RNA–Protein interactions for RNA: ENST00000559831.5

TPM1-221, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-221ENST00000559831 LHX5Q9H2C1 402 aa11.04□□□□□ -0.64
TPM1-221ENST00000559831 SYNCQ9H7C4 482 aa11.04□□□□□ -0.64
TPM1-221ENST00000559831 SLC28A3Q9HAS3 691 aa11.04□□□□□ -0.64
TPM1-221ENST00000559831 TLR9Q9NR96 1032 aa11.04□□□□□ -0.64
TPM1-221ENST00000559831 ST7Q9NRC1 585 aa11.04□□□□□ -0.64
TPM1-221ENST00000559831 NENFQ9UMX5 172 aa11.04□□□□□ -0.64
TPM1-221ENST00000559831 LZTS1Q9Y250 596 aa11.04□□□□□ -0.64
TPM1-221ENST00000559831 SSX2IPQ9Y2D8 614 aa11.04□□□□□ -0.64
TPM1-221ENST00000559831 ZKSCAN5Q9Y2L8 839 aa11.04□□□□□ -0.64
TPM1-221ENST00000559831 PPP2R2CQ9Y2T4 447 aa11.04□□□□□ -0.64
TPM1-221ENST00000559831 PCDHB5Q9Y5E4 795 aa11.04□□□□□ -0.64
TPM1-221ENST00000559831 MYO9BQ13459 2157 aa11.03□□□□□ -0.64
TPM1-221ENST00000559831 MTMR11A4FU01 709 aa11.03□□□□□ -0.64
TPM1-221ENST00000559831 TULP2O00295 520 aa11.03□□□□□ -0.64
TPM1-221ENST00000559831 PIK3R2O00459 728 aa11.03□□□□□ -0.64
TPM1-221ENST00000559831 GRM6O15303 877 aa11.03□□□□□ -0.64
TPM1-221ENST00000559831 H2AFZP0C0S5 128 aa11.03□□□□□ -0.64
TPM1-221ENST00000559831 SETSIPP0DME0 302 aa11.03□□□□□ -0.64
TPM1-221ENST00000559831 GZMAP12544 262 aa11.03□□□□□ -0.64
TPM1-221ENST00000559831 NPR3P17342 541 aa11.03□□□□□ -0.64
TPM1-221ENST00000559831 ABCB4P21439 1286 aa11.03□□□□□ -0.64
TPM1-221ENST00000559831 CYP2F1P24903 491 aa11.03□□□□□ -0.64
TPM1-221ENST00000559831 DNAJB1P25685 340 aa11.03□□□□□ -0.64
TPM1-221ENST00000559831 CDH5P33151 784 aaPredicted RBP11.03□□□□□ -0.64
TPM1-221ENST00000559831 VAV2P52735 878 aa11.03□□□□□ -0.64
TPM1-221ENST00000559831 ERVFC1P60507 584 aa11.03□□□□□ -0.64
TPM1-221ENST00000559831 ROR1Q01973 937 aa11.03□□□□□ -0.64
TPM1-221ENST00000559831 CREMQ03060 361 aa11.03□□□□□ -0.64
TPM1-221ENST00000559831 CENPCQ03188 943 aa11.03□□□□□ -0.64
TPM1-221ENST00000559831 UBE3AQ05086 875 aa11.03□□□□□ -0.64
TPM1-221ENST00000559831 GPR17Q13304 367 aa11.03□□□□□ -0.64
TPM1-221ENST00000559831 SMC1AQ14683 1233 aaKnown RBP11.03□□□□□ -0.64
TPM1-221ENST00000559831 PKDCCQ504Y2 493 aa11.03□□□□□ -0.64
TPM1-221ENST00000559831 C2CD6Q53TS8 623 aa11.03□□□□□ -0.64
TPM1-221ENST00000559831 C10orf76Q5T2E6 689 aa11.03□□□□□ -0.64
TPM1-221ENST00000559831 RNF19BQ6ZMZ0 732 aa11.03□□□□□ -0.64
TPM1-221ENST00000559831 MMS22LQ6ZRQ5 1243 aa11.03□□□□□ -0.64
TPM1-221ENST00000559831 H2AFVQ71UI9 128 aa11.03□□□□□ -0.64
TPM1-221ENST00000559831 PHLDB2Q86SQ0 1253 aa11.03□□□□□ -0.64
TPM1-221ENST00000559831 ERICH1Q86X53 443 aa11.03□□□□□ -0.64
TPM1-221ENST00000559831 C17orf53Q8N3J3 647 aaPredicted RBP11.03□□□□□ -0.64
TPM1-221ENST00000559831 WDTC1Q8N5D0 677 aa11.03□□□□□ -0.64
TPM1-221ENST00000559831 MSANTD4Q8NCY6 345 aa11.03□□□□□ -0.64
TPM1-221ENST00000559831 MICAL1Q8TDZ2 1067 aa11.03□□□□□ -0.64
TPM1-221ENST00000559831 TIFAQ96CG3 184 aa11.03□□□□□ -0.64
TPM1-221ENST00000559831 ZNF653Q96CK0 615 aa11.03□□□□□ -0.64
TPM1-221ENST00000559831 CLSTN3Q9BQT9 956 aa11.03□□□□□ -0.64
TPM1-221ENST00000559831 DUSP16Q9BY84 665 aa11.03□□□□□ -0.64
TPM1-221ENST00000559831 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.03□□□□□ -0.64
TPM1-221ENST00000559831 TRMT1Q9NXH9 659 aaKnown RBP11.03□□□□□ -0.64
TPM1-221ENST00000559831 ADAM22Q9P0K1 906 aa11.03□□□□□ -0.64
TPM1-221ENST00000559831 CYTH4Q9UIA0 394 aa11.03□□□□□ -0.64
TPM1-221ENST00000559831 TFR2Q9UP52 801 aa11.03□□□□□ -0.64
TPM1-221ENST00000559831 PCDHGC5Q9Y5F6 944 aa11.03□□□□□ -0.64
TPM1-221ENST00000559831 MTCL1Q9Y4B5 1905 aaKnown RBP11.03□□□□□ -0.64
TPM1-221ENST00000559831 GREB1Q4ZG55 1949 aa11.02□□□□□ -0.65
TPM1-221ENST00000559831 A0A0U1RQJ8 604 aa11.02□□□□□ -0.65
TPM1-221ENST00000559831 WDR27A2RRH5 827 aa11.02□□□□□ -0.65
TPM1-221ENST00000559831 USP27XA6NNY8 438 aa11.02□□□□□ -0.65
TPM1-221ENST00000559831 H3BNC9 293 aa11.02□□□□□ -0.65
TPM1-221ENST00000559831 XPO1O14980 1071 aaKnown RBP11.02□□□□□ -0.65
TPM1-221ENST00000559831 ZSCAN12O43309 604 aa11.02□□□□□ -0.65
TPM1-221ENST00000559831 ATMINO43313 823 aaPredicted RBP11.02□□□□□ -0.65
TPM1-221ENST00000559831 BEST1O76090 585 aa11.02□□□□□ -0.65
TPM1-221ENST00000559831 GRIK1P39086 918 aa11.02□□□□□ -0.65
TPM1-221ENST00000559831 GPD2P43304 727 aa11.02□□□□□ -0.65
TPM1-221ENST00000559831 NDUFV1P49821 464 aa11.02□□□□□ -0.65
TPM1-221ENST00000559831 CACNA2D1P54289 1103 aa11.02□□□□□ -0.65
TPM1-221ENST00000559831 GALCP54803 685 aa11.02□□□□□ -0.65
TPM1-221ENST00000559831 SMAD3P84022 425 aaKnown RBP11.02□□□□□ -0.65
TPM1-221ENST00000559831 PDCLQ13371 301 aa11.02□□□□□ -0.65
TPM1-221ENST00000559831 PTPN20Q4JDL3 420 aa11.02□□□□□ -0.65
TPM1-221ENST00000559831 CYP4A22Q5TCH4 519 aa11.02□□□□□ -0.65
TPM1-221ENST00000559831 SLC8B1Q6J4K2 584 aa11.02□□□□□ -0.65
TPM1-221ENST00000559831 PPP1R2P3Q6NXS1 205 aa11.02□□□□□ -0.65
TPM1-221ENST00000559831 CLEC20AQ6ZU45 233 aa11.02□□□□□ -0.65
TPM1-221ENST00000559831 MON1BQ7L1V2 547 aa11.02□□□□□ -0.65
TPM1-221ENST00000559831 PHF13Q86YI8 300 aaPredicted RBP11.02□□□□□ -0.65
TPM1-221ENST00000559831 SCN4BQ8IWT1 228 aa11.02□□□□□ -0.65
TPM1-221ENST00000559831 MCOLN2Q8IZK6 566 aa11.02□□□□□ -0.65
TPM1-221ENST00000559831 TXLNBQ8N3L3 684 aa11.02□□□□□ -0.65
TPM1-221ENST00000559831 ATAD1Q8NBU5 361 aa11.02□□□□□ -0.65
TPM1-221ENST00000559831 SPPL2BQ8TCT7 592 aa11.02□□□□□ -0.65
TPM1-221ENST00000559831 IPO4Q8TEX9 1081 aaKnown RBP11.02□□□□□ -0.65
TPM1-221ENST00000559831 GDPD5Q8WTR4 605 aa11.02□□□□□ -0.65
TPM1-221ENST00000559831 ATRIPQ8WXE1 791 aa11.02□□□□□ -0.65
TPM1-221ENST00000559831 CTNNBL1Q8WYA6 563 aaPredicted RBP11.02□□□□□ -0.65
TPM1-221ENST00000559831 PPP1R13BQ96KQ4 1090 aa11.02□□□□□ -0.65
TPM1-221ENST00000559831 SEPT5Q99719 369 aaPredicted RBP11.02□□□□□ -0.65
TPM1-221ENST00000559831 SMOQ99835 787 aa11.02□□□□□ -0.65
TPM1-221ENST00000559831 EMILIN2Q9BXX0 1053 aa11.02□□□□□ -0.65
TPM1-221ENST00000559831 ISCUQ9H1K1 167 aa11.02□□□□□ -0.65
TPM1-221ENST00000559831 DMAP1Q9NPF5 467 aaPredicted RBP11.02□□□□□ -0.65
TPM1-221ENST00000559831 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.02□□□□□ -0.65
TPM1-221ENST00000559831 FNIP2Q9P278 1114 aa11.02□□□□□ -0.65
TPM1-221ENST00000559831 MYO1AQ9UBC5 1043 aa11.02□□□□□ -0.65
TPM1-221ENST00000559831 SLC27A5Q9Y2P5 690 aa11.02□□□□□ -0.65
TPM1-221ENST00000559831 ZNF638Q14966 1978 aaKnown RBP11.02□□□□□ -0.65
TPM1-221ENST00000559831 MYO7AQ13402 2215 aa11.01□□□□□ -0.65
TPM1-221ENST00000559831 ANKRD62A6NC57 917 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 199 ms