RNA–Protein interactions for RNA: ENST00000564676.5

CDH1-206, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-206ENST00000564676 TPD52L1Q16890 204 aaPredicted RBP10.58□□□□□ -0.72
CDH1-206ENST00000564676 FAM78AQ5JUQ0 283 aa10.58□□□□□ -0.72
CDH1-206ENST00000564676 GPR158Q5T848 1215 aa10.58□□□□□ -0.72
CDH1-206ENST00000564676 GAREM2Q75VX8 874 aa10.58□□□□□ -0.72
CDH1-206ENST00000564676 UNC93AQ86WB7 457 aa10.58□□□□□ -0.72
CDH1-206ENST00000564676 STKLD1Q8NE28 680 aa10.58□□□□□ -0.72
CDH1-206ENST00000564676 ZSCAN18Q8TBC5 510 aaPredicted RBP10.58□□□□□ -0.72
CDH1-206ENST00000564676 GPT2Q8TD30 523 aa10.58□□□□□ -0.72
CDH1-206ENST00000564676 SMARCD2Q92925 531 aa10.58□□□□□ -0.72
CDH1-206ENST00000564676 TATDN2Q93075 761 aa10.58□□□□□ -0.72
CDH1-206ENST00000564676 SLC35C1Q96A29 364 aa10.58□□□□□ -0.72
CDH1-206ENST00000564676 PBXIP1Q96AQ6 731 aa10.58□□□□□ -0.72
CDH1-206ENST00000564676 ZSWIM3Q96MP5 696 aa10.58□□□□□ -0.72
CDH1-206ENST00000564676 B3GNT5Q9BYG0 378 aa10.58□□□□□ -0.72
CDH1-206ENST00000564676 BCO2Q9BYV7 579 aa10.58□□□□□ -0.72
CDH1-206ENST00000564676 ZNF518BQ9C0D4 1074 aa10.58□□□□□ -0.72
CDH1-206ENST00000564676 ELOVL4Q9GZR5 314 aa10.58□□□□□ -0.72
CDH1-206ENST00000564676 UXTQ9UBK9 157 aaPredicted RBP10.58□□□□□ -0.72
CDH1-206ENST00000564676 DACH1Q9UI36 760 aa10.58□□□□□ -0.72
CDH1-206ENST00000564676 F8VP50 259 aa10.57□□□□□ -0.72
CDH1-206ENST00000564676 ECI2O75521 394 aa10.57□□□□□ -0.72
CDH1-206ENST00000564676 NOL4O94818 638 aa10.57□□□□□ -0.72
CDH1-206ENST00000564676 MBD3O95983 291 aa10.57□□□□□ -0.72
CDH1-206ENST00000564676 CFHP08603 1231 aa10.57□□□□□ -0.72
CDH1-206ENST00000564676 SRFP11831 508 aa10.57□□□□□ -0.72
CDH1-206ENST00000564676 HMGA1P17096 107 aaKnown RBP10.57□□□□□ -0.72
CDH1-206ENST00000564676 FMO5P49326 533 aa10.57□□□□□ -0.72
CDH1-206ENST00000564676 CYP4F8P98187 520 aa10.57□□□□□ -0.72
CDH1-206ENST00000564676 LRMPQ12912 555 aa10.57□□□□□ -0.72
CDH1-206ENST00000564676 TANGO2Q6ICL3 276 aa10.57□□□□□ -0.72
CDH1-206ENST00000564676 HFE2Q6ZVN8 426 aa10.57□□□□□ -0.72
CDH1-206ENST00000564676 GPIHBP1Q8IV16 184 aa10.57□□□□□ -0.72
CDH1-206ENST00000564676 CRYBG2Q8N1P7 616 aa10.57□□□□□ -0.72
CDH1-206ENST00000564676 ELSPBP1Q96BH3 223 aa10.57□□□□□ -0.72
CDH1-206ENST00000564676 ASIC4Q96FT7 647 aa10.57□□□□□ -0.72
CDH1-206ENST00000564676 ASB16Q96NS5 453 aa10.57□□□□□ -0.72
CDH1-206ENST00000564676 NT5C1AQ9BXI3 368 aa10.57□□□□□ -0.72
CDH1-206ENST00000564676 TASP1Q9H6P5 420 aa10.57□□□□□ -0.72
CDH1-206ENST00000564676 IL21Q9HBE4 155 aa10.57□□□□□ -0.72
CDH1-206ENST00000564676 HMGXB4Q9UGU5 601 aa10.57□□□□□ -0.72
CDH1-206ENST00000564676 COQ4Q9Y3A0 265 aa10.57□□□□□ -0.72
CDH1-206ENST00000564676 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.57□□□□□ -0.72
CDH1-206ENST00000564676 MYH10P35580 1976 aa10.57□□□□□ -0.72
CDH1-206ENST00000564676 MUC3AQ02505 3323 aa10.56□□□□□ -0.72
CDH1-206ENST00000564676 DPYSL4O14531 572 aa10.56□□□□□ -0.72
CDH1-206ENST00000564676 F11P03951 625 aa10.56□□□□□ -0.72
CDH1-206ENST00000564676 CCDC130P13994 396 aa10.56□□□□□ -0.72
CDH1-206ENST00000564676 RFX1P22670 979 aa10.56□□□□□ -0.72
CDH1-206ENST00000564676 VIPR2P41587 438 aa10.56□□□□□ -0.72
CDH1-206ENST00000564676 PSEN1P49768 467 aa10.56□□□□□ -0.72
CDH1-206ENST00000564676 GPC5P78333 572 aa10.56□□□□□ -0.72
CDH1-206ENST00000564676 INCA1Q0VD86 236 aa10.56□□□□□ -0.72
CDH1-206ENST00000564676 KCNH2Q12809 1159 aa10.56□□□□□ -0.72
CDH1-206ENST00000564676 DPCR1Q3MIW9 517 aa10.56□□□□□ -0.72
CDH1-206ENST00000564676 ZNF394Q53GI3 561 aa10.56□□□□□ -0.72
CDH1-206ENST00000564676 STXBP5Q5T5C0 1151 aa10.56□□□□□ -0.72
CDH1-206ENST00000564676 DENND5BQ6ZUT9 1274 aa10.56□□□□□ -0.72
CDH1-206ENST00000564676 BMP8AQ7Z5Y6 402 aa10.56□□□□□ -0.72
CDH1-206ENST00000564676 FAM35AQ86V20 835 aa10.56□□□□□ -0.72
CDH1-206ENST00000564676 ARID3BQ8IVW6 561 aaPredicted RBP10.56□□□□□ -0.72
CDH1-206ENST00000564676 TRIM59Q8IWR1 403 aa10.56□□□□□ -0.72
CDH1-206ENST00000564676 SUGP1Q8IWZ8 645 aaKnown RBP10.56□□□□□ -0.72
CDH1-206ENST00000564676 TTC39CQ8N584 583 aa10.56□□□□□ -0.72
CDH1-206ENST00000564676 MRPS31Q92665 395 aaKnown RBP10.56□□□□□ -0.72
CDH1-206ENST00000564676 SMARCD1Q96GM5 515 aa10.56□□□□□ -0.72
CDH1-206ENST00000564676 FAXDC2Q96IV6 333 aa10.56□□□□□ -0.72
CDH1-206ENST00000564676 SPATA17Q96L03 361 aa10.56□□□□□ -0.72
CDH1-206ENST00000564676 C8orf48Q96LL4 319 aa10.56□□□□□ -0.72
CDH1-206ENST00000564676 CEP295NLQ96MC4 621 aa10.56□□□□□ -0.72
CDH1-206ENST00000564676 TWNKQ96RR1 684 aa10.56□□□□□ -0.72
CDH1-206ENST00000564676 PLA2G2FQ9BZM2 168 aa10.56□□□□□ -0.72
CDH1-206ENST00000564676 MFSD1Q9H3U5 465 aa10.56□□□□□ -0.72
CDH1-206ENST00000564676 FAM49BQ9NUQ9 324 aa10.56□□□□□ -0.72
CDH1-206ENST00000564676 EHD2Q9NZN4 543 aa10.56□□□□□ -0.72
CDH1-206ENST00000564676 WNT16Q9UBV4 365 aa10.56□□□□□ -0.72
CDH1-206ENST00000564676 ZMYM5Q9UJ78 669 aa10.56□□□□□ -0.72
CDH1-206ENST00000564676 PTPRDP23468 1912 aa10.55□□□□□ -0.72
CDH1-206ENST00000564676 HEPACAM2A8MVW5 462 aa10.55□□□□□ -0.72
CDH1-206ENST00000564676 STK25O00506 426 aa10.55□□□□□ -0.72
CDH1-206ENST00000564676 PMM2O15305 246 aa10.55□□□□□ -0.72
CDH1-206ENST00000564676 P4HA2O15460 535 aa10.55□□□□□ -0.72
CDH1-206ENST00000564676 CILPO75339 1184 aa10.55□□□□□ -0.72
CDH1-206ENST00000564676 AP1G2O75843 785 aa10.55□□□□□ -0.72
CDH1-206ENST00000564676 AFPP02771 609 aaKnown RBP10.55□□□□□ -0.72
CDH1-206ENST00000564676 DDX6P26196 483 aaKnown RBP eCLIP10.55□□□□□ -0.72
CDH1-206ENST00000564676 ERCC5P28715 1186 aaPredicted RBP10.55□□□□□ -0.72
CDH1-206ENST00000564676 ADORA2BP29275 332 aa10.55□□□□□ -0.72
CDH1-206ENST00000564676 MTIF2P46199 727 aaKnown RBP10.55□□□□□ -0.72
CDH1-206ENST00000564676 CACNA2D1P54289 1103 aa10.55□□□□□ -0.72
CDH1-206ENST00000564676 MARSP56192 900 aaKnown RBP10.55□□□□□ -0.72
CDH1-206ENST00000564676 YWHAEP62258 255 aaKnown RBP10.55□□□□□ -0.72
CDH1-206ENST00000564676 PFKPQ01813 784 aa10.55□□□□□ -0.72
CDH1-206ENST00000564676 IFRD2Q12894 506 aaPredicted RBP10.55□□□□□ -0.72
CDH1-206ENST00000564676 CUL2Q13617 745 aa10.55□□□□□ -0.72
CDH1-206ENST00000564676 GRM2Q14416 872 aa10.55□□□□□ -0.72
CDH1-206ENST00000564676 TXNDC8Q6A555 127 aa10.55□□□□□ -0.72
CDH1-206ENST00000564676 SASS6Q6UVJ0 657 aa10.55□□□□□ -0.72
CDH1-206ENST00000564676 YAF2Q8IY57 180 aa10.55□□□□□ -0.72
CDH1-206ENST00000564676 FUKQ8N0W3 1084 aa10.55□□□□□ -0.72
CDH1-206ENST00000564676 SIX5Q8N196 739 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms