RNA–Protein interactions for RNA: ENST00000558117.1

RTF1-204, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene RTF1, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-204ENST00000558117 NAIF1Q69YI7 327 aaPredicted RBP7.2□□□□□ -1.26
RTF1-204ENST00000558117 HTR3DQ70Z44 454 aa7.2□□□□□ -1.26
RTF1-204ENST00000558117 OR52N2Q8NGI0 321 aa7.2□□□□□ -1.26
RTF1-204ENST00000558117 SLC35B2Q8TB61 432 aa7.2□□□□□ -1.26
RTF1-204ENST00000558117 CCHCR1Q8TD31 782 aa7.2□□□□□ -1.26
RTF1-204ENST00000558117 HOOK2Q96ED9 719 aa7.2□□□□□ -1.26
RTF1-204ENST00000558117 ZBED3Q96IU2 234 aaPredicted RBP7.2□□□□□ -1.26
RTF1-204ENST00000558117 CEP89Q96ST8 783 aa7.2□□□□□ -1.26
RTF1-204ENST00000558117 EYA3Q99504 573 aa7.2□□□□□ -1.26
RTF1-204ENST00000558117 TMPRSS5Q9H3S3 457 aa7.2□□□□□ -1.26
RTF1-204ENST00000558117 AASDHPPTQ9NRN7 309 aa7.2□□□□□ -1.26
RTF1-204ENST00000558117 LANCL2Q9NS86 450 aa7.2□□□□□ -1.26
RTF1-204ENST00000558117 CEP72Q9P209 647 aa7.2□□□□□ -1.26
RTF1-204ENST00000558117 EIF2B4Q9UI10 523 aaKnown RBP7.2□□□□□ -1.26
RTF1-204ENST00000558117 LUC7L2Q9Y383 392 aaKnown RBP7.2□□□□□ -1.26
RTF1-204ENST00000558117 REXO2Q9Y3B8 237 aaKnown RBP7.2□□□□□ -1.26
RTF1-204ENST00000558117 IPPQ9Y573 584 aa7.2□□□□□ -1.26
RTF1-204ENST00000558117 PCDHA13Q9Y5I0 950 aa7.2□□□□□ -1.26
RTF1-204ENST00000558117 MYO9BQ13459 2157 aa7.2□□□□□ -1.26
RTF1-204ENST00000558117 MYO15AQ9UKN7 3530 aa7.2□□□□□ -1.26
RTF1-204ENST00000558117 XDHP47989 1333 aa7.2□□□□□ -1.26
RTF1-204ENST00000558117 LAMB2P55268 1798 aa7.2□□□□□ -1.26
RTF1-204ENST00000558117 DNAH14Q0VDD8 3507 aa7.19□□□□□ -1.26
RTF1-204ENST00000558117 MED19A0JLT2 244 aaPredicted RBP7.19□□□□□ -1.26
RTF1-204ENST00000558117 FAM171A2A8MVW0 826 aa7.19□□□□□ -1.26
RTF1-204ENST00000558117 NPIPB8E9PQR5 432 aa7.19□□□□□ -1.26
RTF1-204ENST00000558117 ERC2O15083 957 aa7.19□□□□□ -1.26
RTF1-204ENST00000558117 FAM20BO75063 409 aa7.19□□□□□ -1.26
RTF1-204ENST00000558117 ZNF202O95125 648 aa7.19□□□□□ -1.26
RTF1-204ENST00000558117 FPR1P21462 350 aa7.19□□□□□ -1.26
RTF1-204ENST00000558117 GUCY1A2P33402 732 aa7.19□□□□□ -1.26
RTF1-204ENST00000558117 MCL1Q07820 350 aa7.19□□□□□ -1.26
RTF1-204ENST00000558117 IL10RAQ13651 578 aa7.19□□□□□ -1.26
RTF1-204ENST00000558117 PLEKHG6Q3KR16 790 aa7.19□□□□□ -1.26
RTF1-204ENST00000558117 C3orf36Q3SXR2 165 aa7.19□□□□□ -1.26
RTF1-204ENST00000558117 RABL3Q5HYI8 236 aa7.19□□□□□ -1.26
RTF1-204ENST00000558117 FAM47AQ5JRC9 791 aa7.19□□□□□ -1.26
RTF1-204ENST00000558117 SULT6B1Q6IMI4 303 aa7.19□□□□□ -1.26
RTF1-204ENST00000558117 GPRIN1Q7Z2K8 1008 aa7.19□□□□□ -1.26
RTF1-204ENST00000558117 ZNF572Q7Z3I7 529 aaPredicted RBP7.19□□□□□ -1.26
RTF1-204ENST00000558117 CMTR2Q8IYT2 770 aaKnown RBP7.19□□□□□ -1.26
RTF1-204ENST00000558117 ZNF34Q8IZ26 560 aa7.19□□□□□ -1.26
RTF1-204ENST00000558117 CPA6Q8N4T0 437 aa7.19□□□□□ -1.26
RTF1-204ENST00000558117 TBC1D16Q8TBP0 767 aa7.19□□□□□ -1.26
RTF1-204ENST00000558117 RAB24Q969Q5 203 aa7.19□□□□□ -1.26
RTF1-204ENST00000558117 C7orf25Q9BPX7 421 aa7.19□□□□□ -1.26
RTF1-204ENST00000558117 SENP6Q9GZR1 1112 aaPredicted RBP7.19□□□□□ -1.26
RTF1-204ENST00000558117 SORCS3Q9UPU3 1222 aa7.19□□□□□ -1.26
RTF1-204ENST00000558117 FAM186AA6NE01 2351 aa7.19□□□□□ -1.26
RTF1-204ENST00000558117 GVINP1Q7Z2Y8 2422 aa7.19□□□□□ -1.26
RTF1-204ENST00000558117 DMDP11532 3685 aa7.19□□□□□ -1.26
RTF1-204ENST00000558117 DDX60Q8IY21 1712 aaKnown RBP7.18□□□□□ -1.26
RTF1-204ENST00000558117 CCDC154A6NI56 674 aa7.18□□□□□ -1.26
RTF1-204ENST00000558117 ERVV-1B6SEH8 477 aa7.18□□□□□ -1.26
RTF1-204ENST00000558117 KCNQ3O43525 872 aa7.18□□□□□ -1.26
RTF1-204ENST00000558117 AMY1AP04745 511 aa7.18□□□□□ -1.26
RTF1-204ENST00000558117 CETPP11597 493 aa7.18□□□□□ -1.26
RTF1-204ENST00000558117 ALOX15P16050 662 aaPredicted RBP7.18□□□□□ -1.26
RTF1-204ENST00000558117 MGAT1P26572 445 aa7.18□□□□□ -1.26
RTF1-204ENST00000558117 SLC16A1P53985 500 aa7.18□□□□□ -1.26
RTF1-204ENST00000558117 ADKP55263 362 aaKnown RBP7.18□□□□□ -1.26
RTF1-204ENST00000558117 ABHD18Q0P651 414 aa7.18□□□□□ -1.26
RTF1-204ENST00000558117 TOB2Q14106 344 aaPredicted RBP7.18□□□□□ -1.26
RTF1-204ENST00000558117 SUPT20HL1Q3ZLR7 823 aa7.18□□□□□ -1.26
RTF1-204ENST00000558117 EFCAB12Q6NXP0 572 aa7.18□□□□□ -1.26
RTF1-204ENST00000558117 RHOT1Q8IXI2 618 aa7.18□□□□□ -1.26
RTF1-204ENST00000558117 RAVER1Q8IY67 606 aaKnown RBP7.18□□□□□ -1.26
RTF1-204ENST00000558117 ZGPATQ8N5A5 531 aaKnown RBP7.18□□□□□ -1.26
RTF1-204ENST00000558117 PRSS33Q8NF86 280 aa7.18□□□□□ -1.26
RTF1-204ENST00000558117 TFAP2CQ92754 450 aa7.18□□□□□ -1.26
RTF1-204ENST00000558117 TIFAQ96CG3 184 aa7.18□□□□□ -1.26
RTF1-204ENST00000558117 MOCS1Q9NZB8 636 aa7.18□□□□□ -1.26
RTF1-204ENST00000558117 IP6K2Q9UHH9 426 aa7.18□□□□□ -1.26
RTF1-204ENST00000558117 SAP30BPQ9UHR5 308 aaKnown RBP7.18□□□□□ -1.26
RTF1-204ENST00000558117 AJAP1Q9UKB5 411 aaPredicted RBP7.18□□□□□ -1.26
RTF1-204ENST00000558117 HS3ST3A1Q9Y663 406 aa7.18□□□□□ -1.26
RTF1-204ENST00000558117 USP24Q9UPU5 2620 aa7.18□□□□□ -1.26
RTF1-204ENST00000558117 LRRC37AA6NMS7 1700 aa7.18□□□□□ -1.26
RTF1-204ENST00000558117 FAM208BQ5VWN6 2430 aa7.18□□□□□ -1.26
RTF1-204ENST00000558117 TBKBP1A7MCY6 615 aa7.17□□□□□ -1.26
RTF1-204ENST00000558117 CXorf49A8MYA2 514 aaPredicted RBP7.17□□□□□ -1.26
RTF1-204ENST00000558117 TRIM24O15164 1050 aa7.17□□□□□ -1.26
RTF1-204ENST00000558117 PEX11BO96011 259 aa7.17□□□□□ -1.26
RTF1-204ENST00000558117 PCSK1P29120 753 aa7.17□□□□□ -1.26
RTF1-204ENST00000558117 MCM7P33993 719 aa7.17□□□□□ -1.26
RTF1-204ENST00000558117 BMT2Q1RMZ1 405 aa7.17□□□□□ -1.26
RTF1-204ENST00000558117 UAP1L1Q3KQV9 507 aa7.17□□□□□ -1.26
RTF1-204ENST00000558117 AFMIDQ63HM1 303 aa7.17□□□□□ -1.26
RTF1-204ENST00000558117 Q8N1X5 172 aa7.17□□□□□ -1.26
RTF1-204ENST00000558117 ZFP28Q8NHY6 868 aa7.17□□□□□ -1.26
RTF1-204ENST00000558117 CPT1CQ8TCG5 803 aa7.17□□□□□ -1.26
RTF1-204ENST00000558117 ZNF483Q8TF39 744 aaPredicted RBP7.17□□□□□ -1.26
RTF1-204ENST00000558117 TESK2Q96S53 571 aa7.17□□□□□ -1.26
RTF1-204ENST00000558117 NDC1Q9BTX1 674 aa7.17□□□□□ -1.26
RTF1-204ENST00000558117 MXD3Q9BW11 206 aa7.17□□□□□ -1.26
RTF1-204ENST00000558117 TMEM140Q9NV12 185 aa7.17□□□□□ -1.26
RTF1-204ENST00000558117 ACTL7AQ9Y615 435 aa7.17□□□□□ -1.26
RTF1-204ENST00000558117 KIF20BQ96Q89 1820 aa7.17□□□□□ -1.26
RTF1-204ENST00000558117 MAP1BP46821 2468 aaKnown RBP7.17□□□□□ -1.26
RTF1-204ENST00000558117 WDR87Q6ZQQ6 2873 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms