RNA–Protein interactions for RNA: ENST00000560514.1

TSPAN3-208, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 638 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-208ENST00000560514 LYSMD4Q5XG99 296 aa19.16■□□□□ 0.66
TSPAN3-208ENST00000560514 ADALQ6DHV7 355 aa19.16■□□□□ 0.66
TSPAN3-208ENST00000560514 PGBD3Q8N328 593 aa19.16■□□□□ 0.66
TSPAN3-208ENST00000560514 ARL14EPQ8N8R7 260 aaPredicted RBP19.16■□□□□ 0.66
TSPAN3-208ENST00000560514 LEO1Q8WVC0 666 aaPredicted RBP19.16■□□□□ 0.66
TSPAN3-208ENST00000560514 RLN3Q8WXF3 142 aa19.16■□□□□ 0.66
TSPAN3-208ENST00000560514 LLPHQ9BRT6 129 aaKnown RBP19.16■□□□□ 0.66
TSPAN3-208ENST00000560514 GTPBP2Q9BX10 602 aaKnown RBP19.16■□□□□ 0.66
TSPAN3-208ENST00000560514 ABCB6Q9NP58 842 aa19.16■□□□□ 0.66
TSPAN3-208ENST00000560514 TMLHEQ9NVH6 421 aa19.16■□□□□ 0.66
TSPAN3-208ENST00000560514 TADA3O75528 432 aa19.15■□□□□ 0.66
TSPAN3-208ENST00000560514 CYP2F1P24903 491 aa19.15■□□□□ 0.66
TSPAN3-208ENST00000560514 P2RY2P41231 377 aa19.15■□□□□ 0.66
TSPAN3-208ENST00000560514 PNPLA4P41247 253 aa19.15■□□□□ 0.66
TSPAN3-208ENST00000560514 MYL7Q01449 175 aa19.15■□□□□ 0.66
TSPAN3-208ENST00000560514 ST3GAL1Q11201 340 aa19.15■□□□□ 0.66
TSPAN3-208ENST00000560514 IL17AQ16552 155 aa19.15■□□□□ 0.66
TSPAN3-208ENST00000560514 KCNN1Q92952 543 aa19.15■□□□□ 0.66
TSPAN3-208ENST00000560514 MYRFLQ96LU7 910 aa19.15■□□□□ 0.66
TSPAN3-208ENST00000560514 PNMA5Q96PV4 448 aa19.15■□□□□ 0.66
TSPAN3-208ENST00000560514 SLC22A12Q96S37 553 aa19.15■□□□□ 0.66
TSPAN3-208ENST00000560514 LINC00597Q9H2U6 94 aa19.15■□□□□ 0.66
TSPAN3-208ENST00000560514 ZHX3Q9H4I2 956 aa19.15■□□□□ 0.66
TSPAN3-208ENST00000560514 PARVGQ9HBI0 331 aa19.15■□□□□ 0.66
TSPAN3-208ENST00000560514 PTPRDP23468 1912 aa19.15■□□□□ 0.66
TSPAN3-208ENST00000560514 CACNA1EQ15878 2313 aa19.14■□□□□ 0.66
TSPAN3-208ENST00000560514 ANAPC1Q9H1A4 1944 aa19.14■□□□□ 0.65
TSPAN3-208ENST00000560514 TAF4O00268 1085 aa19.14■□□□□ 0.65
TSPAN3-208ENST00000560514 OPHN1O60890 802 aa19.14■□□□□ 0.65
TSPAN3-208ENST00000560514 HUS1O60921 280 aa19.14■□□□□ 0.65
TSPAN3-208ENST00000560514 KRT18P05783 430 aaKnown RBP19.14■□□□□ 0.65
TSPAN3-208ENST00000560514 OPRD1P41143 372 aa19.14■□□□□ 0.65
TSPAN3-208ENST00000560514 TOB1P50616 345 aaPredicted RBP19.14■□□□□ 0.65
TSPAN3-208ENST00000560514 GFPT1Q06210 699 aaPredicted RBP19.14■□□□□ 0.65
TSPAN3-208ENST00000560514 SEMA3BQ13214 749 aa19.14■□□□□ 0.65
TSPAN3-208ENST00000560514 SPDYCQ5MJ68 293 aa19.14■□□□□ 0.65
TSPAN3-208ENST00000560514 EOGTQ5NDL2 527 aa19.14■□□□□ 0.65
TSPAN3-208ENST00000560514 SLFN12LQ6IEE8 588 aa19.14■□□□□ 0.65
TSPAN3-208ENST00000560514 SLC23A3Q6PIS1 610 aa19.14■□□□□ 0.65
TSPAN3-208ENST00000560514 SPATA2LQ8IUW3 424 aaPredicted RBP19.14■□□□□ 0.65
TSPAN3-208ENST00000560514 SCN4BQ8IWT1 228 aa19.14■□□□□ 0.65
TSPAN3-208ENST00000560514 TXNDC5Q8NBS9 432 aaKnown RBP19.14■□□□□ 0.65
TSPAN3-208ENST00000560514 OLIG1Q8TAK6 271 aa19.14■□□□□ 0.65
TSPAN3-208ENST00000560514 CEP76Q8TAP6 659 aa19.14■□□□□ 0.65
TSPAN3-208ENST00000560514 SPATA18Q8TC71 538 aa19.14■□□□□ 0.65
TSPAN3-208ENST00000560514 ACBD6Q9BR61 282 aa19.14■□□□□ 0.65
TSPAN3-208ENST00000560514 DDX43Q9NXZ2 648 aaKnown RBP19.14■□□□□ 0.65
TSPAN3-208ENST00000560514 AGO2Q9UKV8 859 aaKnown RBP19.14■□□□□ 0.65
TSPAN3-208ENST00000560514 ARHGAP26Q9UNA1 814 aa19.14■□□□□ 0.65
TSPAN3-208ENST00000560514 LIMCH1Q9UPQ0 1083 aa19.14■□□□□ 0.65
TSPAN3-208ENST00000560514 ATXN2Q99700 1313 aaKnown RBP19.14■□□□□ 0.65
TSPAN3-208ENST00000560514 TNRC6BQ9UPQ9 1833 aaKnown RBP19.14■□□□□ 0.65
TSPAN3-208ENST00000560514 HELZP42694 1942 aaKnown RBP19.13■□□□□ 0.65
TSPAN3-208ENST00000560514 ADAMTS20P59510 1910 aa19.13■□□□□ 0.65
TSPAN3-208ENST00000560514 UPK3BL1B0FP48 263 aa19.13■□□□□ 0.65
TSPAN3-208ENST00000560514 UPK3BL2E5RIL1 263 aa19.13■□□□□ 0.65
TSPAN3-208ENST00000560514 TRAK2O60296 914 aa19.13■□□□□ 0.65
TSPAN3-208ENST00000560514 KLF8O95600 359 aaPredicted RBP19.13■□□□□ 0.65
TSPAN3-208ENST00000560514 HOXD12P35452 270 aa19.13■□□□□ 0.65
TSPAN3-208ENST00000560514 PTGER3P43115 390 aa19.13■□□□□ 0.65
TSPAN3-208ENST00000560514 HNRNPDQ14103 355 aaKnown RBP19.13■□□□□ 0.65
TSPAN3-208ENST00000560514 DHX8Q14562 1220 aaKnown RBP19.13■□□□□ 0.65
TSPAN3-208ENST00000560514 DUOXA1Q1HG43 343 aa19.13■□□□□ 0.65
TSPAN3-208ENST00000560514 ZNF423Q2M1K9 1284 aa19.13■□□□□ 0.65
TSPAN3-208ENST00000560514 HSF5Q4G112 596 aaPredicted RBP19.13■□□□□ 0.65
TSPAN3-208ENST00000560514 INTS6LQ5JSJ4 861 aaKnown RBP19.13■□□□□ 0.65
TSPAN3-208ENST00000560514 TMEM92Q6UXU6 159 aa19.13■□□□□ 0.65
TSPAN3-208ENST00000560514 PIP4P1Q86T03 277 aa19.13■□□□□ 0.65
TSPAN3-208ENST00000560514 GPBP1Q86WP2 473 aa19.13■□□□□ 0.65
TSPAN3-208ENST00000560514 PROSER1Q86XN7 944 aa19.13■□□□□ 0.65
TSPAN3-208ENST00000560514 ALLCQ8N6M5 410 aa19.13■□□□□ 0.65
TSPAN3-208ENST00000560514 FNBP1Q96RU3 617 aa19.13■□□□□ 0.65
TSPAN3-208ENST00000560514 REEP2Q9BRK0 252 aa19.13■□□□□ 0.65
TSPAN3-208ENST00000560514 TMEM74BQ9NUR3 256 aa19.13■□□□□ 0.65
TSPAN3-208ENST00000560514 SLC6A14Q9UN76 642 aa19.13■□□□□ 0.65
TSPAN3-208ENST00000560514 ADAMTS9Q9P2N4 1935 aa19.13■□□□□ 0.65
TSPAN3-208ENST00000560514 DMXL2Q8TDJ6 3036 aa19.13■□□□□ 0.65
TSPAN3-208ENST00000560514 C2orf78A6NCI8 922 aa19.12■□□□□ 0.65
TSPAN3-208ENST00000560514 APODP05090 189 aa19.12■□□□□ 0.65
TSPAN3-208ENST00000560514 TCF3P15923 654 aa19.12■□□□□ 0.65
TSPAN3-208ENST00000560514 ACAT1P24752 427 aaKnown RBP19.12■□□□□ 0.65
TSPAN3-208ENST00000560514 TIE1P35590 1138 aa19.12■□□□□ 0.65
TSPAN3-208ENST00000560514 ZC2HC1CQ53FD0 456 aaPredicted RBP19.12■□□□□ 0.65
TSPAN3-208ENST00000560514 ARSHQ5FYA8 562 aa19.12■□□□□ 0.65
TSPAN3-208ENST00000560514 RABEPKQ7Z6M1 372 aa19.12■□□□□ 0.65
TSPAN3-208ENST00000560514 NT5DC4Q86YG4 428 aa19.12■□□□□ 0.65
TSPAN3-208ENST00000560514 TMEM86AQ8N2M4 240 aa19.12■□□□□ 0.65
TSPAN3-208ENST00000560514 PDCL2Q8N4E4 241 aa19.12■□□□□ 0.65
TSPAN3-208ENST00000560514 CHCHD4Q8N4Q1 142 aa19.12■□□□□ 0.65
TSPAN3-208ENST00000560514 HMGB4Q8WW32 186 aa19.12■□□□□ 0.65
TSPAN3-208ENST00000560514 PNKPQ96T60 521 aa19.12■□□□□ 0.65
TSPAN3-208ENST00000560514 EIF4ENIF1Q9NRA8 985 aaKnown RBP19.12■□□□□ 0.65
TSPAN3-208ENST00000560514 GCNT4Q9P109 453 aa19.12■□□□□ 0.65
TSPAN3-208ENST00000560514 PILRBQ9UKJ0 227 aa19.12■□□□□ 0.65
TSPAN3-208ENST00000560514 GTF3C4Q9UKN8 822 aa19.12■□□□□ 0.65
TSPAN3-208ENST00000560514 CEP192Q8TEP8 1941 aa19.12■□□□□ 0.65
TSPAN3-208ENST00000560514 DSPP15924 2871 aaKnown RBP19.11■□□□□ 0.65
TSPAN3-208ENST00000560514 VWA3AA6NCI4 1184 aa19.11■□□□□ 0.65
TSPAN3-208ENST00000560514 AP5Z1O43299 807 aa19.11■□□□□ 0.65
TSPAN3-208ENST00000560514 TBCAO75347 108 aaKnown RBP19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms