RNA–Protein interactions for RNA: ENST00000556973.1

LINC00239-201, long intergenic non-protein coding RNA 239, humanhuman

TSL 3 BASIC

Gene LINC00239, Length 639 nt, Biotype lincRNA, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00239-201ENST00000556973 ZSWIM3Q96MP5 696 aa11.36□□□□□ -0.59
LINC00239-201ENST00000556973 NT5C1BQ96P26 610 aa11.36□□□□□ -0.59
LINC00239-201ENST00000556973 GCNAQ96QF7 691 aa11.36□□□□□ -0.59
LINC00239-201ENST00000556973 MED10Q9BTT4 135 aa11.36□□□□□ -0.59
LINC00239-201ENST00000556973 IL21Q9HBE4 155 aa11.36□□□□□ -0.59
LINC00239-201ENST00000556973 ZFP14Q9HCL3 533 aa11.36□□□□□ -0.59
LINC00239-201ENST00000556973 ZMYM5Q9UJ78 669 aa11.36□□□□□ -0.59
LINC00239-201ENST00000556973 MAGED2Q9UNF1 606 aaPredicted RBP11.36□□□□□ -0.59
LINC00239-201ENST00000556973 NUMBLQ9Y6R0 609 aa11.36□□□□□ -0.59
LINC00239-201ENST00000556973 OBSL1O75147 1896 aa11.36□□□□□ -0.59
LINC00239-201ENST00000556973 PRKCSHP14314 528 aaPredicted RBP11.35□□□□□ -0.59
LINC00239-201ENST00000556973 WEE1P30291 646 aa11.35□□□□□ -0.59
LINC00239-201ENST00000556973 MTIF2P46199 727 aaKnown RBP11.35□□□□□ -0.59
LINC00239-201ENST00000556973 YWHAEP62258 255 aaKnown RBP11.35□□□□□ -0.59
LINC00239-201ENST00000556973 LRMPQ12912 555 aa11.35□□□□□ -0.59
LINC00239-201ENST00000556973 ORC1Q13415 861 aa11.35□□□□□ -0.59
LINC00239-201ENST00000556973 CUL2Q13617 745 aa11.35□□□□□ -0.59
LINC00239-201ENST00000556973 ZNF394Q53GI3 561 aa11.35□□□□□ -0.59
LINC00239-201ENST00000556973 FAM78AQ5JUQ0 283 aa11.35□□□□□ -0.59
LINC00239-201ENST00000556973 GPR158Q5T848 1215 aa11.35□□□□□ -0.59
LINC00239-201ENST00000556973 TRIM67Q6ZTA4 783 aa11.35□□□□□ -0.59
LINC00239-201ENST00000556973 DENND5BQ6ZUT9 1274 aa11.35□□□□□ -0.59
LINC00239-201ENST00000556973 FUKQ8N0W3 1084 aa11.35□□□□□ -0.59
LINC00239-201ENST00000556973 C12orf29Q8N999 325 aa11.35□□□□□ -0.59
LINC00239-201ENST00000556973 ZSCAN18Q8TBC5 510 aaPredicted RBP11.35□□□□□ -0.59
LINC00239-201ENST00000556973 SMARCD2Q92925 531 aa11.35□□□□□ -0.59
LINC00239-201ENST00000556973 E2F7Q96AV8 911 aa11.35□□□□□ -0.59
LINC00239-201ENST00000556973 SMARCD1Q96GM5 515 aa11.35□□□□□ -0.59
LINC00239-201ENST00000556973 TMEM176AQ96HP8 235 aa11.35□□□□□ -0.59
LINC00239-201ENST00000556973 HEXIM2Q96MH2 286 aaKnown RBP11.35□□□□□ -0.59
LINC00239-201ENST00000556973 ASB16Q96NS5 453 aa11.35□□□□□ -0.59
LINC00239-201ENST00000556973 TWNKQ96RR1 684 aa11.35□□□□□ -0.59
LINC00239-201ENST00000556973 HNRNPABQ99729 332 aaKnown RBP11.35□□□□□ -0.59
LINC00239-201ENST00000556973 RPP25Q9BUL9 199 aaKnown RBP11.35□□□□□ -0.59
LINC00239-201ENST00000556973 ZNF518BQ9C0D4 1074 aa11.35□□□□□ -0.59
LINC00239-201ENST00000556973 TASP1Q9H6P5 420 aa11.35□□□□□ -0.59
LINC00239-201ENST00000556973 TRPV4Q9HBA0 871 aa11.35□□□□□ -0.59
LINC00239-201ENST00000556973 CSNK1G1Q9HCP0 422 aa11.35□□□□□ -0.59
LINC00239-201ENST00000556973 TMEM63CQ9P1W3 806 aa11.35□□□□□ -0.59
LINC00239-201ENST00000556973 HMGXB4Q9UGU5 601 aa11.35□□□□□ -0.59
LINC00239-201ENST00000556973 DUSP12Q9UNI6 340 aa11.35□□□□□ -0.59
LINC00239-201ENST00000556973 NUP210Q8TEM1 1887 aaPredicted RBP11.35□□□□□ -0.59
LINC00239-201ENST00000556973 MYH10P35580 1976 aa11.35□□□□□ -0.59
LINC00239-201ENST00000556973 ZNF638Q14966 1978 aaKnown RBP11.34□□□□□ -0.59
LINC00239-201ENST00000556973 F8VP50 259 aa11.34□□□□□ -0.59
LINC00239-201ENST00000556973 NRG2O14511 850 aaPredicted RBP11.34□□□□□ -0.59
LINC00239-201ENST00000556973 LETM1O95202 739 aaPredicted RBP11.34□□□□□ -0.59
LINC00239-201ENST00000556973 SRFP11831 508 aa11.34□□□□□ -0.59
LINC00239-201ENST00000556973 DDX6P26196 483 aaKnown RBP eCLIP11.34□□□□□ -0.59
LINC00239-201ENST00000556973 PPP3CCP48454 512 aa11.34□□□□□ -0.59
LINC00239-201ENST00000556973 RAD23BP54727 409 aa11.34□□□□□ -0.59
LINC00239-201ENST00000556973 STX1AQ16623 288 aa11.34□□□□□ -0.59
LINC00239-201ENST00000556973 MAN2A1Q16706 1144 aa11.34□□□□□ -0.59
LINC00239-201ENST00000556973 TMEM31Q5JXX7 168 aa11.34□□□□□ -0.59
LINC00239-201ENST00000556973 TANGO2Q6ICL3 276 aa11.34□□□□□ -0.59
LINC00239-201ENST00000556973 BMP8AQ7Z5Y6 402 aa11.34□□□□□ -0.59
LINC00239-201ENST00000556973 TMEM150AQ86TG1 271 aa11.34□□□□□ -0.59
LINC00239-201ENST00000556973 FAM35AQ86V20 835 aa11.34□□□□□ -0.59
LINC00239-201ENST00000556973 NUP93Q8N1F7 819 aa11.34□□□□□ -0.59
LINC00239-201ENST00000556973 PPM1KQ8N3J5 372 aa11.34□□□□□ -0.59
LINC00239-201ENST00000556973 STKLD1Q8NE28 680 aa11.34□□□□□ -0.59
LINC00239-201ENST00000556973 SLC2A14Q8TDB8 520 aa11.34□□□□□ -0.59
LINC00239-201ENST00000556973 MRPS31Q92665 395 aaKnown RBP11.34□□□□□ -0.59
LINC00239-201ENST00000556973 FAM81BQ96LP2 452 aa11.34□□□□□ -0.59
LINC00239-201ENST00000556973 KCNK16Q96T55 309 aa11.34□□□□□ -0.59
LINC00239-201ENST00000556973 ARID3AQ99856 593 aa11.34□□□□□ -0.59
LINC00239-201ENST00000556973 SLC46A2Q9BY10 475 aa11.34□□□□□ -0.59
LINC00239-201ENST00000556973 SMOC2Q9H3U7 446 aa11.34□□□□□ -0.59
LINC00239-201ENST00000556973 SLITRK6Q9H5Y7 841 aa11.34□□□□□ -0.59
LINC00239-201ENST00000556973 COMMD8Q9NX08 183 aa11.34□□□□□ -0.59
LINC00239-201ENST00000556973 WNT16Q9UBV4 365 aa11.34□□□□□ -0.59
LINC00239-201ENST00000556973 KIAA1257Q9ULG3 409 aa11.34□□□□□ -0.59
LINC00239-201ENST00000556973 ANAPC1Q9H1A4 1944 aa11.33□□□□□ -0.6
LINC00239-201ENST00000556973 GTPBP10A4D1E9 387 aaKnown RBP11.33□□□□□ -0.6
LINC00239-201ENST00000556973 TMEM221A6NGB7 291 aa11.33□□□□□ -0.6
LINC00239-201ENST00000556973 PRR33A8MZF0 331 aa11.33□□□□□ -0.6
LINC00239-201ENST00000556973 KCNJ18B7U540 433 aa11.33□□□□□ -0.6
LINC00239-201ENST00000556973 M0R296 226 aa11.33□□□□□ -0.6
LINC00239-201ENST00000556973 NARSO43776 548 aaKnown RBP11.33□□□□□ -0.6
LINC00239-201ENST00000556973 AP1G2O75843 785 aa11.33□□□□□ -0.6
LINC00239-201ENST00000556973 RTN3O95197 1032 aaPredicted RBP11.33□□□□□ -0.6
LINC00239-201ENST00000556973 CCDC130P13994 396 aa11.33□□□□□ -0.6
LINC00239-201ENST00000556973 FCARP24071 287 aa11.33□□□□□ -0.6
LINC00239-201ENST00000556973 EEF1GP26641 437 aaKnown RBP11.33□□□□□ -0.6
LINC00239-201ENST00000556973 YWHAQP27348 245 aa11.33□□□□□ -0.6
LINC00239-201ENST00000556973 CACNA2D1P54289 1103 aa11.33□□□□□ -0.6
LINC00239-201ENST00000556973 GPC5P78333 572 aa11.33□□□□□ -0.6
LINC00239-201ENST00000556973 CYP4F8P98187 520 aa11.33□□□□□ -0.6
LINC00239-201ENST00000556973 GCNT1Q02742 428 aa11.33□□□□□ -0.6
LINC00239-201ENST00000556973 KCNJ12Q14500 433 aa11.33□□□□□ -0.6
LINC00239-201ENST00000556973 KLHL40Q2TBA0 621 aa11.33□□□□□ -0.6
LINC00239-201ENST00000556973 VWA3BQ502W6 1294 aa11.33□□□□□ -0.6
LINC00239-201ENST00000556973 TCP11X2Q5H9J9 407 aa11.33□□□□□ -0.6
LINC00239-201ENST00000556973 STXBP5Q5T5C0 1151 aa11.33□□□□□ -0.6
LINC00239-201ENST00000556973 PPP1R26Q5T8A7 1209 aaPredicted RBP11.33□□□□□ -0.6
LINC00239-201ENST00000556973 CAVIN1Q6NZI2 390 aaKnown RBP11.33□□□□□ -0.6
LINC00239-201ENST00000556973 GBP6Q6ZN66 633 aa11.33□□□□□ -0.6
LINC00239-201ENST00000556973 MON1AQ86VX9 555 aa11.33□□□□□ -0.6
LINC00239-201ENST00000556973 ARID3BQ8IVW6 561 aaPredicted RBP11.33□□□□□ -0.6
LINC00239-201ENST00000556973 SLC4A11Q8NBS3 891 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms