RNA–Protein interactions for RNA: ENST00000563759.1

LINC01960-201, Transcript of long intergenic non-protein coding RNA 1960, humanhuman

BASIC

Gene LINC01960, Length 1,884 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01960-201ENST00000563759 FAM200BP0CF97 657 aa23.16■■□□□ 1.3
LINC01960-201ENST00000563759 NPR3P17342 541 aa23.16■■□□□ 1.3
LINC01960-201ENST00000563759 GABRB2P47870 512 aa23.16■■□□□ 1.3
LINC01960-201ENST00000563759 GSCP56915 257 aaPredicted RBP23.16■■□□□ 1.3
LINC01960-201ENST00000563759 TAP1Q03518 808 aa23.16■■□□□ 1.3
LINC01960-201ENST00000563759 ELAVL2Q12926 359 aaKnown RBP23.16■■□□□ 1.3
LINC01960-201ENST00000563759 TUBB2AQ13885 445 aa23.16■■□□□ 1.3
LINC01960-201ENST00000563759 FAM35AQ86V20 835 aa23.16■■□□□ 1.3
LINC01960-201ENST00000563759 STK32AQ8WU08 396 aa23.16■■□□□ 1.3
LINC01960-201ENST00000563759 ZNF689Q96CS4 500 aaPredicted RBP23.16■■□□□ 1.3
LINC01960-201ENST00000563759 TUBB2BQ9BVA1 445 aa23.16■■□□□ 1.3
LINC01960-201ENST00000563759 DUSP16Q9BY84 665 aa23.16■■□□□ 1.3
LINC01960-201ENST00000563759 B3GNT5Q9BYG0 378 aa23.16■■□□□ 1.3
LINC01960-201ENST00000563759 GPR62Q9BZJ7 368 aa23.16■■□□□ 1.3
LINC01960-201ENST00000563759 TRIM7Q9C029 511 aa23.16■■□□□ 1.3
LINC01960-201ENST00000563759 CDC23Q9UJX2 597 aa23.16■■□□□ 1.3
LINC01960-201ENST00000563759 PATJQ8NI35 1801 aa23.15■■□□□ 1.3
LINC01960-201ENST00000563759 FGBP02675 491 aa23.15■■□□□ 1.3
LINC01960-201ENST00000563759 BTG3Q14201 252 aaPredicted RBP23.15■■□□□ 1.3
LINC01960-201ENST00000563759 RPS6KA1Q15418 735 aa23.15■■□□□ 1.3
LINC01960-201ENST00000563759 MAPRE1Q15691 268 aaKnown RBP23.15■■□□□ 1.3
LINC01960-201ENST00000563759 ZNF365Q70YC5 407 aa23.15■■□□□ 1.3
LINC01960-201ENST00000563759 TMEM173Q86WV6 379 aaPredicted RBP23.15■■□□□ 1.3
LINC01960-201ENST00000563759 FEZF2Q8TBJ5 459 aa23.15■■□□□ 1.3
LINC01960-201ENST00000563759 MYLPFQ96A32 169 aa23.15■■□□□ 1.3
LINC01960-201ENST00000563759 YME1L1Q96TA2 773 aa23.15■■□□□ 1.3
LINC01960-201ENST00000563759 HTATIP2Q9BUP3 242 aa23.15■■□□□ 1.3
LINC01960-201ENST00000563759 CWH43Q9H720 699 aa23.15■■□□□ 1.3
LINC01960-201ENST00000563759 RC3H2Q9HBD1 1191 aaKnown RBP23.15■■□□□ 1.3
LINC01960-201ENST00000563759 ALG6Q9Y672 507 aa23.15■■□□□ 1.3
LINC01960-201ENST00000563759 TCRBV5S1A1TA0A578 114 aa23.15■■□□□ 1.3
LINC01960-201ENST00000563759 XPO1O14980 1071 aaKnown RBP23.15■■□□□ 1.3
LINC01960-201ENST00000563759 SRGAP2O75044 1071 aa23.15■■□□□ 1.3
LINC01960-201ENST00000563759 OAZ2O95190 189 aa23.15■■□□□ 1.3
LINC01960-201ENST00000563759 TCP1P17987 556 aaKnown RBP23.15■■□□□ 1.3
LINC01960-201ENST00000563759 ZNF268Q14587 947 aaPredicted RBP23.15■■□□□ 1.3
LINC01960-201ENST00000563759 VARS2Q5ST30 1063 aaKnown RBP23.15■■□□□ 1.3
LINC01960-201ENST00000563759 C16orf59Q7L2K0 433 aa23.15■■□□□ 1.3
LINC01960-201ENST00000563759 OSBPL9Q96SU4 736 aa23.15■■□□□ 1.3
LINC01960-201ENST00000563759 SLC4A5Q9BY07 1137 aa23.15■■□□□ 1.3
LINC01960-201ENST00000563759 ABCB6Q9NP58 842 aa23.15■■□□□ 1.3
LINC01960-201ENST00000563759 SPOPO43791 374 aa23.14■■□□□ 1.29
LINC01960-201ENST00000563759 SYN1P17600 705 aa23.14■■□□□ 1.29
LINC01960-201ENST00000563759 PLA2G4AP47712 749 aa23.14■■□□□ 1.29
LINC01960-201ENST00000563759 RPL7AP62424 266 aaKnown RBP23.14■■□□□ 1.29
LINC01960-201ENST00000563759 FAM102AQ5T9C2 384 aaPredicted RBP23.14■■□□□ 1.29
LINC01960-201ENST00000563759 OR6B2Q6IFH4 312 aa23.14■■□□□ 1.29
LINC01960-201ENST00000563759 PSRC1Q6PGN9 363 aaPredicted RBP23.14■■□□□ 1.29
LINC01960-201ENST00000563759 PAQR9Q6ZVX9 377 aa23.14■■□□□ 1.29
LINC01960-201ENST00000563759 CMTR2Q8IYT2 770 aaKnown RBP23.14■■□□□ 1.29
LINC01960-201ENST00000563759 SMARCD1Q96GM5 515 aa23.14■■□□□ 1.29
LINC01960-201ENST00000563759 TMEM209Q96SK2 561 aa23.14■■□□□ 1.29
LINC01960-201ENST00000563759 METTL5Q9NRN9 209 aaKnown RBP23.14■■□□□ 1.29
LINC01960-201ENST00000563759 AP1G2O75843 785 aa23.13■■□□□ 1.29
LINC01960-201ENST00000563759 KRT3P12035 628 aa23.13■■□□□ 1.29
LINC01960-201ENST00000563759 COMTP21964 271 aa23.13■■□□□ 1.29
LINC01960-201ENST00000563759 CXCR5P32302 372 aa23.13■■□□□ 1.29
LINC01960-201ENST00000563759 FAM171BQ6P995 826 aa23.13■■□□□ 1.29
LINC01960-201ENST00000563759 CLEC20AQ6ZU45 233 aa23.13■■□□□ 1.29
LINC01960-201ENST00000563759 FAM183BPQ6ZVS7 135 aa23.13■■□□□ 1.29
LINC01960-201ENST00000563759 BCL7CQ8WUZ0 217 aaPredicted RBP23.13■■□□□ 1.29
LINC01960-201ENST00000563759 CAPN15O75808 1086 aa23.13■■□□□ 1.29
LINC01960-201ENST00000563759 PRLRP16471 622 aa23.13■■□□□ 1.29
LINC01960-201ENST00000563759 PPP1R15BQ5SWA1 713 aa23.13■■□□□ 1.29
LINC01960-201ENST00000563759 ZNF280DQ6N043 979 aa23.13■■□□□ 1.29
LINC01960-201ENST00000563759 TMEM110Q86TL2 294 aa23.13■■□□□ 1.29
LINC01960-201ENST00000563759 MCRS1Q96EZ8 462 aa23.13■■□□□ 1.29
LINC01960-201ENST00000563759 CAPZA3Q96KX2 299 aa23.13■■□□□ 1.29
LINC01960-201ENST00000563759 B3GALT6Q96L58 329 aa23.13■■□□□ 1.29
LINC01960-201ENST00000563759 CYLDQ9NQC7 956 aa23.13■■□□□ 1.29
LINC01960-201ENST00000563759 TMEM191CA6NGB0 347 aa23.12■■□□□ 1.29
LINC01960-201ENST00000563759 SIGLEC16A6NMB1 481 aa23.12■■□□□ 1.29
LINC01960-201ENST00000563759 FGFR3P22607 806 aa23.12■■□□□ 1.29
LINC01960-201ENST00000563759 ACADSBP45954 432 aa23.12■■□□□ 1.29
LINC01960-201ENST00000563759 MAP3K7CLP57077 242 aa23.12■■□□□ 1.29
LINC01960-201ENST00000563759 CTXN3Q4LDR2 81 aa23.12■■□□□ 1.29
LINC01960-201ENST00000563759 PIGZQ86VD9 579 aa23.12■■□□□ 1.29
LINC01960-201ENST00000563759 GADD45GIP1Q8TAE8 222 aaPredicted RBP23.12■■□□□ 1.29
LINC01960-201ENST00000563759 HES6Q96HZ4 224 aa23.12■■□□□ 1.29
LINC01960-201ENST00000563759 HSFY1Q96LI6 401 aa23.12■■□□□ 1.29
LINC01960-201ENST00000563759 ZNF558Q96NG5 402 aa23.12■■□□□ 1.29
LINC01960-201ENST00000563759 PKMYT1Q99640 499 aa23.12■■□□□ 1.29
LINC01960-201ENST00000563759 IP6K2Q9UHH9 426 aa23.12■■□□□ 1.29
LINC01960-201ENST00000563759 LCMT1Q9UIC8 334 aa23.12■■□□□ 1.29
LINC01960-201ENST00000563759 BEST1O76090 585 aa23.11■■□□□ 1.29
LINC01960-201ENST00000563759 PROSCO94903 275 aa23.11■■□□□ 1.29
LINC01960-201ENST00000563759 LCP1P13796 627 aa23.11■■□□□ 1.29
LINC01960-201ENST00000563759 WHAMMP3Q1A5X7 153 aa23.11■■□□□ 1.29
LINC01960-201ENST00000563759 SLC39A12Q504Y0 691 aa23.11■■□□□ 1.29
LINC01960-201ENST00000563759 KCNT2Q6UVM3 1135 aa23.11■■□□□ 1.29
LINC01960-201ENST00000563759 C4orf50Q6ZRC1 276 aa23.11■■□□□ 1.29
LINC01960-201ENST00000563759 LRRTM3Q86VH5 581 aa23.11■■□□□ 1.29
LINC01960-201ENST00000563759 ZDHHC17Q8IUH5 632 aa23.11■■□□□ 1.29
LINC01960-201ENST00000563759 BUD13Q9BRD0 619 aaKnown RBP eCLIP23.11■■□□□ 1.29
LINC01960-201ENST00000563759 TMLHEQ9NVH6 421 aa23.11■■□□□ 1.29
LINC01960-201ENST00000563759 MYO16Q9Y6X6 1858 aa23.11■■□□□ 1.29
LINC01960-201ENST00000563759 MIF4GDA9UHW6 222 aaKnown RBP23.11■■□□□ 1.29
LINC01960-201ENST00000563759 KCNK3O14649 394 aa23.11■■□□□ 1.29
LINC01960-201ENST00000563759 ZNF185O15231 689 aa23.11■■□□□ 1.29
LINC01960-201ENST00000563759 OR4Q2P0C623 313 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms