RNA–Protein interactions for RNA: ENST00000559347.1

SPG11-216, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 716 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-216ENST00000559347 TRIM49BA6NDI0 452 aa11.67□□□□□ -0.54
SPG11-216ENST00000559347 SHISA7A6NL88 538 aa11.67□□□□□ -0.54
SPG11-216ENST00000559347 EPB41P11171 864 aaKnown RBP11.67□□□□□ -0.54
SPG11-216ENST00000559347 PTPN1P18031 435 aaKnown RBP11.67□□□□□ -0.54
SPG11-216ENST00000559347 DDX6P26196 483 aaKnown RBP eCLIP11.67□□□□□ -0.54
SPG11-216ENST00000559347 GDI1P31150 447 aa11.67□□□□□ -0.54
SPG11-216ENST00000559347 GCLMP48507 274 aa11.67□□□□□ -0.54
SPG11-216ENST00000559347 PMS1P54277 932 aaKnown RBP11.67□□□□□ -0.54
SPG11-216ENST00000559347 CACNA2D1P54289 1103 aa11.67□□□□□ -0.54
SPG11-216ENST00000559347 NOP14P78316 857 aaKnown RBP11.67□□□□□ -0.54
SPG11-216ENST00000559347 LRRC63Q05C16 580 aa11.67□□□□□ -0.54
SPG11-216ENST00000559347 SGSM1Q2NKQ1 1148 aa11.67□□□□□ -0.54
SPG11-216ENST00000559347 SLC44A4Q53GD3 710 aa11.67□□□□□ -0.54
SPG11-216ENST00000559347 SPOPLQ6IQ16 392 aa11.67□□□□□ -0.54
SPG11-216ENST00000559347 TPRG1Q6ZUI0 275 aa11.67□□□□□ -0.54
SPG11-216ENST00000559347 ADSSL1Q8N142 457 aa11.67□□□□□ -0.54
SPG11-216ENST00000559347 TAS1R2Q8TE23 839 aa11.67□□□□□ -0.54
SPG11-216ENST00000559347 IRF7Q92985 503 aa11.67□□□□□ -0.54
SPG11-216ENST00000559347 EEF2KMTQ96G04 330 aa11.67□□□□□ -0.54
SPG11-216ENST00000559347 SHDQ96IW2 340 aa11.67□□□□□ -0.54
SPG11-216ENST00000559347 SPATA17Q96L03 361 aa11.67□□□□□ -0.54
SPG11-216ENST00000559347 CEP295NLQ96MC4 621 aa11.67□□□□□ -0.54
SPG11-216ENST00000559347 TSG101Q99816 390 aa11.67□□□□□ -0.54
SPG11-216ENST00000559347 SLC46A2Q9BY10 475 aa11.67□□□□□ -0.54
SPG11-216ENST00000559347 GTPBP4Q9BZE4 634 aaKnown RBP11.67□□□□□ -0.54
SPG11-216ENST00000559347 IMPG2Q9BZV3 1241 aa11.67□□□□□ -0.54
SPG11-216ENST00000559347 ZNF518BQ9C0D4 1074 aa11.67□□□□□ -0.54
SPG11-216ENST00000559347 ELOVL4Q9GZR5 314 aa11.67□□□□□ -0.54
SPG11-216ENST00000559347 MMRN2Q9H8L6 949 aa11.67□□□□□ -0.54
SPG11-216ENST00000559347 TMEM8AQ9HCN3 771 aa11.67□□□□□ -0.54
SPG11-216ENST00000559347 TRPV5Q9NQA5 729 aa11.67□□□□□ -0.54
SPG11-216ENST00000559347 TMEM30AQ9NV96 361 aa11.67□□□□□ -0.54
SPG11-216ENST00000559347 OBP2AQ9NY56 170 aa11.67□□□□□ -0.54
SPG11-216ENST00000559347 CHMP5Q9NZZ3 219 aa11.67□□□□□ -0.54
SPG11-216ENST00000559347 DLGAP2Q9P1A6 1054 aa11.67□□□□□ -0.54
SPG11-216ENST00000559347 HMGXB4Q9UGU5 601 aa11.67□□□□□ -0.54
SPG11-216ENST00000559347 ZMYM5Q9UJ78 669 aa11.67□□□□□ -0.54
SPG11-216ENST00000559347 MAN1B1Q9UKM7 699 aa11.67□□□□□ -0.54
SPG11-216ENST00000559347 WDR87Q6ZQQ6 2873 aa11.67□□□□□ -0.54
SPG11-216ENST00000559347 KANSL1LA0AUZ9 987 aa11.66□□□□□ -0.54
SPG11-216ENST00000559347 F8VP50 259 aa11.66□□□□□ -0.54
SPG11-216ENST00000559347 STK25O00506 426 aa11.66□□□□□ -0.54
SPG11-216ENST00000559347 TRIM66O15016 1216 aa11.66□□□□□ -0.54
SPG11-216ENST00000559347 CETN3O15182 167 aa11.66□□□□□ -0.54
SPG11-216ENST00000559347 SLC16A3O15427 465 aaKnown RBP11.66□□□□□ -0.54
SPG11-216ENST00000559347 LRRN2O75325 713 aa11.66□□□□□ -0.54
SPG11-216ENST00000559347 P4HA1P13674 534 aa11.66□□□□□ -0.54
SPG11-216ENST00000559347 GLULP15104 373 aa11.66□□□□□ -0.54
SPG11-216ENST00000559347 ANXA13P27216 316 aa11.66□□□□□ -0.54
SPG11-216ENST00000559347 MXI1P50539 228 aa11.66□□□□□ -0.54
SPG11-216ENST00000559347 DENND5BQ6ZUT9 1274 aa11.66□□□□□ -0.54
SPG11-216ENST00000559347 FAM35AQ86V20 835 aa11.66□□□□□ -0.54
SPG11-216ENST00000559347 CMTM8Q8IZV2 173 aa11.66□□□□□ -0.54
SPG11-216ENST00000559347 MAB21L3Q8N8X9 362 aa11.66□□□□□ -0.54
SPG11-216ENST00000559347 DTWD2Q8NBA8 298 aa11.66□□□□□ -0.54
SPG11-216ENST00000559347 MRPS31Q92665 395 aaKnown RBP11.66□□□□□ -0.54
SPG11-216ENST00000559347 TNIP3Q96KP6 325 aa11.66□□□□□ -0.54
SPG11-216ENST00000559347 LRRC3BQ96PB8 259 aa11.66□□□□□ -0.54
SPG11-216ENST00000559347 TTLL2Q9BWV7 592 aa11.66□□□□□ -0.54
SPG11-216ENST00000559347 BCO2Q9BYV7 579 aa11.66□□□□□ -0.54
SPG11-216ENST00000559347 NIF3L1Q9GZT8 377 aa11.66□□□□□ -0.54
SPG11-216ENST00000559347 SMG9Q9H0W8 520 aaKnown RBP11.66□□□□□ -0.54
SPG11-216ENST00000559347 KIF9Q9HAQ2 790 aa11.66□□□□□ -0.54
SPG11-216ENST00000559347 LTB4R2Q9NPC1 389 aa11.66□□□□□ -0.54
SPG11-216ENST00000559347 SIT1Q9Y3P8 196 aa11.66□□□□□ -0.54
SPG11-216ENST00000559347 PIEZO1Q92508 2521 aa11.65□□□□□ -0.54
SPG11-216ENST00000559347 SOBPA7XYQ1 873 aa11.65□□□□□ -0.54
SPG11-216ENST00000559347 H0Y858 1186 aa11.65□□□□□ -0.54
SPG11-216ENST00000559347 HAX1O00165 279 aa11.65□□□□□ -0.54
SPG11-216ENST00000559347 CLDN5O00501 218 aa11.65□□□□□ -0.54
SPG11-216ENST00000559347 DPYSL4O14531 572 aa11.65□□□□□ -0.54
SPG11-216ENST00000559347 PSMA7O14818 248 aa11.65□□□□□ -0.54
SPG11-216ENST00000559347 ZNF263O14978 683 aa11.65□□□□□ -0.54
SPG11-216ENST00000559347 CHADO15335 359 aa11.65□□□□□ -0.54
SPG11-216ENST00000559347 DCNP07585 359 aaKnown RBP11.65□□□□□ -0.54
SPG11-216ENST00000559347 CD44P16070 742 aaKnown RBP11.65□□□□□ -0.54
SPG11-216ENST00000559347 CD72P21854 359 aa11.65□□□□□ -0.54
SPG11-216ENST00000559347 BMP6P22004 513 aa11.65□□□□□ -0.54
SPG11-216ENST00000559347 CCNE1P24864 410 aa11.65□□□□□ -0.54
SPG11-216ENST00000559347 GTF2H1P32780 548 aa11.65□□□□□ -0.54
SPG11-216ENST00000559347 AVPR1AP37288 418 aa11.65□□□□□ -0.54
SPG11-216ENST00000559347 GRIK1P39086 918 aa11.65□□□□□ -0.54
SPG11-216ENST00000559347 ANP32AP39687 249 aaKnown RBP11.65□□□□□ -0.54
SPG11-216ENST00000559347 NDST1P52848 882 aa11.65□□□□□ -0.54
SPG11-216ENST00000559347 USP46P62068 366 aa11.65□□□□□ -0.54
SPG11-216ENST00000559347 UBE2HP62256 183 aa11.65□□□□□ -0.54
SPG11-216ENST00000559347 FKBP3Q00688 224 aaKnown RBP11.65□□□□□ -0.54
SPG11-216ENST00000559347 INCA1Q0VD86 236 aa11.65□□□□□ -0.54
SPG11-216ENST00000559347 STIM1Q13586 685 aa11.65□□□□□ -0.54
SPG11-216ENST00000559347 UBXN2BQ14CS0 331 aa11.65□□□□□ -0.54
SPG11-216ENST00000559347 ARHGAP29Q52LW3 1261 aa11.65□□□□□ -0.54
SPG11-216ENST00000559347 KRT39Q6A163 491 aa11.65□□□□□ -0.54
SPG11-216ENST00000559347 TXNDC8Q6A555 127 aa11.65□□□□□ -0.54
SPG11-216ENST00000559347 ANKRD40Q6AI12 368 aa11.65□□□□□ -0.54
SPG11-216ENST00000559347 ISM2Q6H9L7 571 aa11.65□□□□□ -0.54
SPG11-216ENST00000559347 GPIHBP1Q8IV16 184 aa11.65□□□□□ -0.54
SPG11-216ENST00000559347 YAF2Q8IY57 180 aa11.65□□□□□ -0.54
SPG11-216ENST00000559347 BPIFB1Q8TDL5 484 aa11.65□□□□□ -0.54
SPG11-216ENST00000559347 USP13Q92995 863 aaPredicted RBP11.65□□□□□ -0.54
SPG11-216ENST00000559347 C8orf48Q96LL4 319 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms