RNA–Protein interactions for RNA: ENST00000557201.5

HNRNPC-230, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,371 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-230ENST00000557201 RNF40O75150 1001 aa11.5□□□□□ -0.57
HNRNPC-230ENST00000557201 PRPF40AO75400 957 aaKnown RBP11.5□□□□□ -0.57
HNRNPC-230ENST00000557201 RPP40O75818 363 aaKnown RBP11.5□□□□□ -0.57
HNRNPC-230ENST00000557201 AKAP3O75969 853 aa11.5□□□□□ -0.57
HNRNPC-230ENST00000557201 ITGB3P05106 788 aa11.5□□□□□ -0.57
HNRNPC-230ENST00000557201 GAP43P17677 238 aa11.5□□□□□ -0.57
HNRNPC-230ENST00000557201 DRD1P21728 446 aa11.5□□□□□ -0.57
HNRNPC-230ENST00000557201 GARTP22102 1010 aa11.5□□□□□ -0.57
HNRNPC-230ENST00000557201 CYP2F1P24903 491 aa11.5□□□□□ -0.57
HNRNPC-230ENST00000557201 GJA4P35212 333 aa11.5□□□□□ -0.57
HNRNPC-230ENST00000557201 GALK1P51570 392 aa11.5□□□□□ -0.57
HNRNPC-230ENST00000557201 TFAMQ00059 246 aaKnown RBP11.5□□□□□ -0.57
HNRNPC-230ENST00000557201 AMPD3Q01432 767 aa11.5□□□□□ -0.57
HNRNPC-230ENST00000557201 TSPY1Q01534 308 aa11.5□□□□□ -0.57
HNRNPC-230ENST00000557201 BFSP1Q12934 665 aa11.5□□□□□ -0.57
HNRNPC-230ENST00000557201 USP4Q13107 963 aa11.5□□□□□ -0.57
HNRNPC-230ENST00000557201 PDGFRLQ15198 375 aa11.5□□□□□ -0.57
HNRNPC-230ENST00000557201 SF3A2Q15428 464 aaKnown RBP11.5□□□□□ -0.57
HNRNPC-230ENST00000557201 CFAP221Q4G0U5 840 aa11.5□□□□□ -0.57
HNRNPC-230ENST00000557201 CNNM4Q6P4Q7 775 aa11.5□□□□□ -0.57
HNRNPC-230ENST00000557201 FAM171BQ6P995 826 aa11.5□□□□□ -0.57
HNRNPC-230ENST00000557201 CACNA2D4Q7Z3S7 1137 aa11.5□□□□□ -0.57
HNRNPC-230ENST00000557201 FMR1NBQ8N0W7 255 aaPredicted RBP11.5□□□□□ -0.57
HNRNPC-230ENST00000557201 TMEM86AQ8N2M4 240 aa11.5□□□□□ -0.57
HNRNPC-230ENST00000557201 CAMKK1Q8N5S9 505 aa11.5□□□□□ -0.57
HNRNPC-230ENST00000557201 ENGASEQ8NFI3 743 aa11.5□□□□□ -0.57
HNRNPC-230ENST00000557201 MRPS31Q92665 395 aaKnown RBP11.5□□□□□ -0.57
HNRNPC-230ENST00000557201 DHX58Q96C10 678 aa11.5□□□□□ -0.57
HNRNPC-230ENST00000557201 SAAL1Q96ER3 474 aa11.5□□□□□ -0.57
HNRNPC-230ENST00000557201 ACCSQ96QU6 501 aa11.5□□□□□ -0.57
HNRNPC-230ENST00000557201 SLC22A12Q96S37 553 aa11.5□□□□□ -0.57
HNRNPC-230ENST00000557201 LRRC27Q9C0I9 530 aa11.5□□□□□ -0.57
HNRNPC-230ENST00000557201 ARRDC1-AS1Q9H2J1 176 aa11.5□□□□□ -0.57
HNRNPC-230ENST00000557201 GOLPH3LQ9H4A5 285 aa11.5□□□□□ -0.57
HNRNPC-230ENST00000557201 ECT2Q9H8V3 914 aa11.5□□□□□ -0.57
HNRNPC-230ENST00000557201 MRPL44Q9H9J2 332 aaKnown RBP11.5□□□□□ -0.57
HNRNPC-230ENST00000557201 DDX43Q9NXZ2 648 aaKnown RBP11.5□□□□□ -0.57
HNRNPC-230ENST00000557201 GCNT4Q9P109 453 aa11.5□□□□□ -0.57
HNRNPC-230ENST00000557201 AGAP1Q9UPQ3 857 aa11.5□□□□□ -0.57
HNRNPC-230ENST00000557201 GREB1Q4ZG55 1949 aa11.5□□□□□ -0.57
HNRNPC-230ENST00000557201 EPG5Q9HCE0 2579 aa11.5□□□□□ -0.57
HNRNPC-230ENST00000557201 AXIN1O15169 862 aa11.49□□□□□ -0.57
HNRNPC-230ENST00000557201 ACTN4O43707 911 aaKnown RBP11.49□□□□□ -0.57
HNRNPC-230ENST00000557201 GADD45BO75293 160 aaPredicted RBP11.49□□□□□ -0.57
HNRNPC-230ENST00000557201 ZNF202O95125 648 aa11.49□□□□□ -0.57
HNRNPC-230ENST00000557201 ACAT1P24752 427 aaKnown RBP11.49□□□□□ -0.57
HNRNPC-230ENST00000557201 RPL10AP62906 217 aaKnown RBP11.49□□□□□ -0.57
HNRNPC-230ENST00000557201 FAM160A1Q05DH4 1040 aa11.49□□□□□ -0.57
HNRNPC-230ENST00000557201 MTF1Q14872 753 aa11.49□□□□□ -0.57
HNRNPC-230ENST00000557201 SOWAHAQ2M3V2 549 aa11.49□□□□□ -0.57
HNRNPC-230ENST00000557201 CSGALNACT2Q8N6G5 542 aa11.49□□□□□ -0.57
HNRNPC-230ENST00000557201 TOP6BLQ8N6T0 577 aa11.49□□□□□ -0.57
HNRNPC-230ENST00000557201 OSCP1Q8WVF1 389 aa11.49□□□□□ -0.57
HNRNPC-230ENST00000557201 RNF25Q96BH1 459 aaPredicted RBP11.49□□□□□ -0.57
HNRNPC-230ENST00000557201 CYP2S1Q96SQ9 504 aa11.49□□□□□ -0.57
HNRNPC-230ENST00000557201 P2RY13Q9BPV8 354 aa11.49□□□□□ -0.57
HNRNPC-230ENST00000557201 CBWD1Q9BRT8 395 aa11.49□□□□□ -0.57
HNRNPC-230ENST00000557201 TMEM206Q9H813 350 aa11.49□□□□□ -0.57
HNRNPC-230ENST00000557201 RBAKQ9NYW8 714 aaPredicted RBP11.49□□□□□ -0.57
HNRNPC-230ENST00000557201 TBC1D7Q9P0N9 293 aa11.49□□□□□ -0.57
HNRNPC-230ENST00000557201 UXTQ9UBK9 157 aaPredicted RBP11.49□□□□□ -0.57
HNRNPC-230ENST00000557201 GTF3C4Q9UKN8 822 aa11.49□□□□□ -0.57
HNRNPC-230ENST00000557201 ITGA11Q9UKX5 1188 aa11.49□□□□□ -0.57
HNRNPC-230ENST00000557201 MAGED2Q9UNF1 606 aaPredicted RBP11.49□□□□□ -0.57
HNRNPC-230ENST00000557201 EXOC7Q9UPT5 735 aa11.49□□□□□ -0.57
HNRNPC-230ENST00000557201 PCDHGA5Q9Y5G8 931 aa11.49□□□□□ -0.57
HNRNPC-230ENST00000557201 ACACBO00763 2458 aa11.49□□□□□ -0.57
HNRNPC-230ENST00000557201 EML5Q05BV3 1969 aa11.49□□□□□ -0.57
HNRNPC-230ENST00000557201 CACNA1BQ00975 2339 aa11.49□□□□□ -0.57
HNRNPC-230ENST00000557201 RALGAPA1Q6GYQ0 2036 aa11.48□□□□□ -0.57
HNRNPC-230ENST00000557201 GOLGA6L22H0YM25 854 aa11.48□□□□□ -0.57
HNRNPC-230ENST00000557201 RIOK3O14730 519 aaKnown RBP11.48□□□□□ -0.57
HNRNPC-230ENST00000557201 HUS1O60921 280 aa11.48□□□□□ -0.57
HNRNPC-230ENST00000557201 LDHAP00338 332 aaKnown RBP11.48□□□□□ -0.57
HNRNPC-230ENST00000557201 MYL1P05976 194 aa11.48□□□□□ -0.57
HNRNPC-230ENST00000557201 TCF3P15923 654 aa11.48□□□□□ -0.57
HNRNPC-230ENST00000557201 PMLP29590 882 aa11.48□□□□□ -0.57
HNRNPC-230ENST00000557201 MAGEA11P43364 429 aa11.48□□□□□ -0.57
HNRNPC-230ENST00000557201 ZXDBP98169 803 aa11.48□□□□□ -0.57
HNRNPC-230ENST00000557201 AMPD2Q01433 879 aa11.48□□□□□ -0.57
HNRNPC-230ENST00000557201 MYL7Q01449 175 aa11.48□□□□□ -0.57
HNRNPC-230ENST00000557201 CCDC6Q16204 474 aa11.48□□□□□ -0.57
HNRNPC-230ENST00000557201 EML3Q32P44 896 aa11.48□□□□□ -0.57
HNRNPC-230ENST00000557201 PLK5Q496M5 336 aa11.48□□□□□ -0.57
HNRNPC-230ENST00000557201 FBXO43Q4G163 708 aa11.48□□□□□ -0.57
HNRNPC-230ENST00000557201 CC2D1AQ6P1N0 951 aaPredicted RBP11.48□□□□□ -0.57
HNRNPC-230ENST00000557201 SYT13Q7L8C5 426 aa11.48□□□□□ -0.57
HNRNPC-230ENST00000557201 CEP57L1Q8IYX8 460 aa11.48□□□□□ -0.57
HNRNPC-230ENST00000557201 CACTINQ8WUQ7 758 aaKnown RBP11.48□□□□□ -0.57
HNRNPC-230ENST00000557201 KBTBD7Q8WVZ9 684 aa11.48□□□□□ -0.57
HNRNPC-230ENST00000557201 DDX1Q92499 740 aaKnown RBP11.48□□□□□ -0.57
HNRNPC-230ENST00000557201 FUBP3Q96I24 572 aaKnown RBP eCLIP11.48□□□□□ -0.579e-8■■□□□ 14.1
HNRNPC-230ENST00000557201 TIGD1Q96MW7 591 aa11.48□□□□□ -0.57
HNRNPC-230ENST00000557201 DUSP15Q9H1R2 295 aaPredicted RBP11.48□□□□□ -0.57
HNRNPC-230ENST00000557201 PDE11AQ9HCR9 933 aa11.48□□□□□ -0.57
HNRNPC-230ENST00000557201 LMBRD1Q9NUN5 540 aa11.48□□□□□ -0.57
HNRNPC-230ENST00000557201 EBF1Q9UH73 591 aa11.48□□□□□ -0.57
HNRNPC-230ENST00000557201 SLC8A2Q9UPR5 921 aa11.48□□□□□ -0.57
HNRNPC-230ENST00000557201 PCDHB13Q9Y5F0 798 aa11.48□□□□□ -0.57
HNRNPC-230ENST00000557201 SNX9Q9Y5X1 595 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms