RNA–Protein interactions for RNA: ENST00000557037.5

PSEN1-220, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-220ENST00000557037 TARS2Q9BW92 718 aaKnown RBP13.56□□□□□ -0.24
PSEN1-220ENST00000557037 ZDHHC5Q9C0B5 715 aa13.56□□□□□ -0.24
PSEN1-220ENST00000557037 PTPRHQ9HD43 1115 aa13.56□□□□□ -0.24
PSEN1-220ENST00000557037 CREBBPQ92793 2442 aa13.56□□□□□ -0.24
PSEN1-220ENST00000557037 ABCA12Q86UK0 2595 aa13.56□□□□□ -0.24
PSEN1-220ENST00000557037 MYOFQ9NZM1 2061 aa13.55□□□□□ -0.24
PSEN1-220ENST00000557037 MYMKA6NI61 221 aa13.55□□□□□ -0.24
PSEN1-220ENST00000557037 E9PAM4 449 aa13.55□□□□□ -0.24
PSEN1-220ENST00000557037 K7ERI5 159 aa13.55□□□□□ -0.24
PSEN1-220ENST00000557037 PPEF2O14830 753 aa13.55□□□□□ -0.24
PSEN1-220ENST00000557037 KAT7O95251 611 aa13.55□□□□□ -0.24
PSEN1-220ENST00000557037 APODP05090 189 aa13.55□□□□□ -0.24
PSEN1-220ENST00000557037 USP17L7P0C7H9 530 aa13.55□□□□□ -0.24
PSEN1-220ENST00000557037 HAPLN1P10915 354 aaPredicted RBP13.55□□□□□ -0.24
PSEN1-220ENST00000557037 XRCC6P12956 609 aaKnown RBP eCLIP13.55□□□□□ -0.24
PSEN1-220ENST00000557037 TYMPP19971 482 aa13.55□□□□□ -0.24
PSEN1-220ENST00000557037 WASP42768 502 aa13.55□□□□□ -0.24
PSEN1-220ENST00000557037 KIR2DL1P43626 348 aaPredicted RBP13.55□□□□□ -0.24
PSEN1-220ENST00000557037 AARSP49588 968 aaKnown RBP eCLIP13.55□□□□□ -0.24
PSEN1-220ENST00000557037 CCDC173Q0VFZ6 552 aa13.55□□□□□ -0.24
PSEN1-220ENST00000557037 PPP2R5AQ15172 486 aa13.55□□□□□ -0.24
PSEN1-220ENST00000557037 SLC10A6Q3KNW5 377 aa13.55□□□□□ -0.24
PSEN1-220ENST00000557037 SYCP2LQ5T4T6 812 aa13.55□□□□□ -0.24
PSEN1-220ENST00000557037 ZCCHC9Q8N567 271 aaKnown RBP13.55□□□□□ -0.24
PSEN1-220ENST00000557037 IFT74Q96LB3 600 aa13.55□□□□□ -0.24
PSEN1-220ENST00000557037 PNKPQ96T60 521 aa13.55□□□□□ -0.24
PSEN1-220ENST00000557037 PI4K2AQ9BTU6 479 aa13.55□□□□□ -0.24
PSEN1-220ENST00000557037 CD93Q9NPY3 652 aa13.55□□□□□ -0.24
PSEN1-220ENST00000557037 ABI2Q9NYB9 513 aaPredicted RBP13.55□□□□□ -0.24
PSEN1-220ENST00000557037 NID2Q14112 1375 aa13.55□□□□□ -0.24
PSEN1-220ENST00000557037 TRAV19A0A0A6YYK7 116 aa13.54□□□□□ -0.24
PSEN1-220ENST00000557037 SCAMP3O14828 347 aaKnown RBP13.54□□□□□ -0.24
PSEN1-220ENST00000557037 NDUFS2O75306 463 aa13.54□□□□□ -0.24
PSEN1-220ENST00000557037 TADA3O75528 432 aa13.54□□□□□ -0.24
PSEN1-220ENST00000557037 CYP17A1P05093 508 aa13.54□□□□□ -0.24
PSEN1-220ENST00000557037 MCF2P10911 925 aa13.54□□□□□ -0.24
PSEN1-220ENST00000557037 CYP11B2P19099 503 aa13.54□□□□□ -0.24
PSEN1-220ENST00000557037 IL12RB1P42701 662 aa13.54□□□□□ -0.24
PSEN1-220ENST00000557037 TLE3Q04726 772 aa13.54□□□□□ -0.24
PSEN1-220ENST00000557037 SSRP1Q08945 709 aaKnown RBP13.54□□□□□ -0.24
PSEN1-220ENST00000557037 HLA-BQ31612 363 aa13.54□□□□□ -0.24
PSEN1-220ENST00000557037 HSF5Q4G112 596 aaPredicted RBP13.54□□□□□ -0.24
PSEN1-220ENST00000557037 PIK3AP1Q6ZUJ8 805 aa13.54□□□□□ -0.24
PSEN1-220ENST00000557037 LRRTM3Q86VH5 581 aa13.54□□□□□ -0.24
PSEN1-220ENST00000557037 TRIM22Q8IYM9 498 aa13.54□□□□□ -0.24
PSEN1-220ENST00000557037 ARL14EPQ8N8R7 260 aaPredicted RBP13.54□□□□□ -0.24
PSEN1-220ENST00000557037 SPATA18Q8TC71 538 aa13.54□□□□□ -0.24
PSEN1-220ENST00000557037 BAP1Q92560 729 aa13.54□□□□□ -0.24
PSEN1-220ENST00000557037 ZNF419Q96HQ0 510 aaPredicted RBP13.54□□□□□ -0.24
PSEN1-220ENST00000557037 ZBTB45Q96K62 511 aaPredicted RBP13.54□□□□□ -0.24
PSEN1-220ENST00000557037 TRIM4Q9C037 500 aa13.54□□□□□ -0.24
PSEN1-220ENST00000557037 ZCWPW1Q9H0M4 648 aa13.54□□□□□ -0.24
PSEN1-220ENST00000557037 MIR1-1HGQ9H1L0 117 aa13.54□□□□□ -0.24
PSEN1-220ENST00000557037 PCDHA12Q9UN75 941 aa13.54□□□□□ -0.24
PSEN1-220ENST00000557037 A0A1B0GTW7 788 aa13.53□□□□□ -0.24
PSEN1-220ENST00000557037 FAM205CA6NFA0 338 aa13.53□□□□□ -0.24
PSEN1-220ENST00000557037 FLRT2O43155 660 aa13.53□□□□□ -0.24
PSEN1-220ENST00000557037 CER1O95813 267 aa13.53□□□□□ -0.24
PSEN1-220ENST00000557037 ZNF883P0CG24 379 aa13.53□□□□□ -0.24
PSEN1-220ENST00000557037 SPATA31C1P0DKV0 1188 aa13.53□□□□□ -0.24
PSEN1-220ENST00000557037 ODC1P11926 461 aa13.53□□□□□ -0.24
PSEN1-220ENST00000557037 C6P13671 934 aa13.53□□□□□ -0.24
PSEN1-220ENST00000557037 LRPAP1P30533 357 aa13.53□□□□□ -0.24
PSEN1-220ENST00000557037 MATKP42679 507 aa13.53□□□□□ -0.24
PSEN1-220ENST00000557037 CSRP3P50461 194 aa13.53□□□□□ -0.24
PSEN1-220ENST00000557037 BNC1Q01954 994 aa13.53□□□□□ -0.24
PSEN1-220ENST00000557037 PREPLQ4J6C6 727 aaPredicted RBP13.53□□□□□ -0.24
PSEN1-220ENST00000557037 WDR45BQ5MNZ6 344 aa13.53□□□□□ -0.24
PSEN1-220ENST00000557037 GALNT17Q6IS24 598 aa13.53□□□□□ -0.24
PSEN1-220ENST00000557037 PRICKLE2Q7Z3G6 844 aa13.53□□□□□ -0.24
PSEN1-220ENST00000557037 C12orf40Q86WS4 652 aa13.53□□□□□ -0.24
PSEN1-220ENST00000557037 LRRC15Q8TF66 581 aa13.53□□□□□ -0.24
PSEN1-220ENST00000557037 SENP8Q96LD8 212 aa13.53□□□□□ -0.24
PSEN1-220ENST00000557037 TMEM206Q9H813 350 aa13.53□□□□□ -0.24
PSEN1-220ENST00000557037 TTC12Q9H892 705 aaPredicted RBP13.53□□□□□ -0.24
PSEN1-220ENST00000557037 ARHGEF4Q9NR80 690 aa13.53□□□□□ -0.24
PSEN1-220ENST00000557037 TSC2P49815 1807 aa13.53□□□□□ -0.24
PSEN1-220ENST00000557037 DOPEY1Q5JWR5 2465 aa13.52□□□□□ -0.24
PSEN1-220ENST00000557037 ARHGEF35A5YM69 484 aa13.52□□□□□ -0.25
PSEN1-220ENST00000557037 CCDC169A6NNP5 214 aa13.52□□□□□ -0.25
PSEN1-220ENST00000557037 MEI4A8MW99 385 aa13.52□□□□□ -0.25
PSEN1-220ENST00000557037 BTBD18B2RXH4 712 aa13.52□□□□□ -0.25
PSEN1-220ENST00000557037 ABLIM1O14639 778 aa13.52□□□□□ -0.25
PSEN1-220ENST00000557037 TNFSF14O43557 240 aa13.52□□□□□ -0.25
PSEN1-220ENST00000557037 CXCL8P10145 99 aa13.52□□□□□ -0.25
PSEN1-220ENST00000557037 JUPP14923 745 aa13.52□□□□□ -0.25
PSEN1-220ENST00000557037 C6orf118Q5T5N4 469 aa13.52□□□□□ -0.25
PSEN1-220ENST00000557037 SPACA3Q8IXA5 215 aa13.52□□□□□ -0.25
PSEN1-220ENST00000557037 OXER1Q8TDS5 423 aa13.52□□□□□ -0.25
PSEN1-220ENST00000557037 NAP1L4Q99733 375 aaKnown RBP13.52□□□□□ -0.25
PSEN1-220ENST00000557037 MRPL4Q9BYD3 311 aaKnown RBP13.52□□□□□ -0.25
PSEN1-220ENST00000557037 SLC6A17Q9H1V8 727 aa13.52□□□□□ -0.25
PSEN1-220ENST00000557037 ANK1P16157 1881 aa13.52□□□□□ -0.25
PSEN1-220ENST00000557037 STK36Q9NRP7 1315 aa13.51□□□□□ -0.25
PSEN1-220ENST00000557037 C2orf78A6NCI8 922 aa13.51□□□□□ -0.25
PSEN1-220ENST00000557037 MED24O75448 989 aa13.51□□□□□ -0.25
PSEN1-220ENST00000557037 CSH1P0DML2 217 aa13.51□□□□□ -0.25
PSEN1-220ENST00000557037 CSH2P0DML3 217 aa13.51□□□□□ -0.25
PSEN1-220ENST00000557037 HOXB2P14652 356 aa13.51□□□□□ -0.25
PSEN1-220ENST00000557037 NDUFV2P19404 249 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms