RNA–Protein interactions for RNA: ENST00000557076.5

SCFD1-223, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 743 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-223ENST00000557076 MTAPQ13126 283 aa5.35□□□□□ -1.55
SCFD1-223ENST00000557076 PPP2R5DQ14738 602 aa5.35□□□□□ -1.55
SCFD1-223ENST00000557076 KIR3DS1Q14943 382 aa5.35□□□□□ -1.55
SCFD1-223ENST00000557076 UBXN2BQ14CS0 331 aa5.35□□□□□ -1.55
SCFD1-223ENST00000557076 PLCB4Q15147 1175 aa5.35□□□□□ -1.55
SCFD1-223ENST00000557076 MLF2Q15773 248 aaPredicted RBP5.35□□□□□ -1.55
SCFD1-223ENST00000557076 VMACQ2NL98 169 aa5.35□□□□□ -1.55
SCFD1-223ENST00000557076 CLLU1OSQ5K130 101 aa5.35□□□□□ -1.55
SCFD1-223ENST00000557076 VPS53Q5VIR6 699 aa5.35□□□□□ -1.55
SCFD1-223ENST00000557076 IQCA1Q86XH1 822 aa5.35□□□□□ -1.55
SCFD1-223ENST00000557076 TICAM2Q86XR7 235 aa5.35□□□□□ -1.55
SCFD1-223ENST00000557076 GPRASP2Q96D09 838 aa5.35□□□□□ -1.55
SCFD1-223ENST00000557076 RPP25Q9BUL9 199 aaKnown RBP5.35□□□□□ -1.55
SCFD1-223ENST00000557076 NT5C3AQ9H0P0 336 aa5.35□□□□□ -1.55
SCFD1-223ENST00000557076 PLEKHA4Q9H4M7 779 aa5.35□□□□□ -1.55
SCFD1-223ENST00000557076 RNF41Q9H4P4 317 aaPredicted RBP5.35□□□□□ -1.55
SCFD1-223ENST00000557076 KAT14Q9H8E8 782 aa5.35□□□□□ -1.55
SCFD1-223ENST00000557076 LTB4R2Q9NPC1 389 aa5.35□□□□□ -1.55
SCFD1-223ENST00000557076 GFOD1Q9NXC2 390 aa5.35□□□□□ -1.55
SCFD1-223ENST00000557076 WASF3Q9UPY6 502 aa5.35□□□□□ -1.55
SCFD1-223ENST00000557076 GINS2Q9Y248 185 aa5.35□□□□□ -1.55
SCFD1-223ENST00000557076 MRPS17Q9Y2R5 130 aaKnown RBP5.35□□□□□ -1.55
SCFD1-223ENST00000557076 NUMBLQ9Y6R0 609 aa5.35□□□□□ -1.55
SCFD1-223ENST00000557076 CLUHO75153 1309 aa5.34□□□□□ -1.55
SCFD1-223ENST00000557076 MEIS3P2A8K0S8 358 aa5.34□□□□□ -1.55
SCFD1-223ENST00000557076 MEIS1O00470 390 aa5.34□□□□□ -1.55
SCFD1-223ENST00000557076 KCNK5O95279 499 aa5.34□□□□□ -1.55
SCFD1-223ENST00000557076 ALDH2P05091 517 aa5.34□□□□□ -1.55
SCFD1-223ENST00000557076 GSNP06396 782 aa5.34□□□□□ -1.55
SCFD1-223ENST00000557076 ZNF806P0C7X5 589 aa5.34□□□□□ -1.55
SCFD1-223ENST00000557076 VAV1P15498 845 aa5.34□□□□□ -1.55
SCFD1-223ENST00000557076 PFKLP17858 780 aa5.34□□□□□ -1.55
SCFD1-223ENST00000557076 CTSKP43235 329 aa5.34□□□□□ -1.55
SCFD1-223ENST00000557076 MAPKAPK2P49137 400 aa5.34□□□□□ -1.55
SCFD1-223ENST00000557076 ZNF165P49910 485 aa5.34□□□□□ -1.55
SCFD1-223ENST00000557076 ADCY1Q08828 1119 aa5.34□□□□□ -1.55
SCFD1-223ENST00000557076 SIM2Q14190 667 aaPredicted RBP5.34□□□□□ -1.55
SCFD1-223ENST00000557076 LPAL2Q16609 132 aa5.34□□□□□ -1.55
SCFD1-223ENST00000557076 TSSK4Q6SA08 328 aa5.34□□□□□ -1.55
SCFD1-223ENST00000557076 RPTNQ6XPR3 784 aa5.34□□□□□ -1.55
SCFD1-223ENST00000557076 ZNF852Q6ZMS4 543 aa5.34□□□□□ -1.55
SCFD1-223ENST00000557076 MTSS1LQ765P7 747 aa5.34□□□□□ -1.55
SCFD1-223ENST00000557076 FAM228AQ86W67 206 aa5.34□□□□□ -1.55
SCFD1-223ENST00000557076 TMEM173Q86WV6 379 aaPredicted RBP5.34□□□□□ -1.55
SCFD1-223ENST00000557076 TRAPPC12Q8WVT3 735 aa5.34□□□□□ -1.55
SCFD1-223ENST00000557076 SMG7Q92540 1137 aaKnown RBP5.34□□□□□ -1.55
SCFD1-223ENST00000557076 ZNF707Q96C28 371 aaPredicted RBP5.34□□□□□ -1.55
SCFD1-223ENST00000557076 SLC6A18Q96N87 628 aa5.34□□□□□ -1.55
SCFD1-223ENST00000557076 IER2Q9BTL4 223 aa5.34□□□□□ -1.55
SCFD1-223ENST00000557076 CHMP4BQ9H444 224 aaKnown RBP5.34□□□□□ -1.55
SCFD1-223ENST00000557076 RIOX1Q9H6W3 641 aa5.34□□□□□ -1.55
SCFD1-223ENST00000557076 MRPL17Q9NRX2 175 aaKnown RBP5.34□□□□□ -1.55
SCFD1-223ENST00000557076 HELLSQ9NRZ9 838 aa5.34□□□□□ -1.55
SCFD1-223ENST00000557076 AP5S1Q9NUS5 200 aa5.34□□□□□ -1.55
SCFD1-223ENST00000557076 IMPACTQ9P2X3 320 aa5.34□□□□□ -1.55
SCFD1-223ENST00000557076 SSX2IPQ9Y2D8 614 aa5.34□□□□□ -1.55
SCFD1-223ENST00000557076 WDFY3Q8IZQ1 3526 aa5.34□□□□□ -1.55
SCFD1-223ENST00000557076 PLXNA4Q9HCM2 1894 aa5.34□□□□□ -1.55
SCFD1-223ENST00000557076 ZMYM6O95789 1325 aa5.33□□□□□ -1.56
SCFD1-223ENST00000557076 TTC41PQ6P2S7 1318 aa5.33□□□□□ -1.56
SCFD1-223ENST00000557076 IGKV6D-21A0A0A0MT36 114 aa5.33□□□□□ -1.56
SCFD1-223ENST00000557076 A0A1W2PQ27 194 aa5.33□□□□□ -1.56
SCFD1-223ENST00000557076 A0A1W2PQ64 194 aa5.33□□□□□ -1.56
SCFD1-223ENST00000557076 A0A1W2PQC6 194 aa5.33□□□□□ -1.56
SCFD1-223ENST00000557076 A0A1W2PQD8 194 aa5.33□□□□□ -1.56
SCFD1-223ENST00000557076 MEIS2O14770 477 aa5.33□□□□□ -1.56
SCFD1-223ENST00000557076 INPPL1O15357 1258 aa5.33□□□□□ -1.56
SCFD1-223ENST00000557076 ZNF623O75123 536 aa5.33□□□□□ -1.56
SCFD1-223ENST00000557076 ZC3H11AO75152 810 aaKnown RBP eCLIP5.33□□□□□ -1.56
SCFD1-223ENST00000557076 CD72P21854 359 aa5.33□□□□□ -1.56
SCFD1-223ENST00000557076 AUHQ13825 339 aaKnown RBP5.33□□□□□ -1.56
SCFD1-223ENST00000557076 KIZQ2M2Z5 673 aa5.33□□□□□ -1.56
SCFD1-223ENST00000557076 PLEKHN1Q494U1 663 aaPredicted RBP5.33□□□□□ -1.56
SCFD1-223ENST00000557076 SPATS1Q496A3 300 aa5.33□□□□□ -1.56
SCFD1-223ENST00000557076 MCMDC2Q4G0Z9 681 aa5.33□□□□□ -1.56
SCFD1-223ENST00000557076 SEZ6Q53EL9 994 aa5.33□□□□□ -1.56
SCFD1-223ENST00000557076 SOWAHCQ53LP3 525 aaPredicted RBP5.33□□□□□ -1.56
SCFD1-223ENST00000557076 ZNF484Q5JVG2 852 aa5.33□□□□□ -1.56
SCFD1-223ENST00000557076 STPG1Q5TH74 334 aa5.33□□□□□ -1.56
SCFD1-223ENST00000557076 HLA-DQA1Q5Y7H0 255 aa5.33□□□□□ -1.56
SCFD1-223ENST00000557076 TSHZ3Q63HK5 1081 aa5.33□□□□□ -1.56
SCFD1-223ENST00000557076 PARM1Q6UWI2 310 aa5.33□□□□□ -1.56
SCFD1-223ENST00000557076 GK5Q6ZS86 529 aa5.33□□□□□ -1.56
SCFD1-223ENST00000557076 HS2ST1Q7LGA3 356 aa5.33□□□□□ -1.56
SCFD1-223ENST00000557076 GPR65Q8IYL9 337 aa5.33□□□□□ -1.56
SCFD1-223ENST00000557076 ENAHQ8N8S7 591 aaPredicted RBP5.33□□□□□ -1.56
SCFD1-223ENST00000557076 FGF14Q92915 247 aa5.33□□□□□ -1.56
SCFD1-223ENST00000557076 PHKBQ93100 1093 aa5.33□□□□□ -1.56
SCFD1-223ENST00000557076 LOXL4Q96JB6 756 aa5.33□□□□□ -1.56
SCFD1-223ENST00000557076 DHRS1Q96LJ7 313 aa5.33□□□□□ -1.56
SCFD1-223ENST00000557076 RPS6KC1Q96S38 1066 aa5.33□□□□□ -1.56
SCFD1-223ENST00000557076 DSCC1Q9BVC3 393 aa5.33□□□□□ -1.56
SCFD1-223ENST00000557076 VN1R3Q9BXE9 311 aa5.33□□□□□ -1.56
SCFD1-223ENST00000557076 NRDE2Q9H7Z3 1164 aa5.33□□□□□ -1.56
SCFD1-223ENST00000557076 RXFP1Q9HBX9 757 aa5.33□□□□□ -1.56
SCFD1-223ENST00000557076 MAN1C1Q9NR34 630 aa5.33□□□□□ -1.56
SCFD1-223ENST00000557076 CHST12Q9NRB3 414 aa5.33□□□□□ -1.56
SCFD1-223ENST00000557076 IGSF5Q9NSI5 407 aa5.33□□□□□ -1.56
SCFD1-223ENST00000557076 ZDHHC7Q9NXF8 308 aa5.33□□□□□ -1.56
SCFD1-223ENST00000557076 DACT1Q9NYF0 836 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms