RNA–Protein interactions for RNA: ENST00000562039.1

NSMCE1-203, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 3

Gene NSMCE1, Length 260 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-203ENST00000562039 AVPR1AP37288 418 aa10.1□□□□□ -0.79
NSMCE1-203ENST00000562039 PMS1P54277 932 aaKnown RBP10.1□□□□□ -0.79
NSMCE1-203ENST00000562039 FAM160A1Q05DH4 1040 aa10.1□□□□□ -0.79
NSMCE1-203ENST00000562039 SMARCB1Q12824 385 aa10.1□□□□□ -0.79
NSMCE1-203ENST00000562039 TXNDC11Q6PKC3 985 aa10.1□□□□□ -0.79
NSMCE1-203ENST00000562039 CMTM8Q8IZV2 173 aa10.1□□□□□ -0.79
NSMCE1-203ENST00000562039 GUF1Q8N442 669 aaKnown RBP10.1□□□□□ -0.79
NSMCE1-203ENST00000562039 ARL14EPQ8N8R7 260 aaPredicted RBP10.1□□□□□ -0.79
NSMCE1-203ENST00000562039 B3GALNT2Q8NCR0 500 aa10.1□□□□□ -0.79
NSMCE1-203ENST00000562039 MYCBPAPQ8TBZ2 947 aa10.1□□□□□ -0.79
NSMCE1-203ENST00000562039 BPIFB1Q8TDL5 484 aa10.1□□□□□ -0.79
NSMCE1-203ENST00000562039 TAS1R2Q8TE23 839 aa10.1□□□□□ -0.79
NSMCE1-203ENST00000562039 DEPDC1BQ8WUY9 529 aa10.1□□□□□ -0.79
NSMCE1-203ENST00000562039 FAM3CQ92520 227 aa10.1□□□□□ -0.79
NSMCE1-203ENST00000562039 IRF7Q92985 503 aa10.1□□□□□ -0.79
NSMCE1-203ENST00000562039 USP13Q92995 863 aaPredicted RBP10.1□□□□□ -0.79
NSMCE1-203ENST00000562039 SMARCE1Q969G3 411 aa10.1□□□□□ -0.79
NSMCE1-203ENST00000562039 GKN1Q9NS71 199 aa10.1□□□□□ -0.79
NSMCE1-203ENST00000562039 FAM49BQ9NUQ9 324 aa10.1□□□□□ -0.79
NSMCE1-203ENST00000562039 DLGAP2Q9P1A6 1054 aa10.1□□□□□ -0.79
NSMCE1-203ENST00000562039 KIF26AQ9ULI4 1882 aaPredicted RBP10.1□□□□□ -0.79
NSMCE1-203ENST00000562039 OBSL1O75147 1896 aa10.09□□□□□ -0.79
NSMCE1-203ENST00000562039 CHADO15335 359 aa10.09□□□□□ -0.79
NSMCE1-203ENST00000562039 KIF20AO95235 890 aa10.09□□□□□ -0.79
NSMCE1-203ENST00000562039 FGF19O95750 216 aa10.09□□□□□ -0.79
NSMCE1-203ENST00000562039 CKMP06732 381 aa10.09□□□□□ -0.79
NSMCE1-203ENST00000562039 ADORA2BP29275 332 aa10.09□□□□□ -0.79
NSMCE1-203ENST00000562039 HOXC13P31276 330 aa10.09□□□□□ -0.79
NSMCE1-203ENST00000562039 ATICP31939 592 aa10.09□□□□□ -0.79
NSMCE1-203ENST00000562039 PSMC2P35998 433 aaKnown RBP10.09□□□□□ -0.79
NSMCE1-203ENST00000562039 NDST1P52848 882 aa10.09□□□□□ -0.79
NSMCE1-203ENST00000562039 PON2Q15165 354 aa10.09□□□□□ -0.79
NSMCE1-203ENST00000562039 SGSM1Q2NKQ1 1148 aa10.09□□□□□ -0.79
NSMCE1-203ENST00000562039 ZACNQ401N2 412 aa10.09□□□□□ -0.79
NSMCE1-203ENST00000562039 CFAP221Q4G0U5 840 aa10.09□□□□□ -0.79
NSMCE1-203ENST00000562039 ZNF394Q53GI3 561 aa10.09□□□□□ -0.79
NSMCE1-203ENST00000562039 DCAF17Q5H9S7 520 aaPredicted RBP10.09□□□□□ -0.79
NSMCE1-203ENST00000562039 NAIF1Q69YI7 327 aaPredicted RBP10.09□□□□□ -0.79
NSMCE1-203ENST00000562039 ANKRD40Q6AI12 368 aa10.09□□□□□ -0.79
NSMCE1-203ENST00000562039 KLHL10Q6JEL2 608 aa10.09□□□□□ -0.79
NSMCE1-203ENST00000562039 ZNF852Q6ZMS4 543 aa10.09□□□□□ -0.79
NSMCE1-203ENST00000562039 ASCL5Q7RTU5 278 aa10.09□□□□□ -0.79
NSMCE1-203ENST00000562039 CELF5Q8N6W0 485 aaKnown RBP10.09□□□□□ -0.79
NSMCE1-203ENST00000562039 TMC2Q8TDI7 906 aa10.09□□□□□ -0.79
NSMCE1-203ENST00000562039 SEMA4DQ92854 862 aa10.09□□□□□ -0.79
NSMCE1-203ENST00000562039 DNASE1L2Q92874 299 aa10.09□□□□□ -0.79
NSMCE1-203ENST00000562039 TWNKQ96RR1 684 aa10.09□□□□□ -0.79
NSMCE1-203ENST00000562039 KCNK16Q96T55 309 aa10.09□□□□□ -0.79
NSMCE1-203ENST00000562039 DDX23Q9BUQ8 820 aaKnown RBP10.09□□□□□ -0.79
NSMCE1-203ENST00000562039 EBF3Q9H4W6 596 aa10.09□□□□□ -0.79
NSMCE1-203ENST00000562039 LMAN1LQ9HAT1 526 aa10.09□□□□□ -0.79
NSMCE1-203ENST00000562039 TRPV4Q9HBA0 871 aa10.09□□□□□ -0.79
NSMCE1-203ENST00000562039 APOBEC3GQ9HC16 384 aaKnown RBP10.09□□□□□ -0.79
NSMCE1-203ENST00000562039 ABCB6Q9NP58 842 aa10.09□□□□□ -0.79
NSMCE1-203ENST00000562039 SMPD4Q9NXE4 827 aa10.09□□□□□ -0.79
NSMCE1-203ENST00000562039 MAN1B1Q9UKM7 699 aa10.09□□□□□ -0.79
NSMCE1-203ENST00000562039 WNT6Q9Y6F9 365 aa10.09□□□□□ -0.79
NSMCE1-203ENST00000562039 ATG2BQ96BY7 2078 aa10.09□□□□□ -0.79
NSMCE1-203ENST00000562039 PIEZO1Q92508 2521 aa10.09□□□□□ -0.79
NSMCE1-203ENST00000562039 ZFHX2Q9C0A1 2572 aaPredicted RBP10.09□□□□□ -0.79
NSMCE1-203ENST00000562039 DENND4CQ5VZ89 1909 aa10.08□□□□□ -0.8
NSMCE1-203ENST00000562039 TRAV19A0A0A6YYK7 116 aa10.08□□□□□ -0.8
NSMCE1-203ENST00000562039 ARNTLO00327 626 aa10.08□□□□□ -0.8
NSMCE1-203ENST00000562039 CETN3O15182 167 aa10.08□□□□□ -0.8
NSMCE1-203ENST00000562039 LAMTOR5O43504 91 aa10.08□□□□□ -0.8
NSMCE1-203ENST00000562039 GFRA3O60609 400 aa10.08□□□□□ -0.8
NSMCE1-203ENST00000562039 SMC2O95347 1197 aa10.08□□□□□ -0.8
NSMCE1-203ENST00000562039 SP9P0CG40 484 aa10.08□□□□□ -0.8
NSMCE1-203ENST00000562039 CD44P16070 742 aaKnown RBP10.08□□□□□ -0.8
NSMCE1-203ENST00000562039 RPL13P26373 211 aaKnown RBP10.08□□□□□ -0.8
NSMCE1-203ENST00000562039 MAGEA11P43364 429 aa10.08□□□□□ -0.8
NSMCE1-203ENST00000562039 ASPAP45381 313 aa10.08□□□□□ -0.8
NSMCE1-203ENST00000562039 AP3M2P53677 418 aa10.08□□□□□ -0.8
NSMCE1-203ENST00000562039 STX17P56962 302 aa10.08□□□□□ -0.8
NSMCE1-203ENST00000562039 CLDN10P78369 228 aa10.08□□□□□ -0.8
NSMCE1-203ENST00000562039 CSTF1Q05048 431 aaKnown RBP10.08□□□□□ -0.8
NSMCE1-203ENST00000562039 LRMPQ12912 555 aa10.08□□□□□ -0.8
NSMCE1-203ENST00000562039 MAPRE1Q15691 268 aaKnown RBP10.08□□□□□ -0.8
NSMCE1-203ENST00000562039 ZCWPW2Q504Y3 356 aa10.08□□□□□ -0.8
NSMCE1-203ENST00000562039 WDR44Q5JSH3 913 aa10.08□□□□□ -0.8
NSMCE1-203ENST00000562039 ZNF658Q5TYW1 1059 aaPredicted RBP10.08□□□□□ -0.8
NSMCE1-203ENST00000562039 TCERG1LQ5VWI1 586 aa10.08□□□□□ -0.8
NSMCE1-203ENST00000562039 DENND5BQ6ZUT9 1274 aa10.08□□□□□ -0.8
NSMCE1-203ENST00000562039 PAQR9Q6ZVX9 377 aa10.08□□□□□ -0.8
NSMCE1-203ENST00000562039 INTS8Q75QN2 995 aaKnown RBP10.08□□□□□ -0.8
NSMCE1-203ENST00000562039 FAM35AQ86V20 835 aa10.08□□□□□ -0.8
NSMCE1-203ENST00000562039 MON1AQ86VX9 555 aa10.08□□□□□ -0.8
NSMCE1-203ENST00000562039 C1orf210Q8IVY1 113 aa10.08□□□□□ -0.8
NSMCE1-203ENST00000562039 MAML2Q8IZL2 1156 aaPredicted RBP10.08□□□□□ -0.8
NSMCE1-203ENST00000562039 C12orf29Q8N999 325 aa10.08□□□□□ -0.8
NSMCE1-203ENST00000562039 SPATA18Q8TC71 538 aa10.08□□□□□ -0.8
NSMCE1-203ENST00000562039 CCDC34Q96HJ3 373 aa10.08□□□□□ -0.8
NSMCE1-203ENST00000562039 FUBP3Q96I24 572 aaKnown RBP eCLIP10.08□□□□□ -0.8
NSMCE1-203ENST00000562039 TSG101Q99816 390 aa10.08□□□□□ -0.8
NSMCE1-203ENST00000562039 KRT82Q9NSB4 513 aa10.08□□□□□ -0.8
NSMCE1-203ENST00000562039 RMND1Q9NWS8 449 aa10.08□□□□□ -0.8
NSMCE1-203ENST00000562039 UXTQ9UBK9 157 aaPredicted RBP10.08□□□□□ -0.8
NSMCE1-203ENST00000562039 NUP210Q8TEM1 1887 aaPredicted RBP10.08□□□□□ -0.8
NSMCE1-203ENST00000562039 MYH10P35580 1976 aa10.08□□□□□ -0.8
NSMCE1-203ENST00000562039 COL4A2P08572 1712 aa10.07□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms