RNA–Protein interactions for RNA: ENST00000557431.5

SLIRP-210, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-210ENST00000557431 LIMK1P53667 647 aa15.11■□□□□ 0.01
SLIRP-210ENST00000557431 USP46P62068 366 aa15.11■□□□□ 0.01
SLIRP-210ENST00000557431 RPL10AP62906 217 aaKnown RBP15.11■□□□□ 0.01
SLIRP-210ENST00000557431 ZNF268Q14587 947 aaPredicted RBP15.11■□□□□ 0.01
SLIRP-210ENST00000557431 POSTNQ15063 836 aa15.11■□□□□ 0.01
SLIRP-210ENST00000557431 PDGFRLQ15198 375 aa15.11■□□□□ 0.01
SLIRP-210ENST00000557431 RNF43Q68DV7 783 aa15.11■□□□□ 0.01
SLIRP-210ENST00000557431 TTC30AQ86WT1 665 aa15.11■□□□□ 0.01
SLIRP-210ENST00000557431 NT5DC4Q86YG4 428 aa15.11■□□□□ 0.01
SLIRP-210ENST00000557431 SYCP3Q8IZU3 236 aa15.11■□□□□ 0.01
SLIRP-210ENST00000557431 OR5B17Q8NGF7 314 aa15.11■□□□□ 0.01
SLIRP-210ENST00000557431 LEO1Q8WVC0 666 aaPredicted RBP15.11■□□□□ 0.01
SLIRP-210ENST00000557431 HPS3Q969F9 1004 aa15.11■□□□□ 0.01
SLIRP-210ENST00000557431 MYLPFQ96A32 169 aa15.11■□□□□ 0.01
SLIRP-210ENST00000557431 HVCN1Q96D96 273 aa15.11■□□□□ 0.01
SLIRP-210ENST00000557431 LOXL4Q96JB6 756 aa15.11■□□□□ 0.01
SLIRP-210ENST00000557431 ACBD6Q9BR61 282 aa15.11■□□□□ 0.01
SLIRP-210ENST00000557431 EDEM2Q9BV94 578 aa15.11■□□□□ 0.01
SLIRP-210ENST00000557431 ZDHHC4Q9NPG8 344 aa15.11■□□□□ 0.01
SLIRP-210ENST00000557431 ANGPTL2Q9UKU9 493 aa15.11■□□□□ 0.01
SLIRP-210ENST00000557431 NME7Q9Y5B8 376 aa15.11■□□□□ 0.01
SLIRP-210ENST00000557431 TRAV19A0A0A6YYK7 116 aa15.1■□□□□ 0.01
SLIRP-210ENST00000557431 CCDC163A0A0D9SF12 145 aa15.1■□□□□ 0.01
SLIRP-210ENST00000557431 PATE3B3GLJ2 98 aa15.1■□□□□ 0.01
SLIRP-210ENST00000557431 KCNK5O95279 499 aa15.1■□□□□ 0.01
SLIRP-210ENST00000557431 USP17L7P0C7H9 530 aa15.1■□□□□ 0.01
SLIRP-210ENST00000557431 TMEM191BP0C7N4 346 aa15.1■□□□□ 0.01
SLIRP-210ENST00000557431 BCKDHBP21953 392 aa15.1■□□□□ 0.01
SLIRP-210ENST00000557431 BDNFP23560 247 aa15.1■□□□□ 0.01
SLIRP-210ENST00000557431 PNPLA4P41247 253 aa15.1■□□□□ 0.01
SLIRP-210ENST00000557431 MESP2Q0VG99 397 aa15.1■□□□□ 0.01
SLIRP-210ENST00000557431 SOWAHAQ2M3V2 549 aa15.1■□□□□ 0.01
SLIRP-210ENST00000557431 C2orf27AQ580R0 203 aa15.1■□□□□ 0.01
SLIRP-210ENST00000557431 RRAGBQ5VZM2 374 aa15.1■□□□□ 0.01
SLIRP-210ENST00000557431 PSAPL1Q6NUJ1 521 aa15.1■□□□□ 0.01
SLIRP-210ENST00000557431 BRAPQ7Z569 592 aa15.1■□□□□ 0.01
SLIRP-210ENST00000557431 CCDC33Q8N5R6 958 aa15.1■□□□□ 0.01
SLIRP-210ENST00000557431 CAMKK1Q8N5S9 505 aa15.1■□□□□ 0.01
SLIRP-210ENST00000557431 KBTBD7Q8WVZ9 684 aa15.1■□□□□ 0.01
SLIRP-210ENST00000557431 ZC3H10Q96K80 434 aaKnown RBP15.1■□□□□ 0.01
SLIRP-210ENST00000557431 SYT15Q9BQS2 421 aa15.1■□□□□ 0.01
SLIRP-210ENST00000557431 CRTAC1Q9NQ79 661 aa15.1■□□□□ 0.01
SLIRP-210ENST00000557431 UXTQ9UBK9 157 aaPredicted RBP15.1■□□□□ 0.01
SLIRP-210ENST00000557431 ZMYM5Q9UJ78 669 aa15.1■□□□□ 0.01
SLIRP-210ENST00000557431 LAMA1P25391 3075 aa15.09■□□□□ 0.01
SLIRP-210ENST00000557431 C4orf47A7E2U8 309 aa15.09■□□□□ 0.01
SLIRP-210ENST00000557431 APBB3O95704 486 aa15.09■□□□□ 0.01
SLIRP-210ENST00000557431 BMP15O95972 392 aa15.09■□□□□ 0.01
SLIRP-210ENST00000557431 TOP3BO95985 862 aaKnown RBP15.09■□□□□ 0.01
SLIRP-210ENST00000557431 PDGFRBP09619 1106 aa15.09■□□□□ 0.01
SLIRP-210ENST00000557431 HNRNPLP14866 589 aaKnown RBP eCLIP15.09■□□□□ 0.01
SLIRP-210ENST00000557431 SPINK2P20155 84 aa15.09■□□□□ 0.01
SLIRP-210ENST00000557431 ABCD1P33897 745 aa15.09■□□□□ 0.01
SLIRP-210ENST00000557431 OPRD1P41143 372 aa15.09■□□□□ 0.01
SLIRP-210ENST00000557431 IFRD2Q12894 506 aaPredicted RBP15.09■□□□□ 0.01
SLIRP-210ENST00000557431 KCNB1Q14721 858 aa15.09■□□□□ 0.01
SLIRP-210ENST00000557431 GAB4Q2WGN9 574 aa15.09■□□□□ 0.01
SLIRP-210ENST00000557431 ANO7Q6IWH7 933 aa15.09■□□□□ 0.01
SLIRP-210ENST00000557431 SV2BQ7L1I2 683 aa15.09■□□□□ 0.01
SLIRP-210ENST00000557431 SYT13Q7L8C5 426 aa15.09■□□□□ 0.01
SLIRP-210ENST00000557431 TRMT2BQ96GJ1 504 aaKnown RBP15.09■□□□□ 0.01
SLIRP-210ENST00000557431 MYRFLQ96LU7 910 aa15.09■□□□□ 0.01
SLIRP-210ENST00000557431 TMEM206Q9H813 350 aa15.09■□□□□ 0.01
SLIRP-210ENST00000557431 STK17AQ9UEE5 414 aa15.09■□□□□ 0.01
SLIRP-210ENST00000557431 CCDC39Q9UFE4 941 aa15.09■□□□□ 0.01
SLIRP-210ENST00000557431 ITGA11Q9UKX5 1188 aa15.09■□□□□ 0.01
SLIRP-210ENST00000557431 EXOC7Q9UPT5 735 aa15.09■□□□□ 0.01
SLIRP-210ENST00000557431 GABRDO14764 452 aa15.08■□□□□ 0
SLIRP-210ENST00000557431 FOXD2O60548 495 aaPredicted RBP15.08■□□□□ 0
SLIRP-210ENST00000557431 CAVIN2O95810 425 aa15.08■□□□□ 0
SLIRP-210ENST00000557431 GAP43P17677 238 aa15.08■□□□□ 0
SLIRP-210ENST00000557431 HDCP19113 662 aa15.08■□□□□ 0
SLIRP-210ENST00000557431 GARTP22102 1010 aa15.08■□□□□ 0
SLIRP-210ENST00000557431 AMPD2Q01433 879 aa15.08■□□□□ 0
SLIRP-210ENST00000557431 CYP27A1Q02318 531 aa15.08■□□□□ 0
SLIRP-210ENST00000557431 ELF2Q15723 593 aa15.08■□□□□ 0
SLIRP-210ENST00000557431 CBWD2Q8IUF1 395 aa15.08■□□□□ 0
SLIRP-210ENST00000557431 TMEM86AQ8N2M4 240 aa15.08■□□□□ 0
SLIRP-210ENST00000557431 GPD1LQ8N335 351 aa15.08■□□□□ 0
SLIRP-210ENST00000557431 TOP6BLQ8N6T0 577 aa15.08■□□□□ 0
SLIRP-210ENST00000557431 LRRC52Q8N7C0 313 aa15.08■□□□□ 0
SLIRP-210ENST00000557431 PDILTQ8N807 584 aa15.08■□□□□ 0
SLIRP-210ENST00000557431 TSTD1Q8NFU3 115 aa15.08■□□□□ 0
SLIRP-210ENST00000557431 CACTINQ8WUQ7 758 aaKnown RBP15.08■□□□□ 0
SLIRP-210ENST00000557431 DDX1Q92499 740 aaKnown RBP15.08■□□□□ 0
SLIRP-210ENST00000557431 ATP2A3Q93084 1043 aa15.08■□□□□ 0
SLIRP-210ENST00000557431 LSM14BQ9BX40 385 aaKnown RBP15.08■□□□□ 0
SLIRP-210ENST00000557431 ABCB6Q9NP58 842 aa15.08■□□□□ 0
SLIRP-210ENST00000557431 VPS45Q9NRW7 570 aa15.08■□□□□ 0
SLIRP-210ENST00000557431 PANK4Q9NVE7 773 aa15.08■□□□□ 0
SLIRP-210ENST00000557431 SMPD4Q9NXE4 827 aa15.08■□□□□ 0
SLIRP-210ENST00000557431 GDAP2Q9NXN4 497 aa15.08■□□□□ 0
SLIRP-210ENST00000557431 SEL1LQ9UBV2 794 aa15.08■□□□□ 0
SLIRP-210ENST00000557431 CIZ1Q9ULV3 898 aaPredicted RBP15.08■□□□□ 0
SLIRP-210ENST00000557431 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.08■□□□□ 0
SLIRP-210ENST00000557431 PCDHGA5Q9Y5G8 931 aa15.08■□□□□ 0
SLIRP-210ENST00000557431 ZFHX4Q86UP3 3567 aa15.08■□□□□ 0
SLIRP-210ENST00000557431 LNP1A1A4G5 178 aa15.07■□□□□ 0
SLIRP-210ENST00000557431 BCLAF3A2AJT9 711 aaKnown RBP15.07■□□□□ 0
SLIRP-210ENST00000557431 K7EQS6 105 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms