RNA–Protein interactions for RNA: ENST00000560207.1

RABGGTA-215, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 3

Gene RABGGTA, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-215ENST00000560207 CYP2F1P24903 491 aa12.78□□□□□ -0.36
RABGGTA-215ENST00000560207 CDC25CP30307 473 aa12.78□□□□□ -0.36
RABGGTA-215ENST00000560207 PDE6CP51160 858 aa12.78□□□□□ -0.36
RABGGTA-215ENST00000560207 ZNF132P52740 706 aa12.78□□□□□ -0.36
RABGGTA-215ENST00000560207 BCAT1P54687 386 aa12.78□□□□□ -0.36
RABGGTA-215ENST00000560207 SYCP1Q15431 976 aa12.78□□□□□ -0.36
RABGGTA-215ENST00000560207 TMC5Q6UXY8 1006 aa12.78□□□□□ -0.36
RABGGTA-215ENST00000560207 DENND5BQ6ZUT9 1274 aa12.78□□□□□ -0.36
RABGGTA-215ENST00000560207 CACNA2D4Q7Z3S7 1137 aa12.78□□□□□ -0.36
RABGGTA-215ENST00000560207 FAM35AQ86V20 835 aa12.78□□□□□ -0.36
RABGGTA-215ENST00000560207 ARHGEF19Q8IW93 802 aa12.78□□□□□ -0.36
RABGGTA-215ENST00000560207 FUKQ8N0W3 1084 aa12.78□□□□□ -0.36
RABGGTA-215ENST00000560207 ANKRD52Q8NB46 1076 aa12.78□□□□□ -0.36
RABGGTA-215ENST00000560207 RBBP8NLQ8NC74 664 aaPredicted RBP12.78□□□□□ -0.36
RABGGTA-215ENST00000560207 PDZD8Q8NEN9 1154 aa12.78□□□□□ -0.36
RABGGTA-215ENST00000560207 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.78□□□□□ -0.36
RABGGTA-215ENST00000560207 OVCA2Q8WZ82 227 aa12.78□□□□□ -0.36
RABGGTA-215ENST00000560207 ZNF707Q96C28 371 aaPredicted RBP12.78□□□□□ -0.36
RABGGTA-215ENST00000560207 MYRFLQ96LU7 910 aa12.78□□□□□ -0.36
RABGGTA-215ENST00000560207 KREMEN1Q96MU8 473 aa12.78□□□□□ -0.36
RABGGTA-215ENST00000560207 ASB2Q96Q27 587 aa12.78□□□□□ -0.36
RABGGTA-215ENST00000560207 GCNAQ96QF7 691 aa12.78□□□□□ -0.36
RABGGTA-215ENST00000560207 SPAG5Q96R06 1193 aa12.78□□□□□ -0.36
RABGGTA-215ENST00000560207 ARID3AQ99856 593 aa12.78□□□□□ -0.36
RABGGTA-215ENST00000560207 PHF7Q9BWX1 381 aaPredicted RBP12.78□□□□□ -0.36
RABGGTA-215ENST00000560207 LSM14BQ9BX40 385 aaKnown RBP12.78□□□□□ -0.36
RABGGTA-215ENST00000560207 DUSP16Q9BY84 665 aa12.78□□□□□ -0.36
RABGGTA-215ENST00000560207 B3GNT5Q9BYG0 378 aa12.78□□□□□ -0.36
RABGGTA-215ENST00000560207 FBXO44Q9H4M3 255 aa12.78□□□□□ -0.36
RABGGTA-215ENST00000560207 SIX2Q9NPC8 291 aa12.78□□□□□ -0.36
RABGGTA-215ENST00000560207 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.78□□□□□ -0.36
RABGGTA-215ENST00000560207 TMLHEQ9NVH6 421 aa12.78□□□□□ -0.36
RABGGTA-215ENST00000560207 SIK3Q9Y2K2 1263 aa12.78□□□□□ -0.36
RABGGTA-215ENST00000560207 USP15Q9Y4E8 981 aaPredicted RBP12.78□□□□□ -0.36
RABGGTA-215ENST00000560207 OBSL1O75147 1896 aa12.77□□□□□ -0.37
RABGGTA-215ENST00000560207 CCL16O15467 120 aa12.77□□□□□ -0.37
RABGGTA-215ENST00000560207 AP1G2O75843 785 aa12.77□□□□□ -0.37
RABGGTA-215ENST00000560207 NOL4O94818 638 aa12.77□□□□□ -0.37
RABGGTA-215ENST00000560207 VNN2O95498 520 aa12.77□□□□□ -0.37
RABGGTA-215ENST00000560207 SETSIPP0DME0 302 aa12.77□□□□□ -0.37
RABGGTA-215ENST00000560207 CD19P15391 556 aa12.77□□□□□ -0.37
RABGGTA-215ENST00000560207 NPR3P17342 541 aa12.77□□□□□ -0.37
RABGGTA-215ENST00000560207 DDX6P26196 483 aaKnown RBP eCLIP12.77□□□□□ -0.37
RABGGTA-215ENST00000560207 STAT1P42224 750 aa12.77□□□□□ -0.37
RABGGTA-215ENST00000560207 ARHGAP44Q17R89 818 aa12.77□□□□□ -0.37
RABGGTA-215ENST00000560207 ZNF394Q53GI3 561 aa12.77□□□□□ -0.37
RABGGTA-215ENST00000560207 ARHGAP15Q53QZ3 475 aa12.77□□□□□ -0.37
RABGGTA-215ENST00000560207 LCLAT1Q6UWP7 414 aa12.77□□□□□ -0.37
RABGGTA-215ENST00000560207 PDZD4Q76G19 769 aaPredicted RBP12.77□□□□□ -0.37
RABGGTA-215ENST00000560207 DNAJB7Q7Z6W7 309 aaPredicted RBP12.77□□□□□ -0.37
RABGGTA-215ENST00000560207 ZNF677Q86XU0 584 aa12.77□□□□□ -0.37
RABGGTA-215ENST00000560207 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.77□□□□□ -0.37
RABGGTA-215ENST00000560207 SCN4BQ8IWT1 228 aa12.77□□□□□ -0.37
RABGGTA-215ENST00000560207 FAM71AQ8IYT1 594 aa12.77□□□□□ -0.37
RABGGTA-215ENST00000560207 NUP93Q8N1F7 819 aa12.77□□□□□ -0.37
RABGGTA-215ENST00000560207 ZNF397Q8NF99 534 aaPredicted RBP12.77□□□□□ -0.37
RABGGTA-215ENST00000560207 SLC2A14Q8TDB8 520 aa12.77□□□□□ -0.37
RABGGTA-215ENST00000560207 NXPE3Q969Y0 559 aa12.77□□□□□ -0.37
RABGGTA-215ENST00000560207 NAA15Q9BXJ9 866 aaKnown RBP12.77□□□□□ -0.37
RABGGTA-215ENST00000560207 DPEP3Q9H4B8 488 aa12.77□□□□□ -0.37
RABGGTA-215ENST00000560207 CYLDQ9NQC7 956 aa12.77□□□□□ -0.37
RABGGTA-215ENST00000560207 GDE1Q9NZC3 331 aa12.77□□□□□ -0.37
RABGGTA-215ENST00000560207 SLC27A5Q9Y2P5 690 aa12.77□□□□□ -0.37
RABGGTA-215ENST00000560207 CEP83Q9Y592 693 aa12.77□□□□□ -0.37
RABGGTA-215ENST00000560207 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.77□□□□□ -0.37
RABGGTA-215ENST00000560207 NCANO14594 1321 aa12.77□□□□□ -0.37
RABGGTA-215ENST00000560207 NOTCH4Q99466 2003 aa12.76□□□□□ -0.37
RABGGTA-215ENST00000560207 TPM1P09493 284 aa12.76□□□□□ -0.37
RABGGTA-215ENST00000560207 FSHRP23945 695 aa12.76□□□□□ -0.37
RABGGTA-215ENST00000560207 GNA15P30679 374 aa12.76□□□□□ -0.37
RABGGTA-215ENST00000560207 USP8P40818 1118 aa12.76□□□□□ -0.37
RABGGTA-215ENST00000560207 PSEN1P49768 467 aa12.76□□□□□ -0.37
RABGGTA-215ENST00000560207 RBM10P98175 930 aaKnown RBP12.76□□□□□ -0.37
RABGGTA-215ENST00000560207 BST2Q10589 180 aaKnown RBP12.76□□□□□ -0.37
RABGGTA-215ENST00000560207 RAPGEF1Q13905 1077 aa12.76□□□□□ -0.37
RABGGTA-215ENST00000560207 TRIM14Q14142 442 aa12.76□□□□□ -0.37
RABGGTA-215ENST00000560207 DRAP1Q14919 205 aaPredicted RBP12.76□□□□□ -0.37
RABGGTA-215ENST00000560207 TJAP1Q5JTD0 557 aa12.76□□□□□ -0.37
RABGGTA-215ENST00000560207 PPP1R26Q5T8A7 1209 aaPredicted RBP12.76□□□□□ -0.37
RABGGTA-215ENST00000560207 PPP1R2P3Q6NXS1 205 aa12.76□□□□□ -0.37
RABGGTA-215ENST00000560207 SARM1Q6SZW1 724 aa12.76□□□□□ -0.37
RABGGTA-215ENST00000560207 C12orf76Q8N812 135 aaPredicted RBP12.76□□□□□ -0.37
RABGGTA-215ENST00000560207 C12orf29Q8N999 325 aa12.76□□□□□ -0.37
RABGGTA-215ENST00000560207 STK32AQ8WU08 396 aa12.76□□□□□ -0.37
RABGGTA-215ENST00000560207 E2F7Q96AV8 911 aa12.76□□□□□ -0.37
RABGGTA-215ENST00000560207 NOX5Q96PH1 765 aa12.76□□□□□ -0.37
RABGGTA-215ENST00000560207 SLITRK1Q96PX8 696 aa12.76□□□□□ -0.37
RABGGTA-215ENST00000560207 TWNKQ96RR1 684 aa12.76□□□□□ -0.37
RABGGTA-215ENST00000560207 MIS12Q9H081 205 aa12.76□□□□□ -0.37
RABGGTA-215ENST00000560207 KRT82Q9NSB4 513 aa12.76□□□□□ -0.37
RABGGTA-215ENST00000560207 FAM207AQ9NSI2 230 aaPredicted RBP12.76□□□□□ -0.37
RABGGTA-215ENST00000560207 HMGXB4Q9UGU5 601 aa12.76□□□□□ -0.37
RABGGTA-215ENST00000560207 NME7Q9Y5B8 376 aa12.76□□□□□ -0.37
RABGGTA-215ENST00000560207 ITIH6Q6UXX5 1313 aa12.76□□□□□ -0.37
RABGGTA-215ENST00000560207 NUP210Q8TEM1 1887 aaPredicted RBP12.76□□□□□ -0.37
RABGGTA-215ENST00000560207 ANAPC1Q9H1A4 1944 aa12.76□□□□□ -0.37
RABGGTA-215ENST00000560207 DOCK6Q96HP0 2047 aa12.76□□□□□ -0.37
RABGGTA-215ENST00000560207 DOCK8Q8NF50 2099 aa12.76□□□□□ -0.37
RABGGTA-215ENST00000560207 A0A1W2PQJ5 194 aa12.75□□□□□ -0.37
RABGGTA-215ENST00000560207 F8VP50 259 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms