RNA–Protein interactions for RNA: ENST00000559711.5

USP3-213, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 1,693 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-213ENST00000559711 SPATA18Q8TC71 538 aa13.37□□□□□ -0.27
USP3-213ENST00000559711 MAIP1Q8WWC4 291 aa13.37□□□□□ -0.27
USP3-213ENST00000559711 HSFY1Q96LI6 401 aa13.37□□□□□ -0.27
USP3-213ENST00000559711 HINFPQ9BQA5 517 aa13.37□□□□□ -0.27
USP3-213ENST00000559711 PAAF1Q9BRP4 392 aa13.37□□□□□ -0.27
USP3-213ENST00000559711 EPB41L5Q9HCM4 733 aa13.37□□□□□ -0.27
USP3-213ENST00000559711 AMACRQ9UHK6 382 aa13.37□□□□□ -0.27
USP3-213ENST00000559711 CEP350Q5VT06 3117 aa13.36□□□□□ -0.27
USP3-213ENST00000559711 TCRBV7S2A1N4TA0A589 114 aa13.36□□□□□ -0.27
USP3-213ENST00000559711 PITPNM1O00562 1244 aa13.36□□□□□ -0.27
USP3-213ENST00000559711 PHF2O75151 1096 aa13.36□□□□□ -0.27
USP3-213ENST00000559711 COL6A1P12109 1028 aa13.36□□□□□ -0.27
USP3-213ENST00000559711 CCL5P13501 91 aa13.36□□□□□ -0.27
USP3-213ENST00000559711 TCF4P15884 667 aa13.36□□□□□ -0.27
USP3-213ENST00000559711 CHRNA3P32297 505 aa13.36□□□□□ -0.27
USP3-213ENST00000559711 RGS7P49802 495 aa13.36□□□□□ -0.27
USP3-213ENST00000559711 GPNMBQ14956 572 aa13.36□□□□□ -0.27
USP3-213ENST00000559711 TIGD5Q53EQ6 642 aa13.36□□□□□ -0.27
USP3-213ENST00000559711 FAM102AQ5T9C2 384 aaPredicted RBP13.36□□□□□ -0.27
USP3-213ENST00000559711 OR6B2Q6IFH4 312 aa13.36□□□□□ -0.27
USP3-213ENST00000559711 OLFML1Q6UWY5 402 aa13.36□□□□□ -0.27
USP3-213ENST00000559711 CD300LGQ6UXG3 332 aa13.36□□□□□ -0.27
USP3-213ENST00000559711 DSTYKQ6XUX3 929 aa13.36□□□□□ -0.27
USP3-213ENST00000559711 FAM183BPQ6ZVS7 135 aa13.36□□□□□ -0.27
USP3-213ENST00000559711 ARFGAP1Q8N6T3 406 aa13.36□□□□□ -0.27
USP3-213ENST00000559711 C12orf50Q8NA57 414 aaPredicted RBP13.36□□□□□ -0.27
USP3-213ENST00000559711 SLC2A14Q8TDB8 520 aa13.36□□□□□ -0.27
USP3-213ENST00000559711 AENQ8WTP8 325 aaKnown RBP13.36□□□□□ -0.27
USP3-213ENST00000559711 SEC14L1Q92503 715 aa13.36□□□□□ -0.27
USP3-213ENST00000559711 PCYOX1Q9UHG3 505 aa13.36□□□□□ -0.27
USP3-213ENST00000559711 C2CD4BA6NLJ0 364 aa13.35□□□□□ -0.27
USP3-213ENST00000559711 PAPSS1O43252 624 aaPredicted RBP13.35□□□□□ -0.27
USP3-213ENST00000559711 LRCH4O75427 683 aa13.35□□□□□ -0.27
USP3-213ENST00000559711 SASH3O75995 380 aa13.35□□□□□ -0.27
USP3-213ENST00000559711 CYP11A1P05108 521 aa13.35□□□□□ -0.27
USP3-213ENST00000559711 ADORA2BP29275 332 aa13.35□□□□□ -0.27
USP3-213ENST00000559711 SCNN1AP37088 669 aa13.35□□□□□ -0.27
USP3-213ENST00000559711 SSR1P43307 286 aaKnown RBP13.35□□□□□ -0.27
USP3-213ENST00000559711 PLA2G4AP47712 749 aa13.35□□□□□ -0.27
USP3-213ENST00000559711 ZNF143P52747 638 aaPredicted RBP13.35□□□□□ -0.27
USP3-213ENST00000559711 COPS2P61201 443 aa13.35□□□□□ -0.27
USP3-213ENST00000559711 SLC6A3Q01959 620 aa13.35□□□□□ -0.27
USP3-213ENST00000559711 DHX34Q14147 1143 aaKnown RBP13.35□□□□□ -0.27
USP3-213ENST00000559711 KIAA0319Q5VV43 1072 aa13.35□□□□□ -0.27
USP3-213ENST00000559711 DCLRE1AQ6PJP8 1040 aa13.35□□□□□ -0.27
USP3-213ENST00000559711 GLB1LQ6UWU2 654 aa13.35□□□□□ -0.27
USP3-213ENST00000559711 PAQR9Q6ZVX9 377 aa13.35□□□□□ -0.27
USP3-213ENST00000559711 HDXQ7Z353 690 aa13.35□□□□□ -0.27
USP3-213ENST00000559711 FUKQ8N0W3 1084 aa13.35□□□□□ -0.27
USP3-213ENST00000559711 EMC1Q8N766 993 aa13.35□□□□□ -0.27
USP3-213ENST00000559711 KHSRPQ92945 711 aaKnown RBP eCLIP13.35□□□□□ -0.273e-7■■■□□ 15.5
USP3-213ENST00000559711 MAGOHBQ96A72 148 aaKnown RBP13.35□□□□□ -0.27
USP3-213ENST00000559711 RUNDC3BQ96NL0 473 aa13.35□□□□□ -0.27
USP3-213ENST00000559711 DUSP16Q9BY84 665 aa13.35□□□□□ -0.27
USP3-213ENST00000559711 RNF208Q9H0X6 261 aa13.35□□□□□ -0.27
USP3-213ENST00000559711 LRRC19Q9H756 370 aa13.35□□□□□ -0.27
USP3-213ENST00000559711 WBP1LQ9NX94 342 aa13.35□□□□□ -0.27
USP3-213ENST00000559711 DDX43Q9NXZ2 648 aaKnown RBP13.35□□□□□ -0.27
USP3-213ENST00000559711 DDX56Q9NY93 547 aaKnown RBP13.35□□□□□ -0.27
USP3-213ENST00000559711 FAM187AA6NFU0 413 aa13.34□□□□□ -0.27
USP3-213ENST00000559711 ZSCAN5CA6NGD5 496 aaPredicted RBP13.34□□□□□ -0.27
USP3-213ENST00000559711 M0QZQ0 153 aa13.34□□□□□ -0.27
USP3-213ENST00000559711 XPO1O14980 1071 aaKnown RBP13.34□□□□□ -0.27
USP3-213ENST00000559711 TTI1O43156 1089 aa13.34□□□□□ -0.27
USP3-213ENST00000559711 NBNO60934 754 aa13.34□□□□□ -0.27
USP3-213ENST00000559711 ATP2C2O75185 946 aa13.34□□□□□ -0.27
USP3-213ENST00000559711 B3GAT3O94766 335 aa13.34□□□□□ -0.27
USP3-213ENST00000559711 TKTP29401 623 aaKnown RBP13.34□□□□□ -0.27
USP3-213ENST00000559711 PTPN7P35236 360 aa13.34□□□□□ -0.27
USP3-213ENST00000559711 PCK1P35558 622 aa13.34□□□□□ -0.27
USP3-213ENST00000559711 ACADSBP45954 432 aa13.34□□□□□ -0.27
USP3-213ENST00000559711 FNTAP49354 379 aa13.34□□□□□ -0.27
USP3-213ENST00000559711 CARSP49589 748 aaKnown RBP13.34□□□□□ -0.27
USP3-213ENST00000559711 PLCB3Q01970 1234 aa13.34□□□□□ -0.27
USP3-213ENST00000559711 SLC25A11Q02978 314 aaKnown RBP13.34□□□□□ -0.27
USP3-213ENST00000559711 KLF1Q13351 362 aaPredicted RBP13.34□□□□□ -0.27
USP3-213ENST00000559711 ATP13A4Q4VNC1 1196 aa13.34□□□□□ -0.27
USP3-213ENST00000559711 PLEKHG4Q58EX7 1191 aa13.34□□□□□ -0.27
USP3-213ENST00000559711 ARCQ7LC44 396 aa13.34□□□□□ -0.27
USP3-213ENST00000559711 CASKIN2Q8WXE0 1202 aa13.34□□□□□ -0.27
USP3-213ENST00000559711 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.34□□□□□ -0.27
USP3-213ENST00000559711 RBM41Q96IZ5 413 aaKnown RBP13.34□□□□□ -0.27
USP3-213ENST00000559711 HERPUD2Q9BSE4 406 aa13.34□□□□□ -0.27
USP3-213ENST00000559711 CNPY3Q9BT09 278 aa13.34□□□□□ -0.27
USP3-213ENST00000559711 OSBPL8Q9BZF1 889 aa13.34□□□□□ -0.27
USP3-213ENST00000559711 ASNSD1Q9NWL6 643 aa13.34□□□□□ -0.27
USP3-213ENST00000559711 INPP5FQ9Y2H2 1132 aa13.34□□□□□ -0.27
USP3-213ENST00000559711 BRCA2P51587 3418 aa13.34□□□□□ -0.27
USP3-213ENST00000559711 PIK3R2O00459 728 aa13.34□□□□□ -0.27
USP3-213ENST00000559711 DPYSL4O14531 572 aa13.34□□□□□ -0.27
USP3-213ENST00000559711 KRT7P08729 469 aa13.34□□□□□ -0.27
USP3-213ENST00000559711 RALAP11233 206 aa13.34□□□□□ -0.27
USP3-213ENST00000559711 ODC1P11926 461 aa13.34□□□□□ -0.27
USP3-213ENST00000559711 PDGFRAP16234 1089 aa13.34□□□□□ -0.27
USP3-213ENST00000559711 GPD1P21695 349 aa13.34□□□□□ -0.27
USP3-213ENST00000559711 IBSPP21815 317 aaPredicted RBP13.34□□□□□ -0.27
USP3-213ENST00000559711 ACAT1P24752 427 aaKnown RBP13.34□□□□□ -0.27
USP3-213ENST00000559711 COILP38432 576 aaPredicted RBP13.34□□□□□ -0.27
USP3-213ENST00000559711 CETN2P41208 172 aa13.34□□□□□ -0.27
USP3-213ENST00000559711 PTGIRP43119 386 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms