RNA–Protein interactions for RNA: ENST00000558036.5

SNRPA1-205, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,108 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-205ENST00000558036 OR6B2Q6IFH4 312 aa21.52■■□□□ 1.04
SNRPA1-205ENST00000558036 IP6K2Q9UHH9 426 aa21.52■■□□□ 1.04
SNRPA1-205ENST00000558036 SIGLEC16A6NMB1 481 aa21.52■■□□□ 1.03
SNRPA1-205ENST00000558036 CES2O00748 559 aa21.52■■□□□ 1.03
SNRPA1-205ENST00000558036 BEST1O76090 585 aa21.52■■□□□ 1.03
SNRPA1-205ENST00000558036 PBX3P40426 434 aa21.52■■□□□ 1.03
SNRPA1-205ENST00000558036 SSR1P43307 286 aaKnown RBP21.52■■□□□ 1.03
SNRPA1-205ENST00000558036 TAS2R40P59535 323 aa21.52■■□□□ 1.03
SNRPA1-205ENST00000558036 ZNF268Q14587 947 aaPredicted RBP21.52■■□□□ 1.03
SNRPA1-205ENST00000558036 LLGL1Q15334 1064 aa21.52■■□□□ 1.03
SNRPA1-205ENST00000558036 TAF5Q15542 800 aa21.52■■□□□ 1.03
SNRPA1-205ENST00000558036 ZNF572Q7Z3I7 529 aaPredicted RBP21.52■■□□□ 1.03
SNRPA1-205ENST00000558036 MCRS1Q96EZ8 462 aa21.52■■□□□ 1.03
SNRPA1-205ENST00000558036 SUSD3Q96L08 255 aa21.52■■□□□ 1.03
SNRPA1-205ENST00000558036 RNPC3Q96LT9 517 aaKnown RBP21.52■■□□□ 1.03
SNRPA1-205ENST00000558036 MED10Q9BTT4 135 aa21.52■■□□□ 1.03
SNRPA1-205ENST00000558036 TMEM106CQ9BVX2 250 aa21.52■■□□□ 1.03
SNRPA1-205ENST00000558036 MIS12Q9H081 205 aa21.52■■□□□ 1.03
SNRPA1-205ENST00000558036 PCDHA3Q9Y5H8 950 aa21.52■■□□□ 1.03
SNRPA1-205ENST00000558036 TRIM43BA6NCK2 446 aa21.51■■□□□ 1.03
SNRPA1-205ENST00000558036 FAM163BP0C2L3 166 aa21.51■■□□□ 1.03
SNRPA1-205ENST00000558036 PYGMP11217 842 aa21.51■■□□□ 1.03
SNRPA1-205ENST00000558036 GJC1P36383 396 aa21.51■■□□□ 1.03
SNRPA1-205ENST00000558036 ADAT2Q7Z6V5 191 aaKnown RBP21.51■■□□□ 1.03
SNRPA1-205ENST00000558036 TRIM43Q96BQ3 446 aaPredicted RBP21.51■■□□□ 1.03
SNRPA1-205ENST00000558036 PCED1BQ96HM7 432 aa21.51■■□□□ 1.03
SNRPA1-205ENST00000558036 TMEM209Q96SK2 561 aa21.51■■□□□ 1.03
SNRPA1-205ENST00000558036 HNRNPABQ99729 332 aaKnown RBP21.51■■□□□ 1.03
SNRPA1-205ENST00000558036 AP1M1Q9BXS5 423 aa21.51■■□□□ 1.03
SNRPA1-205ENST00000558036 SLC4A5Q9BY07 1137 aa21.51■■□□□ 1.03
SNRPA1-205ENST00000558036 DNAI2Q9GZS0 605 aa21.51■■□□□ 1.03
SNRPA1-205ENST00000558036 CARD9Q9H257 536 aa21.51■■□□□ 1.03
SNRPA1-205ENST00000558036 NRDE2Q9H7Z3 1164 aa21.51■■□□□ 1.03
SNRPA1-205ENST00000558036 RNF14Q9UBS8 474 aa21.51■■□□□ 1.03
SNRPA1-205ENST00000558036 CCDC66A2RUB6 948 aa21.5■■□□□ 1.03
SNRPA1-205ENST00000558036 TBKBP1A7MCY6 615 aa21.5■■□□□ 1.03
SNRPA1-205ENST00000558036 PARNO95453 639 aaKnown RBP21.5■■□□□ 1.03
SNRPA1-205ENST00000558036 FGGP02679 453 aa21.5■■□□□ 1.03
SNRPA1-205ENST00000558036 NECAB2Q7Z6G3 386 aa21.5■■□□□ 1.03
SNRPA1-205ENST00000558036 OR10T2Q8NGX3 314 aa21.5■■□□□ 1.03
SNRPA1-205ENST00000558036 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.5■■□□□ 1.03
SNRPA1-205ENST00000558036 ACTRT1Q8TDG2 376 aa21.5■■□□□ 1.03
SNRPA1-205ENST00000558036 CLEC4CQ8WTT0 213 aa21.5■■□□□ 1.03
SNRPA1-205ENST00000558036 RHOBTB2Q9BYZ6 727 aa21.5■■□□□ 1.03
SNRPA1-205ENST00000558036 WDR35Q9P2L0 1181 aa21.5■■□□□ 1.03
SNRPA1-205ENST00000558036 PGRMC1O00264 195 aaKnown RBP21.5■■□□□ 1.03
SNRPA1-205ENST00000558036 CYP11A1P05108 521 aa21.5■■□□□ 1.03
SNRPA1-205ENST00000558036 LCP1P13796 627 aa21.5■■□□□ 1.03
SNRPA1-205ENST00000558036 SLC1A1P43005 524 aa21.5■■□□□ 1.03
SNRPA1-205ENST00000558036 GSCP56915 257 aaPredicted RBP21.5■■□□□ 1.03
SNRPA1-205ENST00000558036 OVOS1Q6IE37 1185 aa21.5■■□□□ 1.03
SNRPA1-205ENST00000558036 TMCO2Q7Z6W1 182 aaPredicted RBP21.5■■□□□ 1.03
SNRPA1-205ENST00000558036 TMEM110Q86TL2 294 aa21.5■■□□□ 1.03
SNRPA1-205ENST00000558036 METTL23Q86XA0 190 aa21.5■■□□□ 1.03
SNRPA1-205ENST00000558036 NPAS4Q8IUM7 802 aa21.5■■□□□ 1.03
SNRPA1-205ENST00000558036 RASGEF1CQ8N431 466 aa21.5■■□□□ 1.03
SNRPA1-205ENST00000558036 RPGRIP1Q96KN7 1286 aa21.5■■□□□ 1.03
SNRPA1-205ENST00000558036 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.5■■□□□ 1.032e-8■□□□□ 10.7
SNRPA1-205ENST00000558036 KRT82Q9NSB4 513 aa21.5■■□□□ 1.03
SNRPA1-205ENST00000558036 NRP1O14786 923 aa21.49■■□□□ 1.03
SNRPA1-205ENST00000558036 PAPSS1O43252 624 aaPredicted RBP21.49■■□□□ 1.03
SNRPA1-205ENST00000558036 SETSIPP0DME0 302 aa21.49■■□□□ 1.03
SNRPA1-205ENST00000558036 CSF2RAP15509 400 aa21.49■■□□□ 1.03
SNRPA1-205ENST00000558036 CTNNA2P26232 953 aa21.49■■□□□ 1.03
SNRPA1-205ENST00000558036 TAP1Q03518 808 aa21.49■■□□□ 1.03
SNRPA1-205ENST00000558036 IKBKEQ14164 716 aa21.49■■□□□ 1.03
SNRPA1-205ENST00000558036 HINFPQ9BQA5 517 aa21.49■■□□□ 1.03
SNRPA1-205ENST00000558036 DUSP16Q9BY84 665 aa21.49■■□□□ 1.03
SNRPA1-205ENST00000558036 ANKZF1Q9H8Y5 726 aa21.49■■□□□ 1.03
SNRPA1-205ENST00000558036 TMEM30AQ9NV96 361 aa21.49■■□□□ 1.03
SNRPA1-205ENST00000558036 CDH9Q9ULB4 789 aa21.49■■□□□ 1.03
SNRPA1-205ENST00000558036 NT5C1B-RDH14C9J2C7 533 aa21.49■■□□□ 1.03
SNRPA1-205ENST00000558036 PSMA2P25787 234 aa21.49■■□□□ 1.03
SNRPA1-205ENST00000558036 PCSK1P29120 753 aa21.49■■□□□ 1.03
SNRPA1-205ENST00000558036 CACNA2D1P54289 1103 aa21.49■■□□□ 1.03
SNRPA1-205ENST00000558036 KCTD19Q17RG1 926 aaPredicted RBP21.49■■□□□ 1.03
SNRPA1-205ENST00000558036 TRNP1Q6NT89 227 aa21.49■■□□□ 1.03
SNRPA1-205ENST00000558036 OLFML1Q6UWY5 402 aa21.49■■□□□ 1.03
SNRPA1-205ENST00000558036 PIGZQ86VD9 579 aa21.49■■□□□ 1.03
SNRPA1-205ENST00000558036 TTC3P53804 2025 aa21.48■■□□□ 1.03
SNRPA1-205ENST00000558036 TADA2AO75478 443 aa21.48■■□□□ 1.03
SNRPA1-205ENST00000558036 NPR3P17342 541 aa21.48■■□□□ 1.03
SNRPA1-205ENST00000558036 RWDD2BP57060 319 aa21.48■■□□□ 1.03
SNRPA1-205ENST00000558036 MAP3K7CLP57077 242 aa21.48■■□□□ 1.03
SNRPA1-205ENST00000558036 CC2D1AQ6P1N0 951 aaPredicted RBP21.48■■□□□ 1.03
SNRPA1-205ENST00000558036 CLEC20AQ6ZU45 233 aa21.48■■□□□ 1.03
SNRPA1-205ENST00000558036 MYCBPAPQ8TBZ2 947 aa21.48■■□□□ 1.03
SNRPA1-205ENST00000558036 STK32AQ8WU08 396 aa21.48■■□□□ 1.03
SNRPA1-205ENST00000558036 B3GALT6Q96L58 329 aa21.48■■□□□ 1.03
SNRPA1-205ENST00000558036 KCNK16Q96T55 309 aa21.48■■□□□ 1.03
SNRPA1-205ENST00000558036 TMLHEQ9NVH6 421 aa21.48■■□□□ 1.03
SNRPA1-205ENST00000558036 KLHL11Q9NVR0 708 aa21.48■■□□□ 1.03
SNRPA1-205ENST00000558036 DSEQ9UL01 958 aa21.48■■□□□ 1.03
SNRPA1-205ENST00000558036 NR2E1Q9Y466 385 aa21.48■■□□□ 1.03
SNRPA1-205ENST00000558036 FLT3P36888 993 aa21.47■■□□□ 1.03
SNRPA1-205ENST00000558036 SLC11A1P49279 550 aa21.47■■□□□ 1.03
SNRPA1-205ENST00000558036 LONRF2Q1L5Z9 754 aa21.47■■□□□ 1.03
SNRPA1-205ENST00000558036 ATP13A4Q4VNC1 1196 aa21.47■■□□□ 1.03
SNRPA1-205ENST00000558036 CNKSR3Q6P9H4 555 aa21.47■■□□□ 1.03
SNRPA1-205ENST00000558036 FAM35AQ86V20 835 aa21.47■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms