RNA–Protein interactions for RNA: ENST00000565634.5

UBFD1-204, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 2

Gene UBFD1, Length 724 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-204ENST00000565634 SHDQ96IW2 340 aa6.73□□□□□ -1.33
UBFD1-204ENST00000565634 B3GALT6Q96L58 329 aa6.73□□□□□ -1.33
UBFD1-204ENST00000565634 FIZ1Q96SL8 496 aa6.73□□□□□ -1.33
UBFD1-204ENST00000565634 REEP2Q9BRK0 252 aa6.73□□□□□ -1.33
UBFD1-204ENST00000565634 DDX23Q9BUQ8 820 aaKnown RBP6.73□□□□□ -1.33
UBFD1-204ENST00000565634 KIFC3Q9BVG8 833 aa6.73□□□□□ -1.33
UBFD1-204ENST00000565634 ADAMTS10Q9H324 1103 aa6.73□□□□□ -1.33
UBFD1-204ENST00000565634 DHX33Q9H6R0 707 aaKnown RBP6.73□□□□□ -1.33
UBFD1-204ENST00000565634 NRDE2Q9H7Z3 1164 aa6.73□□□□□ -1.33
UBFD1-204ENST00000565634 MINDY3Q9H8M7 445 aa6.73□□□□□ -1.33
UBFD1-204ENST00000565634 SLC2A4RGQ9NR83 387 aa6.73□□□□□ -1.33
UBFD1-204ENST00000565634 METTL5Q9NRN9 209 aaKnown RBP6.73□□□□□ -1.33
UBFD1-204ENST00000565634 TMEM63CQ9P1W3 806 aa6.73□□□□□ -1.33
UBFD1-204ENST00000565634 RNF112Q9ULX5 631 aa6.73□□□□□ -1.33
UBFD1-204ENST00000565634 WASF3Q9UPY6 502 aa6.73□□□□□ -1.33
UBFD1-204ENST00000565634 INPP5FQ9Y2H2 1132 aa6.73□□□□□ -1.33
UBFD1-204ENST00000565634 PCDHA2Q9Y5H9 948 aa6.73□□□□□ -1.33
UBFD1-204ENST00000565634 KCNMB2Q9Y691 235 aa6.73□□□□□ -1.33
UBFD1-204ENST00000565634 TDRD15B5MCY1 1934 aaKnown RBP6.73□□□□□ -1.33
UBFD1-204ENST00000565634 MYO18BQ8IUG5 2567 aa6.72□□□□□ -1.33
UBFD1-204ENST00000565634 EIF4E1BA6NMX2 242 aaKnown RBP6.72□□□□□ -1.33
UBFD1-204ENST00000565634 C4orf47A7E2U8 309 aa6.72□□□□□ -1.33
UBFD1-204ENST00000565634 ANHXE9PGG2 379 aa6.72□□□□□ -1.33
UBFD1-204ENST00000565634 BIN1O00499 593 aa6.72□□□□□ -1.33
UBFD1-204ENST00000565634 MMP20O60882 483 aa6.72□□□□□ -1.33
UBFD1-204ENST00000565634 GPR32O75388 356 aa6.72□□□□□ -1.33
UBFD1-204ENST00000565634 GALTP07902 379 aa6.72□□□□□ -1.33
UBFD1-204ENST00000565634 SRGAP2CP0DJJ0 459 aa6.72□□□□□ -1.33
UBFD1-204ENST00000565634 GLRA2P23416 452 aa6.72□□□□□ -1.33
UBFD1-204ENST00000565634 GNA15P30679 374 aa6.72□□□□□ -1.33
UBFD1-204ENST00000565634 PPM1AP35813 382 aa6.72□□□□□ -1.33
UBFD1-204ENST00000565634 SLC11A1P49279 550 aa6.72□□□□□ -1.33
UBFD1-204ENST00000565634 CASP5P51878 434 aa6.72□□□□□ -1.33
UBFD1-204ENST00000565634 FAM160A1Q05DH4 1040 aa6.72□□□□□ -1.33
UBFD1-204ENST00000565634 LAMTOR4Q0VGL1 99 aa6.72□□□□□ -1.33
UBFD1-204ENST00000565634 BMS1Q14692 1282 aaKnown RBP6.72□□□□□ -1.33
UBFD1-204ENST00000565634 ZC2HC1CQ53FD0 456 aaPredicted RBP6.72□□□□□ -1.33
UBFD1-204ENST00000565634 CEP68Q76N32 757 aa6.72□□□□□ -1.33
UBFD1-204ENST00000565634 SV2BQ7L1I2 683 aa6.72□□□□□ -1.33
UBFD1-204ENST00000565634 GRASPQ7Z6J2 395 aaPredicted RBP6.72□□□□□ -1.33
UBFD1-204ENST00000565634 DDX53Q86TM3 631 aaKnown RBP6.72□□□□□ -1.33
UBFD1-204ENST00000565634 ZNF280BQ86YH2 543 aa6.72□□□□□ -1.33
UBFD1-204ENST00000565634 TREML1Q86YW5 311 aa6.72□□□□□ -1.33
UBFD1-204ENST00000565634 SMYD4Q8IYR2 804 aaPredicted RBP6.72□□□□□ -1.33
UBFD1-204ENST00000565634 LRRC43Q8N309 656 aa6.72□□□□□ -1.33
UBFD1-204ENST00000565634 TMEM130Q8N3G9 435 aa6.72□□□□□ -1.33
UBFD1-204ENST00000565634 C12orf50Q8NA57 414 aaPredicted RBP6.72□□□□□ -1.33
UBFD1-204ENST00000565634 ZSWIM2Q8NEG5 633 aa6.72□□□□□ -1.33
UBFD1-204ENST00000565634 ERMNQ8TAM6 284 aa6.72□□□□□ -1.33
UBFD1-204ENST00000565634 DDX1Q92499 740 aaKnown RBP6.72□□□□□ -1.33
UBFD1-204ENST00000565634 LARP4BQ92615 738 aaKnown RBP6.72□□□□□ -1.33
UBFD1-204ENST00000565634 PLD4Q96BZ4 506 aa6.72□□□□□ -1.33
UBFD1-204ENST00000565634 CRELD1Q96HD1 420 aa6.72□□□□□ -1.33
UBFD1-204ENST00000565634 IGSF21Q96ID5 467 aa6.72□□□□□ -1.33
UBFD1-204ENST00000565634 LRIG1Q96JA1 1093 aa6.72□□□□□ -1.33
UBFD1-204ENST00000565634 MED15Q96RN5 788 aa6.72□□□□□ -1.33
UBFD1-204ENST00000565634 C7orf25Q9BPX7 421 aa6.72□□□□□ -1.33
UBFD1-204ENST00000565634 LMAN1LQ9HAT1 526 aa6.72□□□□□ -1.33
UBFD1-204ENST00000565634 C1orf112Q9NSG2 853 aa6.72□□□□□ -1.33
UBFD1-204ENST00000565634 FAM13BQ9NYF5 915 aa6.72□□□□□ -1.33
UBFD1-204ENST00000565634 SUCLA2Q9P2R7 463 aaPredicted RBP6.72□□□□□ -1.33
UBFD1-204ENST00000565634 CCDC39Q9UFE4 941 aa6.72□□□□□ -1.33
UBFD1-204ENST00000565634 TCEAL9Q9UHQ7 104 aa6.72□□□□□ -1.33
UBFD1-204ENST00000565634 KLK13Q9UKR3 277 aa6.72□□□□□ -1.33
UBFD1-204ENST00000565634 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.72□□□□□ -1.33
UBFD1-204ENST00000565634 PCDHA5Q9Y5H7 936 aa6.72□□□□□ -1.33
UBFD1-204ENST00000565634 SQORQ9Y6N5 450 aa6.72□□□□□ -1.33
UBFD1-204ENST00000565634 A0A087WZ62 844 aa6.71□□□□□ -1.34
UBFD1-204ENST00000565634 ARHGEF35A5YM69 484 aa6.71□□□□□ -1.34
UBFD1-204ENST00000565634 GOLGA6L4A6NEF3 574 aa6.71□□□□□ -1.34
UBFD1-204ENST00000565634 RRN3P2A6NIE6 340 aa6.71□□□□□ -1.34
UBFD1-204ENST00000565634 TISP43B9A030 160 aa6.71□□□□□ -1.34
UBFD1-204ENST00000565634 RPL17P18621 184 aaKnown RBP6.71□□□□□ -1.34
UBFD1-204ENST00000565634 MZF1P28698 734 aaPredicted RBP6.71□□□□□ -1.34
UBFD1-204ENST00000565634 DNAJA1P31689 397 aaKnown RBP6.71□□□□□ -1.34
UBFD1-204ENST00000565634 NLRP11P59045 1033 aaKnown RBP6.71□□□□□ -1.34
UBFD1-204ENST00000565634 STK4Q13043 487 aa6.71□□□□□ -1.34
UBFD1-204ENST00000565634 EMC2Q15006 297 aa6.71□□□□□ -1.34
UBFD1-204ENST00000565634 RNF43Q68DV7 783 aa6.71□□□□□ -1.34
UBFD1-204ENST00000565634 SCARA3Q6AZY7 606 aa6.71□□□□□ -1.34
UBFD1-204ENST00000565634 CCDC73Q6ZRK6 1079 aa6.71□□□□□ -1.34
UBFD1-204ENST00000565634 ZNF662Q6ZS27 426 aa6.71□□□□□ -1.34
UBFD1-204ENST00000565634 OTUD6AQ7L8S5 288 aa6.71□□□□□ -1.34
UBFD1-204ENST00000565634 CDR2LQ86X02 465 aaPredicted RBP6.71□□□□□ -1.34
UBFD1-204ENST00000565634 RHPN2Q8IUC4 686 aa6.71□□□□□ -1.34
UBFD1-204ENST00000565634 IL22RA1Q8N6P7 574 aa6.71□□□□□ -1.34
UBFD1-204ENST00000565634 IQUBQ8NA54 791 aa6.71□□□□□ -1.34
UBFD1-204ENST00000565634 CNNM3Q8NE01 707 aa6.71□□□□□ -1.34
UBFD1-204ENST00000565634 RASSF8Q8NHQ8 419 aa6.71□□□□□ -1.34
UBFD1-204ENST00000565634 ITFG1Q8TB96 612 aa6.71□□□□□ -1.34
UBFD1-204ENST00000565634 ING5Q8WYH8 240 aa6.71□□□□□ -1.34
UBFD1-204ENST00000565634 CLDN23Q96B33 292 aa6.71□□□□□ -1.34
UBFD1-204ENST00000565634 CDK5RAP3Q96JB5 506 aa6.71□□□□□ -1.34
UBFD1-204ENST00000565634 ZBTB45Q96K62 511 aaPredicted RBP6.71□□□□□ -1.34
UBFD1-204ENST00000565634 GBP4Q96PP9 640 aa6.71□□□□□ -1.34
UBFD1-204ENST00000565634 HNRNPABQ99729 332 aaKnown RBP6.71□□□□□ -1.34
UBFD1-204ENST00000565634 FDXACB1Q9BRP7 624 aaPredicted RBP6.71□□□□□ -1.34
UBFD1-204ENST00000565634 RAB34Q9BZG1 259 aa6.71□□□□□ -1.34
UBFD1-204ENST00000565634 TRIM9Q9C026 710 aa6.71□□□□□ -1.34
UBFD1-204ENST00000565634 HAPLN2Q9GZV7 340 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms