RNA–Protein interactions for RNA: ENST00000560641.5

PBX1-219, Transcript of PBX homeobox 1, humanhuman

TSL 5 BASIC

Gene PBX1, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-219ENST00000560641 TFDP1Q14186 410 aa16.79■□□□□ 0.28
PBX1-219ENST00000560641 PLEKHA7Q6IQ23 1121 aa16.79■□□□□ 0.28
PBX1-219ENST00000560641 B3GNT9Q6UX72 402 aa16.79■□□□□ 0.28
PBX1-219ENST00000560641 RNF168Q8IYW5 571 aaPredicted RBP16.79■□□□□ 0.28
PBX1-219ENST00000560641 DAW1Q8N136 415 aa16.79■□□□□ 0.28
PBX1-219ENST00000560641 ZNF513Q8N8E2 541 aaPredicted RBP16.79■□□□□ 0.28
PBX1-219ENST00000560641 CHMP2BQ9UQN3 213 aa16.79■□□□□ 0.28
PBX1-219ENST00000560641 SF3B1O75533 1304 aaKnown RBP eCLIP16.78■□□□□ 0.28
PBX1-219ENST00000560641 SPAG6O75602 509 aa16.78■□□□□ 0.28
PBX1-219ENST00000560641 ACAT1P24752 427 aaKnown RBP16.78■□□□□ 0.28
PBX1-219ENST00000560641 HEMGNQ9BXL5 484 aa16.78■□□□□ 0.28
PBX1-219ENST00000560641 TMEM8AQ9HCN3 771 aa16.78■□□□□ 0.28
PBX1-219ENST00000560641 C6orf203Q9P0P8 240 aaPredicted RBP16.78■□□□□ 0.28
PBX1-219ENST00000560641 EFR3BQ9Y2G0 817 aa16.78■□□□□ 0.28
PBX1-219ENST00000560641 WDR91A4D1P6 747 aa16.78■□□□□ 0.28
PBX1-219ENST00000560641 BAG2O95816 211 aa16.78■□□□□ 0.28
PBX1-219ENST00000560641 CLPTM1O96005 669 aa16.78■□□□□ 0.28
PBX1-219ENST00000560641 FDFT1P37268 417 aa16.78■□□□□ 0.28
PBX1-219ENST00000560641 FOLH1Q04609 750 aa16.78■□□□□ 0.28
PBX1-219ENST00000560641 CC2D2BQ6DHV5 1058 aa16.78■□□□□ 0.28
PBX1-219ENST00000560641 SLC35B2Q8TB61 432 aa16.78■□□□□ 0.28
PBX1-219ENST00000560641 SEMA4DQ92854 862 aa16.78■□□□□ 0.28
PBX1-219ENST00000560641 ACCSQ96QU6 501 aa16.78■□□□□ 0.28
PBX1-219ENST00000560641 MRPL47Q9HD33 250 aaKnown RBP16.78■□□□□ 0.28
PBX1-219ENST00000560641 BTBD7Q9P203 1132 aa16.78■□□□□ 0.28
PBX1-219ENST00000560641 TUBGCP4Q9UGJ1 667 aa16.78■□□□□ 0.28
PBX1-219ENST00000560641 H3BNX3 289 aa16.77■□□□□ 0.28
PBX1-219ENST00000560641 MT-ND3P03897 115 aa16.77■□□□□ 0.28
PBX1-219ENST00000560641 L1CAMP32004 1257 aa16.77■□□□□ 0.28
PBX1-219ENST00000560641 PLOD1Q02809 727 aaPredicted RBP16.77■□□□□ 0.28
PBX1-219ENST00000560641 CBX3Q13185 183 aa16.77■□□□□ 0.28
PBX1-219ENST00000560641 ITPK1Q13572 414 aa16.77■□□□□ 0.28
PBX1-219ENST00000560641 EFTUD2Q15029 972 aaKnown RBP eCLIP16.77■□□□□ 0.28
PBX1-219ENST00000560641 KRT39Q6A163 491 aa16.77■□□□□ 0.28
PBX1-219ENST00000560641 TRIM72Q6ZMU5 477 aa16.77■□□□□ 0.28
PBX1-219ENST00000560641 BRINP3Q76B58 766 aa16.77■□□□□ 0.28
PBX1-219ENST00000560641 KBTBD6Q86V97 674 aa16.77■□□□□ 0.28
PBX1-219ENST00000560641 PYROXD1Q8WU10 500 aa16.77■□□□□ 0.28
PBX1-219ENST00000560641 CLPTM1LQ96KA5 538 aa16.77■□□□□ 0.28
PBX1-219ENST00000560641 CYTH2Q99418 400 aa16.77■□□□□ 0.28
PBX1-219ENST00000560641 Q9H521 79 aa16.77■□□□□ 0.28
PBX1-219ENST00000560641 ZNF180Q9UJW8 692 aa16.77■□□□□ 0.28
PBX1-219ENST00000560641 LGR5O75473 907 aa16.77■□□□□ 0.28
PBX1-219ENST00000560641 IL1R1P14778 569 aa16.77■□□□□ 0.28
PBX1-219ENST00000560641 ECE1P42892 770 aa16.77■□□□□ 0.28
PBX1-219ENST00000560641 Q6ZNX1 250 aa16.77■□□□□ 0.28
PBX1-219ENST00000560641 PRPF39Q86UA1 669 aaKnown RBP16.77■□□□□ 0.28
PBX1-219ENST00000560641 ICA1LQ8NDH6 482 aa16.77■□□□□ 0.28
PBX1-219ENST00000560641 SERAC1Q96JX3 654 aa16.77■□□□□ 0.28
PBX1-219ENST00000560641 HSPBP1Q9NZL4 362 aa16.77■□□□□ 0.28
PBX1-219ENST00000560641 ZNF148Q9UQR1 794 aa16.77■□□□□ 0.28
PBX1-219ENST00000560641 MAD1L1Q9Y6D9 718 aa16.77■□□□□ 0.28
PBX1-219ENST00000560641 SIPA1L1O43166 1804 aa16.77■□□□□ 0.27
PBX1-219ENST00000560641 A0A0B4J269 797 aa16.77■□□□□ 0.27
PBX1-219ENST00000560641 TNFAIP8O95379 198 aa16.77■□□□□ 0.27
PBX1-219ENST00000560641 TUBB3Q13509 450 aa16.77■□□□□ 0.27
PBX1-219ENST00000560641 NADK2Q4G0N4 442 aa16.77■□□□□ 0.27
PBX1-219ENST00000560641 PLA2G4FQ68DD2 849 aa16.77■□□□□ 0.27
PBX1-219ENST00000560641 TICAM1Q8IUC6 712 aa16.77■□□□□ 0.27
PBX1-219ENST00000560641 RTKN2Q8IZC4 609 aa16.77■□□□□ 0.27
PBX1-219ENST00000560641 ZFP28Q8NHY6 868 aa16.77■□□□□ 0.27
PBX1-219ENST00000560641 TMC2Q8TDI7 906 aa16.77■□□□□ 0.27
PBX1-219ENST00000560641 ACP6Q9NPH0 428 aa16.77■□□□□ 0.27
PBX1-219ENST00000560641 SCINQ9Y6U3 715 aa16.77■□□□□ 0.27
PBX1-219ENST00000560641 PEX2P28328 305 aa16.76■□□□□ 0.27
PBX1-219ENST00000560641 GTF2BQ00403 316 aa16.76■□□□□ 0.27
PBX1-219ENST00000560641 RABGAP1LQ5R372 815 aa16.76■□□□□ 0.27
PBX1-219ENST00000560641 DPP8Q6V1X1 898 aaPredicted RBP16.76■□□□□ 0.27
PBX1-219ENST00000560641 PHF13Q86YI8 300 aaPredicted RBP16.76■□□□□ 0.27
PBX1-219ENST00000560641 PPM1KQ8N3J5 372 aa16.76■□□□□ 0.27
PBX1-219ENST00000560641 GSTCDQ8NEC7 633 aa16.76■□□□□ 0.27
PBX1-219ENST00000560641 TRPC4APQ8TEL6 797 aa16.76■□□□□ 0.27
PBX1-219ENST00000560641 NT5C1BQ96P26 610 aa16.76■□□□□ 0.27
PBX1-219ENST00000560641 RHBDL2Q9NX52 303 aa16.76■□□□□ 0.27
PBX1-219ENST00000560641 ARID2Q68CP9 1835 aa16.76■□□□□ 0.27
PBX1-219ENST00000560641 I3L4J1 428 aa16.76■□□□□ 0.27
PBX1-219ENST00000560641 CPA2P48052 419 aa16.76■□□□□ 0.27
PBX1-219ENST00000560641 PRELPP51888 382 aa16.76■□□□□ 0.27
PBX1-219ENST00000560641 NOP14P78316 857 aaKnown RBP16.76■□□□□ 0.27
PBX1-219ENST00000560641 FAM111AQ96PZ2 611 aa16.76■□□□□ 0.27
PBX1-219ENST00000560641 PLLPQ9Y342 182 aa16.76■□□□□ 0.27
PBX1-219ENST00000560641 LOC102724428A0A0B4J2F2 783 aa16.75■□□□□ 0.27
PBX1-219ENST00000560641 KANSL1LA0AUZ9 987 aa16.75■□□□□ 0.27
PBX1-219ENST00000560641 ZSCAN5DPP0CG00 497 aa16.75■□□□□ 0.27
PBX1-219ENST00000560641 SLC16A2P36021 539 aa16.75■□□□□ 0.27
PBX1-219ENST00000560641 SIK1P57059 783 aa16.75■□□□□ 0.27
PBX1-219ENST00000560641 TLR1Q15399 786 aa16.75■□□□□ 0.27
PBX1-219ENST00000560641 ARCQ7LC44 396 aa16.75■□□□□ 0.27
PBX1-219ENST00000560641 ZNF410Q86VK4 478 aa16.75■□□□□ 0.27
PBX1-219ENST00000560641 CPT1BQ92523 772 aa16.75■□□□□ 0.27
PBX1-219ENST00000560641 DHX33Q9H6R0 707 aaKnown RBP16.75■□□□□ 0.27
PBX1-219ENST00000560641 HBS1LQ9Y450 684 aaKnown RBP16.75■□□□□ 0.27
PBX1-219ENST00000560641 KLHL2O95198 593 aa16.75■□□□□ 0.27
PBX1-219ENST00000560641 C1QAP02745 245 aa16.75■□□□□ 0.27
PBX1-219ENST00000560641 MYL4P12829 197 aa16.75■□□□□ 0.27
PBX1-219ENST00000560641 PRDX6P30041 224 aa16.75■□□□□ 0.27
PBX1-219ENST00000560641 MAGEA10P43363 369 aaPredicted RBP16.75■□□□□ 0.27
PBX1-219ENST00000560641 MAMLD1Q13495 774 aa16.75■□□□□ 0.27
PBX1-219ENST00000560641 LLGL1Q15334 1064 aa16.75■□□□□ 0.27
PBX1-219ENST00000560641 LPCAT4Q643R3 524 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms