RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 CFAP221Q4G0U5 840 aa19.12■□□□□ 0.65
CLPX-203ENST00000558958 CLEC20AQ6ZU45 233 aa19.12■□□□□ 0.65
CLPX-203ENST00000558958 H2AFVQ71UI9 128 aa19.12■□□□□ 0.65
CLPX-203ENST00000558958 SPATA2LQ8IUW3 424 aaPredicted RBP19.12■□□□□ 0.65
CLPX-203ENST00000558958 POF1BQ8WVV4 589 aa19.12■□□□□ 0.65
CLPX-203ENST00000558958 SMARCD1Q96GM5 515 aa19.12■□□□□ 0.65
CLPX-203ENST00000558958 FUBP3Q96I24 572 aaKnown RBP eCLIP19.12■□□□□ 0.65
CLPX-203ENST00000558958 PACSIN1Q9BY11 444 aa19.12■□□□□ 0.65
CLPX-203ENST00000558958 RXFP1Q9HBX9 757 aa19.12■□□□□ 0.65
CLPX-203ENST00000558958 FNIP2Q9P278 1114 aa19.12■□□□□ 0.65
CLPX-203ENST00000558958 INTUQ9ULD6 942 aa19.12■□□□□ 0.65
CLPX-203ENST00000558958 LAMA3Q16787 3333 aa19.11■□□□□ 0.65
CLPX-203ENST00000558958 RCCD1A6NED2 376 aa19.11■□□□□ 0.65
CLPX-203ENST00000558958 AP1G2O75843 785 aa19.11■□□□□ 0.65
CLPX-203ENST00000558958 FAM200BP0CF97 657 aa19.11■□□□□ 0.65
CLPX-203ENST00000558958 NPR3P17342 541 aa19.11■□□□□ 0.65
CLPX-203ENST00000558958 MMP8P22894 467 aa19.11■□□□□ 0.65
CLPX-203ENST00000558958 BDNFP23560 247 aa19.11■□□□□ 0.65
CLPX-203ENST00000558958 GALCP54803 685 aa19.11■□□□□ 0.65
CLPX-203ENST00000558958 ERVFC1P60507 584 aa19.11■□□□□ 0.65
CLPX-203ENST00000558958 ROR1Q01973 937 aa19.11■□□□□ 0.65
CLPX-203ENST00000558958 CREMQ03060 361 aa19.11■□□□□ 0.65
CLPX-203ENST00000558958 PDCLQ13371 301 aa19.11■□□□□ 0.65
CLPX-203ENST00000558958 PPP2R2DQ66LE6 453 aa19.11■□□□□ 0.65
CLPX-203ENST00000558958 MON1BQ7L1V2 547 aa19.11■□□□□ 0.65
CLPX-203ENST00000558958 TMC7Q7Z402 723 aa19.11■□□□□ 0.65
CLPX-203ENST00000558958 KIAA1328Q86T90 577 aa19.11■□□□□ 0.65
CLPX-203ENST00000558958 MCOLN2Q8IZK6 566 aa19.11■□□□□ 0.65
CLPX-203ENST00000558958 STK32AQ8WU08 396 aa19.11■□□□□ 0.65
CLPX-203ENST00000558958 NOX5Q96PH1 765 aa19.11■□□□□ 0.65
CLPX-203ENST00000558958 SMOQ99835 787 aa19.11■□□□□ 0.65
CLPX-203ENST00000558958 RHOBTB2Q9BYZ6 727 aa19.11■□□□□ 0.65
CLPX-203ENST00000558958 CSNK1G1Q9HCP0 422 aa19.11■□□□□ 0.65
CLPX-203ENST00000558958 KCND1Q9NSA2 647 aa19.11■□□□□ 0.65
CLPX-203ENST00000558958 TMEM30AQ9NV96 361 aa19.11■□□□□ 0.65
CLPX-203ENST00000558958 PCDHB5Q9Y5E4 795 aa19.11■□□□□ 0.65
CLPX-203ENST00000558958 IRAK3Q9Y616 596 aa19.11■□□□□ 0.65
CLPX-203ENST00000558958 A0A0U1RQJ8 604 aa19.1■□□□□ 0.65
CLPX-203ENST00000558958 WDR27A2RRH5 827 aa19.1■□□□□ 0.65
CLPX-203ENST00000558958 ANKRD62A6NC57 917 aa19.1■□□□□ 0.65
CLPX-203ENST00000558958 H3BNC9 293 aa19.1■□□□□ 0.65
CLPX-203ENST00000558958 TULP2O00295 520 aa19.1■□□□□ 0.65
CLPX-203ENST00000558958 XPO1O14980 1071 aaKnown RBP19.1■□□□□ 0.65
CLPX-203ENST00000558958 GRM6O15303 877 aa19.1■□□□□ 0.65
CLPX-203ENST00000558958 ZSCAN12O43309 604 aa19.1■□□□□ 0.65
CLPX-203ENST00000558958 BEST1O76090 585 aa19.1■□□□□ 0.65
CLPX-203ENST00000558958 CXCL14O95715 111 aa19.1■□□□□ 0.65
CLPX-203ENST00000558958 CACNA2D1P54289 1103 aa19.1■□□□□ 0.65
CLPX-203ENST00000558958 SLC8A3P57103 927 aa19.1■□□□□ 0.65
CLPX-203ENST00000558958 SMAD3P84022 425 aaKnown RBP19.1■□□□□ 0.65
CLPX-203ENST00000558958 C1QBPQ07021 282 aaKnown RBP19.1■□□□□ 0.65
CLPX-203ENST00000558958 PTP4A2Q12974 167 aa19.1■□□□□ 0.65
CLPX-203ENST00000558958 PTPN20Q4JDL3 420 aa19.1■□□□□ 0.65
CLPX-203ENST00000558958 PMF1Q6P1K2 205 aa19.1■□□□□ 0.65
CLPX-203ENST00000558958 RNF19BQ6ZMZ0 732 aa19.1■□□□□ 0.65
CLPX-203ENST00000558958 ZSCAN30Q86W11 494 aa19.1■□□□□ 0.65
CLPX-203ENST00000558958 CCAR2Q8N163 923 aaKnown RBP19.1■□□□□ 0.65
CLPX-203ENST00000558958 ATRIPQ8WXE1 791 aa19.1■□□□□ 0.65
CLPX-203ENST00000558958 VCPIP1Q96JH7 1222 aa19.1■□□□□ 0.65
CLPX-203ENST00000558958 PGLYRP2Q96PD5 576 aa19.1■□□□□ 0.65
CLPX-203ENST00000558958 TCF25Q9BQ70 676 aa19.1■□□□□ 0.65
CLPX-203ENST00000558958 SLC28A3Q9HAS3 691 aa19.1■□□□□ 0.65
CLPX-203ENST00000558958 ABCB6Q9NP58 842 aa19.1■□□□□ 0.65
CLPX-203ENST00000558958 TLR9Q9NR96 1032 aa19.1■□□□□ 0.65
CLPX-203ENST00000558958 ABI2Q9NYB9 513 aaPredicted RBP19.1■□□□□ 0.65
CLPX-203ENST00000558958 ADAM22Q9P0K1 906 aa19.1■□□□□ 0.65
CLPX-203ENST00000558958 TFR2Q9UP52 801 aa19.1■□□□□ 0.65
CLPX-203ENST00000558958 MTMR11A4FU01 709 aa19.09■□□□□ 0.65
CLPX-203ENST00000558958 TEX28O15482 410 aa19.09■□□□□ 0.65
CLPX-203ENST00000558958 PJA2O43164 708 aa19.09■□□□□ 0.65
CLPX-203ENST00000558958 VNN2O95498 520 aa19.09■□□□□ 0.65
CLPX-203ENST00000558958 ABCB4P21439 1286 aa19.09■□□□□ 0.65
CLPX-203ENST00000558958 CYP2F1P24903 491 aa19.09■□□□□ 0.65
CLPX-203ENST00000558958 PLA2G4AP47712 749 aa19.09■□□□□ 0.65
CLPX-203ENST00000558958 RPL34P49207 117 aaKnown RBP19.09■□□□□ 0.65
CLPX-203ENST00000558958 GPM6BQ13491 265 aa19.09■□□□□ 0.65
CLPX-203ENST00000558958 CAMK1Q14012 370 aa19.09■□□□□ 0.65
CLPX-203ENST00000558958 RAB33AQ14088 237 aa19.09■□□□□ 0.65
CLPX-203ENST00000558958 MMS22LQ6ZRQ5 1243 aa19.09■□□□□ 0.65
CLPX-203ENST00000558958 ZNF662Q6ZS27 426 aa19.09■□□□□ 0.65
CLPX-203ENST00000558958 ERICH1Q86X53 443 aa19.09■□□□□ 0.65
CLPX-203ENST00000558958 REXO1L1PQ8IX06 675 aa19.09■□□□□ 0.65
CLPX-203ENST00000558958 TXLNBQ8N3L3 684 aa19.09■□□□□ 0.65
CLPX-203ENST00000558958 ATAD1Q8NBU5 361 aa19.09■□□□□ 0.65
CLPX-203ENST00000558958 ZMIZ2Q8NF64 920 aa19.09■□□□□ 0.65
CLPX-203ENST00000558958 SPPL2BQ8TCT7 592 aa19.09■□□□□ 0.65
CLPX-203ENST00000558958 C2orf15Q8WU43 125 aaKnown RBP19.09■□□□□ 0.65
CLPX-203ENST00000558958 PPP1R13BQ96KQ4 1090 aa19.09■□□□□ 0.65
CLPX-203ENST00000558958 CPXM1Q96SM3 734 aa19.09■□□□□ 0.65
CLPX-203ENST00000558958 C11orf70Q9BRQ4 267 aa19.09■□□□□ 0.65
CLPX-203ENST00000558958 SLC4A5Q9BY07 1137 aa19.09■□□□□ 0.65
CLPX-203ENST00000558958 UBXN6Q9BZV1 441 aa19.09■□□□□ 0.65
CLPX-203ENST00000558958 LACRTQ9GZZ8 138 aa19.09■□□□□ 0.65
CLPX-203ENST00000558958 THAP2Q9H0W7 228 aa19.09■□□□□ 0.65
CLPX-203ENST00000558958 ENTPD7Q9NQZ7 604 aa19.09■□□□□ 0.65
CLPX-203ENST00000558958 TRMT1Q9NXH9 659 aaKnown RBP19.09■□□□□ 0.65
CLPX-203ENST00000558958 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP19.09■□□□□ 0.65
CLPX-203ENST00000558958 USP27XA6NNY8 438 aa19.09■□□□□ 0.65
CLPX-203ENST00000558958 FSCN2O14926 492 aa19.09■□□□□ 0.65
CLPX-203ENST00000558958 CCP110O43303 1012 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms