RNA–Protein interactions for RNA: ENST00000560236.1

LRRC28-218, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 703 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-218ENST00000560236 IPPQ9Y573 584 aa4.47□□□□□ -1.69
LRRC28-218ENST00000560236 FYCO1Q9BQS8 1478 aa4.47□□□□□ -1.69
LRRC28-218ENST00000560236 SLIT2O94813 1529 aa4.46□□□□□ -1.69
LRRC28-218ENST00000560236 XRN1Q8IZH2 1706 aaKnown RBP4.46□□□□□ -1.69
LRRC28-218ENST00000560236 PLCH1Q4KWH8 1693 aa4.46□□□□□ -1.7
LRRC28-218ENST00000560236 TLDC2A0PJX2 215 aa4.46□□□□□ -1.7
LRRC28-218ENST00000560236 HTRA2O43464 458 aaPredicted RBP4.46□□□□□ -1.7
LRRC28-218ENST00000560236 JTBO76095 146 aa4.46□□□□□ -1.7
LRRC28-218ENST00000560236 NXPH3O95157 252 aa4.46□□□□□ -1.7
LRRC28-218ENST00000560236 HOXB6P17509 224 aaKnown RBP4.46□□□□□ -1.7
LRRC28-218ENST00000560236 C5AR1P21730 350 aa4.46□□□□□ -1.7
LRRC28-218ENST00000560236 LPOP22079 712 aaPredicted RBP4.46□□□□□ -1.7
LRRC28-218ENST00000560236 PSMC1P62191 440 aaKnown RBP4.46□□□□□ -1.7
LRRC28-218ENST00000560236 IDI1Q13907 227 aa4.46□□□□□ -1.7
LRRC28-218ENST00000560236 C3orf36Q3SXR2 165 aa4.46□□□□□ -1.7
LRRC28-218ENST00000560236 CCDC93Q567U6 631 aa4.46□□□□□ -1.7
LRRC28-218ENST00000560236 RBM20Q5T481 1227 aaKnown RBP4.46□□□□□ -1.7
LRRC28-218ENST00000560236 KRT26Q7Z3Y9 468 aa4.46□□□□□ -1.7
LRRC28-218ENST00000560236 PDSS2Q86YH6 399 aa4.46□□□□□ -1.7
LRRC28-218ENST00000560236 DENND1AQ8TEH3 1009 aa4.46□□□□□ -1.7
LRRC28-218ENST00000560236 SMOC2Q9H3U7 446 aa4.46□□□□□ -1.7
LRRC28-218ENST00000560236 BRD9Q9H8M2 597 aa4.46□□□□□ -1.7
LRRC28-218ENST00000560236 MAN1C1Q9NR34 630 aa4.46□□□□□ -1.7
LRRC28-218ENST00000560236 ARHGEF3Q9NR81 526 aa4.46□□□□□ -1.7
LRRC28-218ENST00000560236 MKS1Q9NXB0 559 aa4.46□□□□□ -1.7
LRRC28-218ENST00000560236 SH3BP4Q9P0V3 963 aa4.46□□□□□ -1.7
LRRC28-218ENST00000560236 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.46□□□□□ -1.7
LRRC28-218ENST00000560236 PCDHB1Q9Y5F3 818 aa4.46□□□□□ -1.7
LRRC28-218ENST00000560236 DUOX2Q9NRD8 1548 aa4.46□□□□□ -1.7
LRRC28-218ENST00000560236 ZFYVE9O95405 1425 aa4.46□□□□□ -1.7
LRRC28-218ENST00000560236 MYOM2P54296 1465 aa4.45□□□□□ -1.7
LRRC28-218ENST00000560236 CCDC154A6NI56 674 aa4.45□□□□□ -1.7
LRRC28-218ENST00000560236 PPP6CO00743 305 aa4.45□□□□□ -1.7
LRRC28-218ENST00000560236 MOSPD3O75425 235 aa4.45□□□□□ -1.7
LRRC28-218ENST00000560236 RPLP2P05387 115 aaKnown RBP4.45□□□□□ -1.7
LRRC28-218ENST00000560236 GJB1P08034 283 aa4.45□□□□□ -1.7
LRRC28-218ENST00000560236 VIL1P09327 827 aaKnown RBP4.45□□□□□ -1.7
LRRC28-218ENST00000560236 FAM163BP0C2L3 166 aa4.45□□□□□ -1.7
LRRC28-218ENST00000560236 CYP2D6P10635 497 aa4.45□□□□□ -1.7
LRRC28-218ENST00000560236 ITGALP20701 1170 aa4.45□□□□□ -1.7
LRRC28-218ENST00000560236 PROSER3Q2NL68 480 aa4.45□□□□□ -1.7
LRRC28-218ENST00000560236 TAF2Q6P1X5 1199 aa4.45□□□□□ -1.7
LRRC28-218ENST00000560236 SLC29A4Q7RTT9 530 aa4.45□□□□□ -1.7
LRRC28-218ENST00000560236 PSD4Q8NDX1 1056 aa4.45□□□□□ -1.7
LRRC28-218ENST00000560236 ATRIPQ8WXE1 791 aa4.45□□□□□ -1.7
LRRC28-218ENST00000560236 KAT5Q92993 513 aa4.45□□□□□ -1.7
LRRC28-218ENST00000560236 DMRTA2Q96SC8 542 aa4.45□□□□□ -1.7
LRRC28-218ENST00000560236 CNPPD1Q9BV87 410 aa4.45□□□□□ -1.7
LRRC28-218ENST00000560236 TMEM131LA2VDJ0 1609 aa4.45□□□□□ -1.7
LRRC28-218ENST00000560236 LMTK2Q8IWU2 1503 aa4.45□□□□□ -1.7
LRRC28-218ENST00000560236 RGPD3A6NKT7 1758 aaPredicted RBP4.45□□□□□ -1.7
LRRC28-218ENST00000560236 RGPD4Q7Z3J3 1758 aa4.45□□□□□ -1.7
LRRC28-218ENST00000560236 CROCC2H7BZ55 1655 aa4.45□□□□□ -1.7
LRRC28-218ENST00000560236 KANK1Q14678 1352 aa4.44□□□□□ -1.7
LRRC28-218ENST00000560236 ZNF785A8K8V0 405 aa4.44□□□□□ -1.7
LRRC28-218ENST00000560236 SMIM22K7EJ46 135 aa4.44□□□□□ -1.7
LRRC28-218ENST00000560236 F2RL2O00254 374 aa4.44□□□□□ -1.7
LRRC28-218ENST00000560236 SOAT2O75908 522 aa4.44□□□□□ -1.7
LRRC28-218ENST00000560236 CHEK2O96017 543 aa4.44□□□□□ -1.7
LRRC28-218ENST00000560236 GNAI3P08754 354 aa4.44□□□□□ -1.7
LRRC28-218ENST00000560236 JUPP14923 745 aa4.44□□□□□ -1.7
LRRC28-218ENST00000560236 MALP21145 153 aa4.44□□□□□ -1.7
LRRC28-218ENST00000560236 EDNRBP24530 442 aa4.44□□□□□ -1.7
LRRC28-218ENST00000560236 PCSK6P29122 969 aa4.44□□□□□ -1.7
LRRC28-218ENST00000560236 CD6P30203 668 aa4.44□□□□□ -1.7
LRRC28-218ENST00000560236 CYP2C19P33261 490 aa4.44□□□□□ -1.7
LRRC28-218ENST00000560236 CCT4P50991 539 aaKnown RBP4.44□□□□□ -1.7
LRRC28-218ENST00000560236 PRELPP51888 382 aa4.44□□□□□ -1.7
LRRC28-218ENST00000560236 ZNF135P52742 658 aaPredicted RBP4.44□□□□□ -1.7
LRRC28-218ENST00000560236 GNAI1P63096 354 aa4.44□□□□□ -1.7
LRRC28-218ENST00000560236 HABP2Q14520 560 aaPredicted RBP4.44□□□□□ -1.7
LRRC28-218ENST00000560236 SUPT20HL1Q3ZLR7 823 aa4.44□□□□□ -1.7
LRRC28-218ENST00000560236 CEP78Q5JTW2 689 aa4.44□□□□□ -1.7
LRRC28-218ENST00000560236 PRAMEF17Q5VTA0 474 aa4.44□□□□□ -1.7
LRRC28-218ENST00000560236 SLC18B1Q6NT16 456 aa4.44□□□□□ -1.7
LRRC28-218ENST00000560236 CNTD1Q8N815 330 aa4.44□□□□□ -1.7
LRRC28-218ENST00000560236 FANCBQ8NB91 859 aa4.44□□□□□ -1.7
LRRC28-218ENST00000560236 TBC1D5Q92609 795 aa4.44□□□□□ -1.7
LRRC28-218ENST00000560236 FAM136AQ96C01 138 aa4.44□□□□□ -1.7
LRRC28-218ENST00000560236 REPS1Q96D71 796 aa4.44□□□□□ -1.7
LRRC28-218ENST00000560236 VRK1Q99986 396 aaPredicted RBP4.44□□□□□ -1.7
LRRC28-218ENST00000560236 SH2D3AQ9BRG2 576 aa4.44□□□□□ -1.7
LRRC28-218ENST00000560236 QTRT1Q9BXR0 403 aaKnown RBP4.44□□□□□ -1.7
LRRC28-218ENST00000560236 GNL3LQ9NVN8 582 aaKnown RBP4.44□□□□□ -1.7
LRRC28-218ENST00000560236 RLIMQ9NVW2 624 aa4.44□□□□□ -1.7
LRRC28-218ENST00000560236 SIDT1Q9NXL6 827 aaKnown RBP4.44□□□□□ -1.7
LRRC28-218ENST00000560236 ETAA1Q9NY74 926 aa4.44□□□□□ -1.7
LRRC28-218ENST00000560236 CFAP97Q9P2B7 532 aa4.44□□□□□ -1.7
LRRC28-218ENST00000560236 NOS1P29475 1434 aa4.44□□□□□ -1.7
LRRC28-218ENST00000560236 ADAMTS13Q76LX8 1427 aa4.44□□□□□ -1.7
LRRC28-218ENST00000560236 ZNF644Q9H582 1327 aaPredicted RBP4.44□□□□□ -1.7
LRRC28-218ENST00000560236 UTRNP46939 3433 aa4.43□□□□□ -1.7
LRRC28-218ENST00000560236 USP32Q8NFA0 1604 aa4.43□□□□□ -1.7
LRRC28-218ENST00000560236 CASZ1Q86V15 1759 aa4.43□□□□□ -1.7
LRRC28-218ENST00000560236 KLHL33A6NCF5 533 aa4.43□□□□□ -1.7
LRRC28-218ENST00000560236 TISP43B9A030 160 aa4.43□□□□□ -1.7
LRRC28-218ENST00000560236 TRIM38O00635 465 aa4.43□□□□□ -1.7
LRRC28-218ENST00000560236 NHLRC4P0CG21 123 aaPredicted RBP4.43□□□□□ -1.7
LRRC28-218ENST00000560236 CHRM3P20309 590 aa4.43□□□□□ -1.7
LRRC28-218ENST00000560236 IARSP41252 1262 aaKnown RBP4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms