RNA–Protein interactions for RNA: ENST00000560243.5

RABGGTA-216, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 704 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-216ENST00000560243 TASP1Q9H6P5 420 aa12.42□□□□□ -0.42
RABGGTA-216ENST00000560243 BRD9Q9H8M2 597 aa12.42□□□□□ -0.42
RABGGTA-216ENST00000560243 HEBP1Q9NRV9 189 aa12.42□□□□□ -0.42
RABGGTA-216ENST00000560243 ZFHX2Q9C0A1 2572 aaPredicted RBP12.42□□□□□ -0.42
RABGGTA-216ENST00000560243 CACNA1IQ9P0X4 2223 aa12.42□□□□□ -0.42
RABGGTA-216ENST00000560243 MIA3Q5JRA6 1907 aa12.41□□□□□ -0.42
RABGGTA-216ENST00000560243 PPP1R3GB7ZBB8 358 aa12.41□□□□□ -0.42
RABGGTA-216ENST00000560243 F8VP50 259 aa12.41□□□□□ -0.42
RABGGTA-216ENST00000560243 H0Y858 1186 aa12.41□□□□□ -0.42
RABGGTA-216ENST00000560243 ARNTLO00327 626 aa12.41□□□□□ -0.42
RABGGTA-216ENST00000560243 GALR2O43603 387 aaPredicted RBP12.41□□□□□ -0.42
RABGGTA-216ENST00000560243 GLULP15104 373 aa12.41□□□□□ -0.42
RABGGTA-216ENST00000560243 RFX1P22670 979 aa12.41□□□□□ -0.42
RABGGTA-216ENST00000560243 ANP32AP39687 249 aaKnown RBP12.41□□□□□ -0.42
RABGGTA-216ENST00000560243 NDST1P52848 882 aa12.41□□□□□ -0.42
RABGGTA-216ENST00000560243 PFKPQ01813 784 aa12.41□□□□□ -0.42
RABGGTA-216ENST00000560243 MORC3Q14149 939 aa12.41□□□□□ -0.42
RABGGTA-216ENST00000560243 KLHL10Q6JEL2 608 aa12.41□□□□□ -0.42
RABGGTA-216ENST00000560243 PHLDB3Q6NSJ2 640 aa12.41□□□□□ -0.42
RABGGTA-216ENST00000560243 VSTM1Q6UX27 236 aa12.41□□□□□ -0.42
RABGGTA-216ENST00000560243 TPRG1Q6ZUI0 275 aa12.41□□□□□ -0.42
RABGGTA-216ENST00000560243 PAQR9Q6ZVX9 377 aa12.41□□□□□ -0.42
RABGGTA-216ENST00000560243 ACOT1Q86TX2 421 aa12.41□□□□□ -0.42
RABGGTA-216ENST00000560243 RIN3Q8TB24 985 aa12.41□□□□□ -0.42
RABGGTA-216ENST00000560243 TAF4BQ92750 862 aa12.41□□□□□ -0.42
RABGGTA-216ENST00000560243 TRMT2BQ96GJ1 504 aaKnown RBP12.41□□□□□ -0.42
RABGGTA-216ENST00000560243 ZFYVE19Q96K21 471 aa12.41□□□□□ -0.42
RABGGTA-216ENST00000560243 SLC22A12Q96S37 553 aa12.41□□□□□ -0.42
RABGGTA-216ENST00000560243 PHOX2BQ99453 314 aa12.41□□□□□ -0.42
RABGGTA-216ENST00000560243 TSG101Q99816 390 aa12.41□□□□□ -0.42
RABGGTA-216ENST00000560243 DUSP9Q99956 384 aaKnown RBP12.41□□□□□ -0.42
RABGGTA-216ENST00000560243 DDX23Q9BUQ8 820 aaKnown RBP12.41□□□□□ -0.42
RABGGTA-216ENST00000560243 TMEM8AQ9HCN3 771 aa12.41□□□□□ -0.42
RABGGTA-216ENST00000560243 FAM86C1Q9NVL1 165 aa12.41□□□□□ -0.42
RABGGTA-216ENST00000560243 CCL26Q9Y258 94 aa12.41□□□□□ -0.42
RABGGTA-216ENST00000560243 KIF26AQ9ULI4 1882 aaPredicted RBP12.4□□□□□ -0.42
RABGGTA-216ENST00000560243 MYO15AQ9UKN7 3530 aa12.4□□□□□ -0.42
RABGGTA-216ENST00000560243 EPB41P11171 864 aaKnown RBP12.4□□□□□ -0.42
RABGGTA-216ENST00000560243 CCDC130P13994 396 aa12.4□□□□□ -0.42
RABGGTA-216ENST00000560243 CCNE1P24864 410 aa12.4□□□□□ -0.42
RABGGTA-216ENST00000560243 UBE2HP62256 183 aa12.4□□□□□ -0.42
RABGGTA-216ENST00000560243 NOP14P78316 857 aaKnown RBP12.4□□□□□ -0.42
RABGGTA-216ENST00000560243 FKBP3Q00688 224 aaKnown RBP12.4□□□□□ -0.42
RABGGTA-216ENST00000560243 PRKCQQ04759 706 aa12.4□□□□□ -0.42
RABGGTA-216ENST00000560243 ENPEPQ07075 957 aa12.4□□□□□ -0.42
RABGGTA-216ENST00000560243 FCHO2Q0JRZ9 810 aa12.4□□□□□ -0.42
RABGGTA-216ENST00000560243 CAMK4Q16566 473 aa12.4□□□□□ -0.42
RABGGTA-216ENST00000560243 CBWD6Q4V339 395 aa12.4□□□□□ -0.42
RABGGTA-216ENST00000560243 CBWD3Q5JTY5 395 aa12.4□□□□□ -0.42
RABGGTA-216ENST00000560243 CBWD5Q5RIA9 395 aa12.4□□□□□ -0.42
RABGGTA-216ENST00000560243 MON1AQ86VX9 555 aa12.4□□□□□ -0.42
RABGGTA-216ENST00000560243 CCDC105Q8IYK2 499 aa12.4□□□□□ -0.42
RABGGTA-216ENST00000560243 CMTM8Q8IZV2 173 aa12.4□□□□□ -0.42
RABGGTA-216ENST00000560243 C12orf29Q8N999 325 aa12.4□□□□□ -0.42
RABGGTA-216ENST00000560243 DTWD2Q8NBA8 298 aa12.4□□□□□ -0.42
RABGGTA-216ENST00000560243 PJA1Q8NG27 643 aa12.4□□□□□ -0.42
RABGGTA-216ENST00000560243 DEPDC1BQ8WUY9 529 aa12.4□□□□□ -0.42
RABGGTA-216ENST00000560243 MRPS31Q92665 395 aaKnown RBP12.4□□□□□ -0.42
RABGGTA-216ENST00000560243 DNASE1L2Q92874 299 aa12.4□□□□□ -0.42
RABGGTA-216ENST00000560243 USP13Q92995 863 aaPredicted RBP12.4□□□□□ -0.42
RABGGTA-216ENST00000560243 SHDQ96IW2 340 aa12.4□□□□□ -0.42
RABGGTA-216ENST00000560243 SPATA17Q96L03 361 aa12.4□□□□□ -0.42
RABGGTA-216ENST00000560243 TWNKQ96RR1 684 aa12.4□□□□□ -0.42
RABGGTA-216ENST00000560243 CYP2S1Q96SQ9 504 aa12.4□□□□□ -0.42
RABGGTA-216ENST00000560243 KCNK16Q96T55 309 aa12.4□□□□□ -0.42
RABGGTA-216ENST00000560243 BCO2Q9BYV7 579 aa12.4□□□□□ -0.42
RABGGTA-216ENST00000560243 DLGAP2Q9P1A6 1054 aa12.4□□□□□ -0.42
RABGGTA-216ENST00000560243 SIT1Q9Y3P8 196 aa12.4□□□□□ -0.42
RABGGTA-216ENST00000560243 MYH10P35580 1976 aa12.39□□□□□ -0.43
RABGGTA-216ENST00000560243 KANSL1LA0AUZ9 987 aa12.39□□□□□ -0.43
RABGGTA-216ENST00000560243 C2orf78A6NCI8 922 aa12.39□□□□□ -0.43
RABGGTA-216ENST00000560243 PSMA7O14818 248 aa12.39□□□□□ -0.43
RABGGTA-216ENST00000560243 ZNF263O14978 683 aa12.39□□□□□ -0.43
RABGGTA-216ENST00000560243 P4HA1P13674 534 aa12.39□□□□□ -0.43
RABGGTA-216ENST00000560243 TARSP26639 723 aaKnown RBP12.39□□□□□ -0.43
RABGGTA-216ENST00000560243 ANXA13P27216 316 aa12.39□□□□□ -0.43
RABGGTA-216ENST00000560243 WEE1P30291 646 aa12.39□□□□□ -0.43
RABGGTA-216ENST00000560243 GTF2H1P32780 548 aa12.39□□□□□ -0.43
RABGGTA-216ENST00000560243 SOX9P48436 509 aa12.39□□□□□ -0.43
RABGGTA-216ENST00000560243 MXI1P50539 228 aa12.39□□□□□ -0.43
RABGGTA-216ENST00000560243 PTPN5P54829 565 aa12.39□□□□□ -0.43
RABGGTA-216ENST00000560243 LRRC63Q05C16 580 aa12.39□□□□□ -0.43
RABGGTA-216ENST00000560243 TNK2Q07912 1038 aa12.39□□□□□ -0.43
RABGGTA-216ENST00000560243 UBXN2BQ14CS0 331 aa12.39□□□□□ -0.43
RABGGTA-216ENST00000560243 DCAF17Q5H9S7 520 aaPredicted RBP12.39□□□□□ -0.43
RABGGTA-216ENST00000560243 TCERG1LQ5VWI1 586 aa12.39□□□□□ -0.43
RABGGTA-216ENST00000560243 KRT39Q6A163 491 aa12.39□□□□□ -0.43
RABGGTA-216ENST00000560243 TTI2Q6NXR4 508 aa12.39□□□□□ -0.43
RABGGTA-216ENST00000560243 FAM35AQ86V20 835 aa12.39□□□□□ -0.43
RABGGTA-216ENST00000560243 YAF2Q8IY57 180 aa12.39□□□□□ -0.43
RABGGTA-216ENST00000560243 FUKQ8N0W3 1084 aa12.39□□□□□ -0.43
RABGGTA-216ENST00000560243 TTC8Q8TAM2 541 aa12.39□□□□□ -0.43
RABGGTA-216ENST00000560243 NELFBQ8WX92 580 aa12.39□□□□□ -0.43
RABGGTA-216ENST00000560243 IRF7Q92985 503 aa12.39□□□□□ -0.43
RABGGTA-216ENST00000560243 E2F7Q96AV8 911 aa12.39□□□□□ -0.43
RABGGTA-216ENST00000560243 DHTKD1Q96HY7 919 aaPredicted RBP12.39□□□□□ -0.43
RABGGTA-216ENST00000560243 C8orf48Q96LL4 319 aa12.39□□□□□ -0.43
RABGGTA-216ENST00000560243 PRRX2Q99811 253 aa12.39□□□□□ -0.43
RABGGTA-216ENST00000560243 ARID3AQ99856 593 aa12.39□□□□□ -0.43
RABGGTA-216ENST00000560243 ELOVL4Q9GZR5 314 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms