RNA–Protein interactions for RNA: ENST00000561517.5

CCDC113-203, Transcript of coiled-coil domain containing 113, humanhuman

TSL 4

Gene CCDC113, Length 557 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-203ENST00000561517 IRF7Q92985 503 aa16.5■□□□□ 0.23
CCDC113-203ENST00000561517 SLC46A2Q9BY10 475 aa16.5■□□□□ 0.23
CCDC113-203ENST00000561517 BRD9Q9H8M2 597 aa16.5■□□□□ 0.23
CCDC113-203ENST00000561517 TMEM8AQ9HCN3 771 aa16.5■□□□□ 0.23
CCDC113-203ENST00000561517 MAGED2Q9UNF1 606 aaPredicted RBP16.5■□□□□ 0.23
CCDC113-203ENST00000561517 HELZP42694 1942 aaKnown RBP16.5■□□□□ 0.23
CCDC113-203ENST00000561517 KANSL1LA0AUZ9 987 aa16.49■□□□□ 0.23
CCDC113-203ENST00000561517 STK25O00506 426 aa16.49■□□□□ 0.23
CCDC113-203ENST00000561517 TRIM66O15016 1216 aa16.49■□□□□ 0.23
CCDC113-203ENST00000561517 SLC16A3O15427 465 aaKnown RBP16.49■□□□□ 0.23
CCDC113-203ENST00000561517 PRAMEF12O95522 483 aa16.49■□□□□ 0.23
CCDC113-203ENST00000561517 BMP6P22004 513 aa16.49■□□□□ 0.23
CCDC113-203ENST00000561517 RFX1P22670 979 aa16.49■□□□□ 0.23
CCDC113-203ENST00000561517 CCNE1P24864 410 aa16.49■□□□□ 0.23
CCDC113-203ENST00000561517 GDI1P31150 447 aa16.49■□□□□ 0.23
CCDC113-203ENST00000561517 GRIK1P39086 918 aa16.49■□□□□ 0.23
CCDC113-203ENST00000561517 PPP1R2P41236 205 aa16.49■□□□□ 0.23
CCDC113-203ENST00000561517 ASPAP45381 313 aa16.49■□□□□ 0.23
CCDC113-203ENST00000561517 UBE2HP62256 183 aa16.49■□□□□ 0.23
CCDC113-203ENST00000561517 STIM1Q13586 685 aa16.49■□□□□ 0.23
CCDC113-203ENST00000561517 KRT39Q6A163 491 aa16.49■□□□□ 0.23
CCDC113-203ENST00000561517 SPOPLQ6IQ16 392 aa16.49■□□□□ 0.23
CCDC113-203ENST00000561517 CCDC105Q8IYK2 499 aa16.49■□□□□ 0.23
CCDC113-203ENST00000561517 CMTM8Q8IZV2 173 aa16.49■□□□□ 0.23
CCDC113-203ENST00000561517 DHTKD1Q96HY7 919 aaPredicted RBP16.49■□□□□ 0.23
CCDC113-203ENST00000561517 TNIP3Q96KP6 325 aa16.49■□□□□ 0.23
CCDC113-203ENST00000561517 C8orf48Q96LL4 319 aa16.49■□□□□ 0.23
CCDC113-203ENST00000561517 LRRC3BQ96PB8 259 aa16.49■□□□□ 0.23
CCDC113-203ENST00000561517 B3GNT5Q9BYG0 378 aa16.49■□□□□ 0.23
CCDC113-203ENST00000561517 BCO2Q9BYV7 579 aa16.49■□□□□ 0.23
CCDC113-203ENST00000561517 IMPG2Q9BZV3 1241 aa16.49■□□□□ 0.23
CCDC113-203ENST00000561517 ELOVL4Q9GZR5 314 aa16.49■□□□□ 0.23
CCDC113-203ENST00000561517 TMEM30AQ9NV96 361 aa16.49■□□□□ 0.23
CCDC113-203ENST00000561517 DLGAP2Q9P1A6 1054 aa16.49■□□□□ 0.23
CCDC113-203ENST00000561517 TRIM49BA6NDI0 452 aa16.48■□□□□ 0.23
CCDC113-203ENST00000561517 SHISA7A6NL88 538 aa16.48■□□□□ 0.23
CCDC113-203ENST00000561517 ARNTLO00327 626 aa16.48■□□□□ 0.23
CCDC113-203ENST00000561517 DPYSL4O14531 572 aa16.48■□□□□ 0.23
CCDC113-203ENST00000561517 PSMA7O14818 248 aa16.48■□□□□ 0.23
CCDC113-203ENST00000561517 ZNF263O14978 683 aa16.48■□□□□ 0.23
CCDC113-203ENST00000561517 CHADO15335 359 aa16.48■□□□□ 0.23
CCDC113-203ENST00000561517 STX10O60499 249 aa16.48■□□□□ 0.23
CCDC113-203ENST00000561517 CLSTN1O94985 981 aa16.48■□□□□ 0.23
CCDC113-203ENST00000561517 CD44P16070 742 aaKnown RBP16.48■□□□□ 0.23
CCDC113-203ENST00000561517 NOP14P78316 857 aaKnown RBP16.48■□□□□ 0.23
CCDC113-203ENST00000561517 MORC3Q14149 939 aa16.48■□□□□ 0.23
CCDC113-203ENST00000561517 ISM2Q6H9L7 571 aa16.48■□□□□ 0.23
CCDC113-203ENST00000561517 FOXR2Q6PJQ5 311 aa16.48■□□□□ 0.23
CCDC113-203ENST00000561517 MON1AQ86VX9 555 aa16.48■□□□□ 0.23
CCDC113-203ENST00000561517 UNC93AQ86WB7 457 aa16.48■□□□□ 0.23
CCDC113-203ENST00000561517 GPIHBP1Q8IV16 184 aa16.48■□□□□ 0.23
CCDC113-203ENST00000561517 CRYBG2Q8N1P7 616 aa16.48■□□□□ 0.23
CCDC113-203ENST00000561517 PJA1Q8NG27 643 aa16.48■□□□□ 0.23
CCDC113-203ENST00000561517 MRPS31Q92665 395 aaKnown RBP16.48■□□□□ 0.23
CCDC113-203ENST00000561517 TTLL2Q9BWV7 592 aa16.48■□□□□ 0.23
CCDC113-203ENST00000561517 OSBPL6Q9BZF3 934 aa16.48■□□□□ 0.23
CCDC113-203ENST00000561517 FOXQ1Q9C009 403 aa16.48■□□□□ 0.23
CCDC113-203ENST00000561517 ZNF518BQ9C0D4 1074 aa16.48■□□□□ 0.23
CCDC113-203ENST00000561517 IRF2BPLQ9H1B7 796 aa16.48■□□□□ 0.23
CCDC113-203ENST00000561517 APOBEC3GQ9HC16 384 aaKnown RBP16.48■□□□□ 0.23
CCDC113-203ENST00000561517 HEBP1Q9NRV9 189 aa16.48■□□□□ 0.23
CCDC113-203ENST00000561517 SIT1Q9Y3P8 196 aa16.48■□□□□ 0.23
CCDC113-203ENST00000561517 PATJQ8NI35 1801 aa16.47■□□□□ 0.23
CCDC113-203ENST00000561517 PPP1R3GB7ZBB8 358 aa16.47■□□□□ 0.23
CCDC113-203ENST00000561517 F8VP50 259 aa16.47■□□□□ 0.23
CCDC113-203ENST00000561517 CLDN5O00501 218 aa16.47■□□□□ 0.23
CCDC113-203ENST00000561517 ANXA13P27216 316 aa16.47■□□□□ 0.23
CCDC113-203ENST00000561517 MXI1P50539 228 aa16.47■□□□□ 0.23
CCDC113-203ENST00000561517 NDST1P52848 882 aa16.47■□□□□ 0.23
CCDC113-203ENST00000561517 CACNA2D1P54289 1103 aa16.47■□□□□ 0.23
CCDC113-203ENST00000561517 INCA1Q0VD86 236 aa16.47■□□□□ 0.23
CCDC113-203ENST00000561517 TXNDC8Q6A555 127 aa16.47■□□□□ 0.23
CCDC113-203ENST00000561517 TPRG1Q6ZUI0 275 aa16.47■□□□□ 0.23
CCDC113-203ENST00000561517 DENND5BQ6ZUT9 1274 aa16.47■□□□□ 0.23
CCDC113-203ENST00000561517 PAQR9Q6ZVX9 377 aa16.47■□□□□ 0.23
CCDC113-203ENST00000561517 YAF2Q8IY57 180 aa16.47■□□□□ 0.23
CCDC113-203ENST00000561517 CELF5Q8N6W0 485 aaKnown RBP16.47■□□□□ 0.23
CCDC113-203ENST00000561517 MAB21L3Q8N8X9 362 aa16.47■□□□□ 0.23
CCDC113-203ENST00000561517 DTWD2Q8NBA8 298 aa16.47■□□□□ 0.23
CCDC113-203ENST00000561517 FAXDC2Q96IV6 333 aa16.47■□□□□ 0.23
CCDC113-203ENST00000561517 MMRN2Q9H8L6 949 aa16.47■□□□□ 0.23
CCDC113-203ENST00000561517 CYP3A43Q9HB55 503 aa16.47■□□□□ 0.23
CCDC113-203ENST00000561517 LTB4R2Q9NPC1 389 aa16.47■□□□□ 0.23
CCDC113-203ENST00000561517 FANCMQ8IYD8 2048 aa16.46■□□□□ 0.23
CCDC113-203ENST00000561517 ATP8B3O60423 1300 aa16.46■□□□□ 0.23
CCDC113-203ENST00000561517 LRRN2O75325 713 aa16.46■□□□□ 0.23
CCDC113-203ENST00000561517 GLULP15104 373 aa16.46■□□□□ 0.23
CCDC113-203ENST00000561517 AVPR1AP37288 418 aa16.46■□□□□ 0.23
CCDC113-203ENST00000561517 MLLT6P55198 1093 aaPredicted RBP16.46■□□□□ 0.23
CCDC113-203ENST00000561517 USP46P62068 366 aa16.46■□□□□ 0.23
CCDC113-203ENST00000561517 ZNF268Q14587 947 aaPredicted RBP16.46■□□□□ 0.23
CCDC113-203ENST00000561517 ARHGAP29Q52LW3 1261 aa16.46■□□□□ 0.23
CCDC113-203ENST00000561517 TTI2Q6NXR4 508 aa16.46■□□□□ 0.23
CCDC113-203ENST00000561517 ACOT1Q86TX2 421 aa16.46■□□□□ 0.23
CCDC113-203ENST00000561517 FAM35AQ86V20 835 aa16.46■□□□□ 0.23
CCDC113-203ENST00000561517 FBXL13Q8NEE6 735 aa16.46■□□□□ 0.23
CCDC113-203ENST00000561517 BPIFB1Q8TDL5 484 aa16.46■□□□□ 0.23
CCDC113-203ENST00000561517 SEMA4DQ92854 862 aa16.46■□□□□ 0.23
CCDC113-203ENST00000561517 USP13Q92995 863 aaPredicted RBP16.46■□□□□ 0.23
CCDC113-203ENST00000561517 CEP63Q96MT8 703 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms