKnown RBP11.08□□□□□ -0.64
CDH3-210ENST00000569117 MYLPFQ96A32 169 aa11.08□□□□□ -0.64
CDH3-210ENST00000569117 HEXIM2Q96MH2 286 aaKnown RBP11.08□□□□□ -0.64
CDH3-210ENST00000569117 TMEM209Q96SK2 561 aa11.08□□□□□ -0.64
CDH3-210ENST00000569117 ZSWIM1Q9BR11 485 aa11.08□□□□□ -0.64
CDH3-210ENST00000569117 RXFP1Q9HBX9 757 aa11.08□□□□□ -0.64
CDH3-210ENST00000569117 NGRNQ9NPE2 291 aaKnown RBP11.08□□□□□ -0.64
CDH3-210ENST00000569117 ACP6Q9NPH0 428 aa11.08□□□□□ -0.64
CDH3-210ENST00000569117 ENTPD7Q9NQZ7 604 aa11.08□□□□□ -0.64
CDH3-210ENST00000569117 ARHGAP20Q9P2F6 1191 aa11.08□□□□□ -0.64
CDH3-210ENST00000569117 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.08□□□□□ -0.64
CDH3-210ENST00000569117 CDY1Q9Y6F8 540 aa11.08□□□□□ -0.64
CDH3-210ENST00000569117 MYH10P35580 1976 aa11.08□□□□□ -0.64
CDH3-210ENST00000569117 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.07□□□□□ -0.64
CDH3-210ENST00000569117 SSU72P8A0A1W2PR75 194 aa11.07□□□□□ -0.64
CDH3-210ENST00000569117 MYBPHLA2RUH7 354 aa11.07□□□□□ -0.64
CDH3-210ENST00000569117 EPOPA6NHQ4 379 aa11.07□□□□□ -0.64
CDH3-210ENST00000569117 C2CD2LO14523 706 aa11.07□□□□□ -0.64
CDH3-210ENST00000569117 ARHGAP33O14559 1287 aa11.07□□□□□ -0.64
CDH3-210ENST00000569117 THAP12O43422 761 aa11.07□□□□□ -0.64
CDH3-210ENST00000569117 MED7O43513 233 aa11.07□□□□□ -0.64
CDH3-210ENST00000569117 CCDC130P13994 396 aa11.07□□□□□ -0.64
CDH3-210ENST00000569117 CPB1P15086 417 aa11.07□□□□□ -0.64
CDH3-210ENST00000569117 RPL17P18621 184 aaKnown RBP11.07□□□□□ -0.64
CDH3-210ENST00000569117 ERVFC1P60507 584 aa11.07□□□□□ -0.64
CDH3-210ENST00000569117 FMO1Q01740 532 aa11.07□□□□□ -0.64
CDH3-210ENST00000569117 CDR2Q01850 454 aa11.07□□□□□ -0.64
CDH3-210ENST00000569117 ROR1Q01973 937 aa11.07□□□□□ -0.64
CDH3-210ENST00000569117 SMARCB1Q12824 385 aa11.07□□□□□ -0.64
CDH3-210ENST00000569117 GPR17Q13304 367 aa11.07□□□□□ -0.64
CDH3-210ENST00000569117 BMS1Q14692 1282 aaKnown RBP11.07□□□□□ -0.64
CDH3-210ENST00000569117 NFE2Q16621 373 aaPredicted RBP11.07□□□□□ -0.64
CDH3-210ENST00000569117 CFAP221Q4G0U5 840 aa11.07□□□□□ -0.64
CDH3-210ENST00000569117 PLPP4Q5VZY2 271 aa11.07□□□□□ -0.64
CDH3-210ENST00000569117 LCLAT1Q6UWP7 414 aa11.07□□□□□ -0.64
CDH3-210ENST00000569117 C4orf50Q6ZRC1 276 aa11.07□□□□□ -0.64
CDH3-210ENST00000569117 ZNF571Q7Z3V5 609 aaPredicted RBP11.07□□□□□ -0.64
CDH3-210ENST00000569117 TMC7Q7Z402 723 aa11.07□□□□□ -0.64
CDH3-210ENST00000569117 FAM35AQ86V20 835 aa11.07□□□□□ -0.64
CDH3-210ENST00000569117 FUKQ8N0W3 1084 aa11.07□□□□□ -0.64
CDH3-210ENST00000569117 DEPDC4Q8N2C3 294 aa11.07□□□□□ -0.64
CDH3-210ENST00000569117 CCDC112Q8NEF3 446 aa11.07□□□□□ -0.64
CDH3-210ENST00000569117 SLC2A14Q8TDB8 520 aa11.07□□□□□ -0.64
CDH3-210ENST00000569117 GDPD5Q8WTR4 605 aa11.07□□□□□ -0.64
CDH3-210ENST00000569117 C2orf15Q8WU43 125 aaKnown RBP11.07□□□□□ -0.64
CDH3-210ENST00000569117 SLC20A1Q8WUM9 679 aa11.07□□□□□ -0.64
CDH3-210ENST00000569117 ZNF606Q8WXB4 792 aa11.07□□□□□ -0.64
CDH3-210ENST00000569117 AUTS2Q8WXX7 1259 aa11.07□□□□□ -0.64
CDH3-210ENST00000569117 CYFIP2Q96F07 1278 aa11.07□□□□□ -0.64
CDH3-210ENST00000569117 PCED1BQ96HM7 432 aa11.07□□□□□ -0.64
CDH3-210ENST00000569117 FUBP3Q96I24 572 aaKnown RBP eCLIP11.07□□□□□ -0.64
CDH3-210ENST00000569117 HNRNPABQ99729 332 aaKnown RBP11.07□□□□□ -0.64
CDH3-210ENST00000569117 CLSTN3Q9BQT9 956 aa11.07□□□□□ -0.64
CDH3-210ENST00000569117 HAUS4Q9H6D7 363 aa11.07□□□□□ -0.64
CDH3-210ENST00000569117 CERS4Q9HA82 394 aa11.07□□□□□ -0.64
CDH3-210ENST00000569117 ABCB6Q9NP58 842 aa11.07□□□□□ -0.64
CDH3-210ENST00000569117 FAM49BQ9NUQ9 324 aa11.07□□□□□ -0.64
CDH3-210ENST00000569117 GTF3C4Q9UKN8 822 aa11.07□□□□□ -0.64
CDH3-210ENST00000569117 TSPAN16Q9UKR8 245 aa11.07□□□□□ -0.64
CDH3-210ENST00000569117 ATP8B3O60423 1300 aa11.07□□□□□ -0.64
CDH3-210ENST00000569117 MTCL1Q9Y4B5 1905 aaKnown RBP11.06□□□□□ -0.64
CDH3-210ENST00000569117 WDR27A2RRH5 827 aa11.06□□□□□ -0.64
CDH3-210ENST00000569117 MTMR11A4FU01 709 aa11.06□□□□□ -0.64
CDH3-210ENST00000569117 C2orf71A6NGG8 1288 aa11.06□□□□□ -0.64
CDH3-210ENST00000569117 TEX28O15482 410 aa11.06□□□□□ -0.64
CDH3-210ENST00000569117 ADAM12O43184 909 aa11.06□□□□□ -0.64
CDH3-210ENST00000569117 LSM8O95777 96 aaKnown RBP11.06□□□□□ -0.64
CDH3-210ENST00000569117 CALCAP01258 141 aa11.06□□□□□ -0.64
CDH3-210ENST00000569117 PTMAP06454 111 aaKnown RBP11.06□□□□□ -0.64
CDH3-210ENST00000569117 ADH1AP07327 375 aa11.06□□□□□ -0.64
CDH3-210ENST00000569117 MMEP08473 750 aa11.06□□□□□ -0.64
CDH3-210ENST00000569117 PLEKP08567 350 aaPredicted RBP11.06□□□□□ -0.64
CDH3-210ENST00000569117 CNPP09543 421 aaKnown RBP11.06□□□□□ -0.64
CDH3-210ENST00000569117 OR4Q2P0C623 313 aa11.06□□□□□ -0.64
CDH3-210ENST00000569117 SKILP12757 684 aa11.06□□□□□ -0.64
CDH3-210ENST00000569117 CHRNB2P17787 502 aa11.06□□□□□ -0.64
CDH3-210ENST00000569117 OR1D2P34982 312 aa11.06□□□□□ -0.64
CDH3-210ENST00000569117 IRS1P35568 1242 aa11.06□□□□□ -0.64
CDH3-210ENST00000569117 BCAT1P54687 386 aa11.06□□□□□ -0.64
CDH3-210ENST00000569117 RAB33AQ14088 237 aa11.06□□□□□ -0.64
CDH3-210ENST00000569117 CNGA2Q16280 664 aa11.06□□□□□ -0.64
CDH3-210ENST00000569117 GOLGA7BQ2TAP0 167 aa11.06□□□□□ -0.64
CDH3-210ENST00000569117 SLC39A12Q504Y0 691 aa11.06□□□□□ -0.64
CDH3-210ENST00000569117 PKDCCQ504Y2 493 aa11.06□□□□□ -0.64
CDH3-210ENST00000569117 PPP1R26Q5T8A7 1209 aaPredicted RBP11.06□□□□□ -0.64
CDH3-210ENST00000569117 TPGS2Q68CL5 300 aa11.06□□□□□ -0.64
CDH3-210ENST00000569117 CYP26C1Q6V0L0 522 aa11.06□□□□□ -0.64
CDH3-210ENST00000569117 TRIM72Q6ZMU5 477 aa11.06□□□□□ -0.64
CDH3-210ENST00000569117 LRRTM3Q86VH5 581 aa11.06□□□□□ -0.64
CDH3-210ENST00000569117 LRRC8AQ8IWT6 810 aa11.06□□□□□ -0.64
CDH3-210ENST00000569117 MRPL43Q8N983 215 aaKnown RBP11.06□□□□□ -0.64
CDH3-210ENST00000569117 FAM174AQ8TBP5 190 aa11.06□□□□□ -0.64
CDH3-210ENST00000569117 SPPL2BQ8TCT7 592 aa11.06□□□□□ -0.64
CDH3-210ENST00000569117 SMARCD1Q96GM5 515 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms