RNA–Protein interactions for RNA: ENST00000563485.2

HMGB1P33-201, Transcript of high mobility group box 1 pseudogene 33, humanhuman

BASIC

Gene HMGB1P33, Length 527 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P33-201ENST00000563485 COL23A1Q86Y22 540 aaPredicted RBP4.19□□□□□ -1.74
HMGB1P33-201ENST00000563485 TPH2Q8IWU9 490 aa4.19□□□□□ -1.74
HMGB1P33-201ENST00000563485 JPH3Q8WXH2 748 aaPredicted RBP4.19□□□□□ -1.74
HMGB1P33-201ENST00000563485 ACO2Q99798 780 aaKnown RBP4.19□□□□□ -1.74
HMGB1P33-201ENST00000563485 TRIM54Q9BYV2 358 aa4.19□□□□□ -1.74
HMGB1P33-201ENST00000563485 NMRK2Q9NPI5 230 aa4.19□□□□□ -1.74
HMGB1P33-201ENST00000563485 PIH1D1Q9NWS0 290 aaKnown RBP4.19□□□□□ -1.74
HMGB1P33-201ENST00000563485 A0A087WWL8 130 aa4.18□□□□□ -1.74
HMGB1P33-201ENST00000563485 PRRT4C9JH25 899 aa4.18□□□□□ -1.74
HMGB1P33-201ENST00000563485 H3BML4 177 aa4.18□□□□□ -1.74
HMGB1P33-201ENST00000563485 TP73O15350 636 aa4.18□□□□□ -1.74
HMGB1P33-201ENST00000563485 AKAP10O43572 662 aa4.18□□□□□ -1.74
HMGB1P33-201ENST00000563485 THP07101 528 aa4.18□□□□□ -1.74
HMGB1P33-201ENST00000563485 PDGFRBP09619 1106 aa4.18□□□□□ -1.74
HMGB1P33-201ENST00000563485 NPSP0C0P6 89 aa4.18□□□□□ -1.74
HMGB1P33-201ENST00000563485 HSPA6P17066 643 aa4.18□□□□□ -1.74
HMGB1P33-201ENST00000563485 KELP23276 732 aa4.18□□□□□ -1.74
HMGB1P33-201ENST00000563485 CTGFP29279 349 aa4.18□□□□□ -1.74
HMGB1P33-201ENST00000563485 LRPAP1P30533 357 aa4.18□□□□□ -1.74
HMGB1P33-201ENST00000563485 RAB27AP51159 221 aa4.18□□□□□ -1.74
HMGB1P33-201ENST00000563485 TPTEP56180 551 aa4.18□□□□□ -1.74
HMGB1P33-201ENST00000563485 ANAPC15P60006 121 aa4.18□□□□□ -1.74
HMGB1P33-201ENST00000563485 KRT17Q04695 432 aa4.18□□□□□ -1.74
HMGB1P33-201ENST00000563485 KLF9Q13886 244 aaPredicted RBP4.18□□□□□ -1.74
HMGB1P33-201ENST00000563485 SUPT20HL1Q3ZLR7 823 aa4.18□□□□□ -1.74
HMGB1P33-201ENST00000563485 CEP78Q5JTW2 689 aa4.18□□□□□ -1.74
HMGB1P33-201ENST00000563485 PARS2Q7L3T8 475 aaKnown RBP4.18□□□□□ -1.74
HMGB1P33-201ENST00000563485 YTHDF3Q7Z739 585 aaKnown RBP4.18□□□□□ -1.74
HMGB1P33-201ENST00000563485 NEK8Q86SG6 692 aa4.18□□□□□ -1.74
HMGB1P33-201ENST00000563485 DAAM2Q86T65 1068 aa4.18□□□□□ -1.74
HMGB1P33-201ENST00000563485 SLC15A3Q8IY34 581 aa4.18□□□□□ -1.74
HMGB1P33-201ENST00000563485 SLC15A4Q8N697 577 aa4.18□□□□□ -1.74
HMGB1P33-201ENST00000563485 DNAJC5GQ8N7S2 189 aa4.18□□□□□ -1.74
HMGB1P33-201ENST00000563485 RP9Q8TA86 221 aaKnown RBP4.18□□□□□ -1.74
HMGB1P33-201ENST00000563485 CYP2W1Q8TAV3 490 aa4.18□□□□□ -1.74
HMGB1P33-201ENST00000563485 SOCS4Q8WXH5 440 aa4.18□□□□□ -1.74
HMGB1P33-201ENST00000563485 AIFM3Q96NN9 605 aa4.18□□□□□ -1.74
HMGB1P33-201ENST00000563485 PUS7Q96PZ0 661 aaKnown RBP4.18□□□□□ -1.74
HMGB1P33-201ENST00000563485 TAAR9Q96RI9 348 aa4.18□□□□□ -1.74
HMGB1P33-201ENST00000563485 MESP1Q9BRJ9 268 aa4.18□□□□□ -1.74
HMGB1P33-201ENST00000563485 QTRT1Q9BXR0 403 aaKnown RBP4.18□□□□□ -1.74
HMGB1P33-201ENST00000563485 SEMA4CQ9C0C4 833 aa4.18□□□□□ -1.74
HMGB1P33-201ENST00000563485 ZMAT3Q9HA38 289 aaKnown RBP4.18□□□□□ -1.74
HMGB1P33-201ENST00000563485 DDX56Q9NY93 547 aaKnown RBP4.18□□□□□ -1.74
HMGB1P33-201ENST00000563485 CCNL1Q9UK58 526 aaPredicted RBP4.18□□□□□ -1.74
HMGB1P33-201ENST00000563485 E2F8A0AVK6 867 aa4.17□□□□□ -1.74
HMGB1P33-201ENST00000563485 MYO1CO00159 1063 aa4.17□□□□□ -1.74
HMGB1P33-201ENST00000563485 MYO1FO00160 1098 aa4.17□□□□□ -1.74
HMGB1P33-201ENST00000563485 PPP6CO00743 305 aa4.17□□□□□ -1.74
HMGB1P33-201ENST00000563485 PDE8BO95263 885 aa4.17□□□□□ -1.74
HMGB1P33-201ENST00000563485 VNN1O95497 513 aa4.17□□□□□ -1.74
HMGB1P33-201ENST00000563485 MYBP10242 640 aa4.17□□□□□ -1.74
HMGB1P33-201ENST00000563485 KITP10721 976 aa4.17□□□□□ -1.74
HMGB1P33-201ENST00000563485 CYP2C9P11712 490 aa4.17□□□□□ -1.74
HMGB1P33-201ENST00000563485 CERS1P27544 350 aa4.17□□□□□ -1.74
HMGB1P33-201ENST00000563485 ARFIP2P53365 341 aa4.17□□□□□ -1.74
HMGB1P33-201ENST00000563485 WNT3P56703 355 aa4.17□□□□□ -1.74
HMGB1P33-201ENST00000563485 HOXA4Q00056 320 aaPredicted RBP4.17□□□□□ -1.74
HMGB1P33-201ENST00000563485 SATB1Q01826 763 aa4.17□□□□□ -1.74
HMGB1P33-201ENST00000563485 CTBP1Q13363 440 aa4.17□□□□□ -1.74
HMGB1P33-201ENST00000563485 LY6KQ17RY6 165 aa4.17□□□□□ -1.74
HMGB1P33-201ENST00000563485 TRIM72Q6ZMU5 477 aa4.17□□□□□ -1.74
HMGB1P33-201ENST00000563485 CHSY1Q86X52 802 aa4.17□□□□□ -1.74
HMGB1P33-201ENST00000563485 PNLDC1Q8NA58 520 aaKnown RBP4.17□□□□□ -1.74
HMGB1P33-201ENST00000563485 ZBTB34Q8NCN2 500 aa4.17□□□□□ -1.74
HMGB1P33-201ENST00000563485 OSCP1Q8WVF1 389 aa4.17□□□□□ -1.74
HMGB1P33-201ENST00000563485 KBTBD7Q8WVZ9 684 aa4.17□□□□□ -1.74
HMGB1P33-201ENST00000563485 ANLNQ9NQW6 1124 aa4.17□□□□□ -1.74
HMGB1P33-201ENST00000563485 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.17□□□□□ -1.74
HMGB1P33-201ENST00000563485 SNX14Q9Y5W7 946 aa4.17□□□□□ -1.74
HMGB1P33-201ENST00000563485 A0A1W2PPL8 197 aa4.16□□□□□ -1.74
HMGB1P33-201ENST00000563485 TMEM233B4DJY2 109 aa4.16□□□□□ -1.74
HMGB1P33-201ENST00000563485 BTN3A1O00481 513 aa4.16□□□□□ -1.74
HMGB1P33-201ENST00000563485 ADAMTS3O15072 1205 aa4.16□□□□□ -1.74
HMGB1P33-201ENST00000563485 TJP3O95049 919 aa4.16□□□□□ -1.74
HMGB1P33-201ENST00000563485 KCNA3P22001 575 aa4.16□□□□□ -1.74
HMGB1P33-201ENST00000563485 DGKEP52429 567 aa4.16□□□□□ -1.74
HMGB1P33-201ENST00000563485 GPSM2P81274 684 aa4.16□□□□□ -1.74
HMGB1P33-201ENST00000563485 ETFDHQ16134 617 aa4.16□□□□□ -1.74
HMGB1P33-201ENST00000563485 CYP1B1Q16678 543 aa4.16□□□□□ -1.74
HMGB1P33-201ENST00000563485 MGAT5BQ3V5L5 792 aa4.16□□□□□ -1.74
HMGB1P33-201ENST00000563485 LMBRD2Q68DH5 695 aaPredicted RBP4.16□□□□□ -1.74
HMGB1P33-201ENST00000563485 FCRL6Q6DN72 434 aa4.16□□□□□ -1.74
HMGB1P33-201ENST00000563485 SLC18B1Q6NT16 456 aa4.16□□□□□ -1.74
HMGB1P33-201ENST00000563485 KIRREL2Q6UWL6 708 aa4.16□□□□□ -1.74
HMGB1P33-201ENST00000563485 ZNF783Q6ZMS7 281 aa4.16□□□□□ -1.74
HMGB1P33-201ENST00000563485 DPY19L3Q6ZPD9 716 aa4.16□□□□□ -1.74
HMGB1P33-201ENST00000563485 EPM2AIP1Q7L775 607 aaPredicted RBP4.16□□□□□ -1.74
HMGB1P33-201ENST00000563485 GAS2L3Q86XJ1 694 aa4.16□□□□□ -1.74
HMGB1P33-201ENST00000563485 ABRAQ8N0Z2 381 aa4.16□□□□□ -1.74
HMGB1P33-201ENST00000563485 ABHD11Q8NFV4 315 aa4.16□□□□□ -1.74
HMGB1P33-201ENST00000563485 SLC35G2Q8TBE7 412 aa4.16□□□□□ -1.74
HMGB1P33-201ENST00000563485 TMEM171Q8WVE6 324 aa4.16□□□□□ -1.74
HMGB1P33-201ENST00000563485 DAZAP1Q96EP5 407 aaKnown RBP4.16□□□□□ -1.74
HMGB1P33-201ENST00000563485 RITA1Q96K30 269 aa4.16□□□□□ -1.74
HMGB1P33-201ENST00000563485 LENG8Q96PV6 779 aaPredicted RBP4.16□□□□□ -1.74
HMGB1P33-201ENST00000563485 THAP7Q9BT49 309 aaPredicted RBP4.16□□□□□ -1.74
HMGB1P33-201ENST00000563485 CDH19Q9H159 772 aa4.16□□□□□ -1.74
HMGB1P33-201ENST00000563485 NRIP3Q9NQ35 241 aa4.16□□□□□ -1.74
HMGB1P33-201ENST00000563485 GABRQQ9UN88 632 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms