RNA–Protein interactions for RNA: ENST00000567654.1

SF3B3-210, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 334 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-210ENST00000567654 TCP11Q8WWU5 503 aa6.18□□□□□ -1.42
SF3B3-210ENST00000567654 PSPC1Q8WXF1 523 aaKnown RBP6.18□□□□□ -1.42
SF3B3-210ENST00000567654 TRIB2Q92519 343 aa6.18□□□□□ -1.42
SF3B3-210ENST00000567654 SYN2Q92777 582 aaPredicted RBP6.18□□□□□ -1.42
SF3B3-210ENST00000567654 JAKMIP2Q96AA8 810 aa6.18□□□□□ -1.42
SF3B3-210ENST00000567654 APBA2Q99767 749 aa6.18□□□□□ -1.42
SF3B3-210ENST00000567654 ACO2Q99798 780 aaKnown RBP6.18□□□□□ -1.42
SF3B3-210ENST00000567654 FDXACB1Q9BRP7 624 aaPredicted RBP6.18□□□□□ -1.42
SF3B3-210ENST00000567654 SYT11Q9BT88 431 aa6.18□□□□□ -1.42
SF3B3-210ENST00000567654 PI4K2AQ9BTU6 479 aa6.18□□□□□ -1.42
SF3B3-210ENST00000567654 PACSIN1Q9BY11 444 aa6.18□□□□□ -1.42
SF3B3-210ENST00000567654 HAUS4Q9H6D7 363 aa6.18□□□□□ -1.42
SF3B3-210ENST00000567654 IFT122Q9HBG6 1241 aa6.18□□□□□ -1.42
SF3B3-210ENST00000567654 PDE11AQ9HCR9 933 aa6.18□□□□□ -1.42
SF3B3-210ENST00000567654 ACP6Q9NPH0 428 aa6.18□□□□□ -1.42
SF3B3-210ENST00000567654 ZNHIT6Q9NWK9 470 aaKnown RBP6.18□□□□□ -1.42
SF3B3-210ENST00000567654 APEX2Q9UBZ4 518 aa6.18□□□□□ -1.42
SF3B3-210ENST00000567654 TJP2Q9UDY2 1190 aa6.18□□□□□ -1.42
SF3B3-210ENST00000567654 FBXL5Q9UKA1 691 aa6.18□□□□□ -1.42
SF3B3-210ENST00000567654 AGO2Q9UKV8 859 aaKnown RBP6.18□□□□□ -1.42
SF3B3-210ENST00000567654 PAXBP1Q9Y5B6 917 aa6.18□□□□□ -1.42
SF3B3-210ENST00000567654 PCDHA13Q9Y5I0 950 aa6.18□□□□□ -1.42
SF3B3-210ENST00000567654 CAPN6Q9Y6Q1 641 aa6.18□□□□□ -1.42
SF3B3-210ENST00000567654 SSU72P8A0A1W2PR75 194 aa6.17□□□□□ -1.42
SF3B3-210ENST00000567654 H0YCG3 227 aa6.17□□□□□ -1.42
SF3B3-210ENST00000567654 KIF2AO00139 706 aaPredicted RBP6.17□□□□□ -1.42
SF3B3-210ENST00000567654 HAS3O00219 553 aa6.17□□□□□ -1.42
SF3B3-210ENST00000567654 FOXN3O00409 490 aaPredicted RBP6.17□□□□□ -1.42
SF3B3-210ENST00000567654 DDX3XO00571 662 aaKnown RBP eCLIP6.17□□□□□ -1.428e-9■■■□□ 15
SF3B3-210ENST00000567654 PJA2O43164 708 aa6.17□□□□□ -1.42
SF3B3-210ENST00000567654 AKR1B10O60218 316 aa6.17□□□□□ -1.42
SF3B3-210ENST00000567654 DNAJA2O60884 412 aa6.17□□□□□ -1.42
SF3B3-210ENST00000567654 PPFIA4O75335 1185 aa6.17□□□□□ -1.42
SF3B3-210ENST00000567654 F2P00734 622 aa6.17□□□□□ -1.42
SF3B3-210ENST00000567654 TGFB1P01137 390 aa6.17□□□□□ -1.42
SF3B3-210ENST00000567654 C4BPAP04003 597 aaKnown RBP6.17□□□□□ -1.42
SF3B3-210ENST00000567654 FAM87AP0C7U9 286 aa6.17□□□□□ -1.42
SF3B3-210ENST00000567654 DLATP10515 647 aaKnown RBP6.17□□□□□ -1.42
SF3B3-210ENST00000567654 FGFR4P22455 802 aa6.17□□□□□ -1.42
SF3B3-210ENST00000567654 SOX5P35711 763 aa6.17□□□□□ -1.42
SF3B3-210ENST00000567654 PTENP60484 403 aa6.17□□□□□ -1.42
SF3B3-210ENST00000567654 ZNF200P98182 395 aaPredicted RBP6.17□□□□□ -1.42
SF3B3-210ENST00000567654 KLHL30Q0D2K2 578 aa6.17□□□□□ -1.42
SF3B3-210ENST00000567654 TMEM62Q0P6H9 643 aa6.17□□□□□ -1.42
SF3B3-210ENST00000567654 STRN3Q13033 797 aa6.17□□□□□ -1.42
SF3B3-210ENST00000567654 PPFIA1Q13136 1202 aa6.17□□□□□ -1.42
SF3B3-210ENST00000567654 SLBPQ14493 270 aaKnown RBP eCLIP6.17□□□□□ -1.42
SF3B3-210ENST00000567654 PSMD6Q15008 389 aa6.17□□□□□ -1.42
SF3B3-210ENST00000567654 SLC9C1Q4G0N8 1177 aa6.17□□□□□ -1.42
SF3B3-210ENST00000567654 TDRD10Q5VZ19 366 aaKnown RBP6.17□□□□□ -1.42
SF3B3-210ENST00000567654 SPOPLQ6IQ16 392 aa6.17□□□□□ -1.42
SF3B3-210ENST00000567654 RUFY4Q6ZNE9 571 aa6.17□□□□□ -1.42
SF3B3-210ENST00000567654 ZNF662Q6ZS27 426 aa6.17□□□□□ -1.42
SF3B3-210ENST00000567654 GK5Q6ZS86 529 aa6.17□□□□□ -1.42
SF3B3-210ENST00000567654 ZNF765Q7L2R6 523 aa6.17□□□□□ -1.42
SF3B3-210ENST00000567654 KIAA1328Q86T90 577 aa6.17□□□□□ -1.42
SF3B3-210ENST00000567654 TOP6BLQ8N6T0 577 aa6.17□□□□□ -1.42
SF3B3-210ENST00000567654 OR5B17Q8NGF7 314 aa6.17□□□□□ -1.42
SF3B3-210ENST00000567654 KIF18AQ8NI77 898 aa6.17□□□□□ -1.42
SF3B3-210ENST00000567654 SLC20A1Q8WUM9 679 aa6.17□□□□□ -1.42
SF3B3-210ENST00000567654 LMBR1Q8WVP7 490 aa6.17□□□□□ -1.42
SF3B3-210ENST00000567654 DHX38Q92620 1227 aaKnown RBP6.17□□□□□ -1.42
SF3B3-210ENST00000567654 NKD1Q969G9 470 aa6.17□□□□□ -1.42
SF3B3-210ENST00000567654 ACSF2Q96CM8 615 aaPredicted RBP6.17□□□□□ -1.42
SF3B3-210ENST00000567654 CPB2Q96IY4 423 aa6.17□□□□□ -1.42
SF3B3-210ENST00000567654 CCDC42Q96M95 316 aa6.17□□□□□ -1.42
SF3B3-210ENST00000567654 SPAG5Q96R06 1193 aa6.17□□□□□ -1.42
SF3B3-210ENST00000567654 MSTO1Q9BUK6 570 aa6.17□□□□□ -1.42
SF3B3-210ENST00000567654 STK33Q9BYT3 514 aa6.17□□□□□ -1.42
SF3B3-210ENST00000567654 CXCL16Q9H2A7 254 aa6.17□□□□□ -1.42
SF3B3-210ENST00000567654 FZD8Q9H461 694 aa6.17□□□□□ -1.42
SF3B3-210ENST00000567654 L2HGDHQ9H9P8 463 aa6.17□□□□□ -1.42
SF3B3-210ENST00000567654 TMEM8AQ9HCN3 771 aa6.17□□□□□ -1.42
SF3B3-210ENST00000567654 PTPRHQ9HD43 1115 aa6.17□□□□□ -1.42
SF3B3-210ENST00000567654 SETD4Q9NVD3 440 aa6.17□□□□□ -1.42
SF3B3-210ENST00000567654 RBAKQ9NYW8 714 aaPredicted RBP6.17□□□□□ -1.42
SF3B3-210ENST00000567654 NOL12Q9UGY1 213 aaKnown RBP eCLIP6.17□□□□□ -1.42
SF3B3-210ENST00000567654 GUCA1BQ9UMX6 200 aa6.17□□□□□ -1.42
SF3B3-210ENST00000567654 COQ4Q9Y3A0 265 aa6.17□□□□□ -1.42
SF3B3-210ENST00000567654 PCDHB14Q9Y5E9 798 aa6.17□□□□□ -1.42
SF3B3-210ENST00000567654 V9GYY5 206 aaPredicted RBP6.17□□□□□ -1.42
SF3B3-210ENST00000567654 UMODL1Q5DID0 1318 aa6.17□□□□□ -1.42
SF3B3-210ENST00000567654 TANC1Q9C0D5 1861 aa6.17□□□□□ -1.42
SF3B3-210ENST00000567654 PTPRDP23468 1912 aa6.17□□□□□ -1.42
SF3B3-210ENST00000567654 MACROD2A1Z1Q3 448 aa6.16□□□□□ -1.42
SF3B3-210ENST00000567654 ZNF233A6NK53 670 aa6.16□□□□□ -1.42
SF3B3-210ENST00000567654 INO80B-WBP1J3KQ70 363 aa6.16□□□□□ -1.42
SF3B3-210ENST00000567654 ACKR2O00590 384 aa6.16□□□□□ -1.42
SF3B3-210ENST00000567654 PMM2O15305 246 aa6.16□□□□□ -1.42
SF3B3-210ENST00000567654 P4HA2O15460 535 aa6.16□□□□□ -1.42
SF3B3-210ENST00000567654 CTIFO43310 598 aaKnown RBP6.16□□□□□ -1.42
SF3B3-210ENST00000567654 N4BP1O75113 896 aaKnown RBP6.16□□□□□ -1.42
SF3B3-210ENST00000567654 URI1O94763 535 aaPredicted RBP6.16□□□□□ -1.42
SF3B3-210ENST00000567654 MOCS3O95396 460 aa6.16□□□□□ -1.42
SF3B3-210ENST00000567654 HLA-DRAP01903 254 aa6.16□□□□□ -1.42
SF3B3-210ENST00000567654 ATP1A1P05023 1023 aaKnown RBP6.16□□□□□ -1.42
SF3B3-210ENST00000567654 MYL3P08590 195 aa6.16□□□□□ -1.42
SF3B3-210ENST00000567654 SMIM10L2AP0DMW4 78 aa6.16□□□□□ -1.42
SF3B3-210ENST00000567654 SMIM10L2BP0DMW5 78 aa6.16□□□□□ -1.42
SF3B3-210ENST00000567654 CYBAP13498 195 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms