RNA–Protein interactions for RNA: ENST00000556680.1

TRAV15-201, Transcript of T cell receptor alpha variable 15 (pseudogene), humanhuman

BASIC

Gene TRAV15, Length 249 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV15-201ENST00000556680 PTPRHQ9HD43 1115 aa4.99□□□□□ -1.61
TRAV15-201ENST00000556680 TBC1D23Q9NUY8 699 aa4.99□□□□□ -1.61
TRAV15-201ENST00000556680 CDC23Q9UJX2 597 aa4.99□□□□□ -1.61
TRAV15-201ENST00000556680 HDAC9Q9UKV0 1011 aa4.99□□□□□ -1.61
TRAV15-201ENST00000556680 KNSTRNQ9Y448 316 aa4.99□□□□□ -1.61
TRAV15-201ENST00000556680 METP08581 1390 aa4.99□□□□□ -1.61
TRAV15-201ENST00000556680 NRKQ7Z2Y5 1582 aa4.99□□□□□ -1.61
TRAV15-201ENST00000556680 RGPD5Q99666 1765 aa4.99□□□□□ -1.61
TRAV15-201ENST00000556680 XDHP47989 1333 aa4.98□□□□□ -1.61
TRAV15-201ENST00000556680 NPHP4O75161 1426 aaPredicted RBP4.98□□□□□ -1.61
TRAV15-201ENST00000556680 A0A087WWL8 130 aa4.98□□□□□ -1.61
TRAV15-201ENST00000556680 LOC100996750A0A140TA64 210 aa4.98□□□□□ -1.61
TRAV15-201ENST00000556680 PATE3B3GLJ2 98 aa4.98□□□□□ -1.61
TRAV15-201ENST00000556680 TMEM233B4DJY2 109 aa4.98□□□□□ -1.61
TRAV15-201ENST00000556680 E9PLN8 166 aa4.98□□□□□ -1.61
TRAV15-201ENST00000556680 LEFTY2O00292 366 aa4.98□□□□□ -1.61
TRAV15-201ENST00000556680 ERN1O75460 977 aaKnown RBP4.98□□□□□ -1.61
TRAV15-201ENST00000556680 TCEA3O75764 348 aa4.98□□□□□ -1.61
TRAV15-201ENST00000556680 CYP2C9P11712 490 aa4.98□□□□□ -1.61
TRAV15-201ENST00000556680 HARSP12081 509 aaKnown RBP4.98□□□□□ -1.61
TRAV15-201ENST00000556680 FCER1AP12319 257 aa4.98□□□□□ -1.61
TRAV15-201ENST00000556680 APOBEC3AP31941 199 aaPredicted RBP4.98□□□□□ -1.61
TRAV15-201ENST00000556680 PPM1AP35813 382 aa4.98□□□□□ -1.61
TRAV15-201ENST00000556680 TECP42680 631 aa4.98□□□□□ -1.61
TRAV15-201ENST00000556680 TRAPPC10P48553 1259 aa4.98□□□□□ -1.61
TRAV15-201ENST00000556680 RNASE9P60153 205 aaKnown RBP4.98□□□□□ -1.61
TRAV15-201ENST00000556680 DHX8Q14562 1220 aaKnown RBP4.98□□□□□ -1.61
TRAV15-201ENST00000556680 FAM83BQ5T0W9 1011 aa4.98□□□□□ -1.61
TRAV15-201ENST00000556680 DCAF12L1Q5VU92 463 aa4.98□□□□□ -1.61
TRAV15-201ENST00000556680 MAMDC4Q6UXC1 1216 aa4.98□□□□□ -1.61
TRAV15-201ENST00000556680 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.98□□□□□ -1.61
TRAV15-201ENST00000556680 Q6ZRM9 215 aa4.98□□□□□ -1.61
TRAV15-201ENST00000556680 RHOT2Q8IXI1 618 aa4.98□□□□□ -1.61
TRAV15-201ENST00000556680 YAF2Q8IY57 180 aa4.98□□□□□ -1.61
TRAV15-201ENST00000556680 SYTL1Q8IYJ3 562 aa4.98□□□□□ -1.61
TRAV15-201ENST00000556680 FAM9BQ8IZU0 186 aa4.98□□□□□ -1.61
TRAV15-201ENST00000556680 RNF152Q8N8N0 203 aa4.98□□□□□ -1.61
TRAV15-201ENST00000556680 RAPGEF4Q8WZA2 1011 aa4.98□□□□□ -1.61
TRAV15-201ENST00000556680 SPSB4Q96A44 273 aa4.98□□□□□ -1.61
TRAV15-201ENST00000556680 LOXL4Q96JB6 756 aa4.98□□□□□ -1.61
TRAV15-201ENST00000556680 TRIB1Q96RU8 372 aa4.98□□□□□ -1.61
TRAV15-201ENST00000556680 VKORC1Q9BQB6 163 aa4.98□□□□□ -1.61
TRAV15-201ENST00000556680 KRTAP4-6Q9BYQ5 205 aa4.98□□□□□ -1.61
TRAV15-201ENST00000556680 RNPEPQ9H4A4 650 aa4.98□□□□□ -1.61
TRAV15-201ENST00000556680 PRKRIP1Q9H875 184 aaPredicted RBP4.98□□□□□ -1.61
TRAV15-201ENST00000556680 ZNF212Q9UDV6 495 aa4.98□□□□□ -1.61
TRAV15-201ENST00000556680 MAGED2Q9UNF1 606 aaPredicted RBP4.98□□□□□ -1.61
TRAV15-201ENST00000556680 SORCS3Q9UPU3 1222 aa4.98□□□□□ -1.61
TRAV15-201ENST00000556680 PCDHGB2Q9Y5G2 931 aa4.98□□□□□ -1.61
TRAV15-201ENST00000556680 RAD54BQ9Y620 910 aa4.98□□□□□ -1.61
TRAV15-201ENST00000556680 PLEKHH1Q9ULM0 1364 aa4.98□□□□□ -1.61
TRAV15-201ENST00000556680 NWD1Q149M9 1564 aa4.98□□□□□ -1.61
TRAV15-201ENST00000556680 CDC42BPGQ6DT37 1551 aa4.98□□□□□ -1.61
TRAV15-201ENST00000556680 SHPRHQ149N8 1683 aa4.98□□□□□ -1.61
TRAV15-201ENST00000556680 KIF1AQ12756 1690 aa4.97□□□□□ -1.61
TRAV15-201ENST00000556680 AATKQ6ZMQ8 1374 aa4.97□□□□□ -1.61
TRAV15-201ENST00000556680 MBD3L4A6NDZ8 208 aaPredicted RBP4.97□□□□□ -1.61
TRAV15-201ENST00000556680 MBD3L3A6NE82 208 aaPredicted RBP4.97□□□□□ -1.61
TRAV15-201ENST00000556680 DIRC3C9JPN6 131 aa4.97□□□□□ -1.61
TRAV15-201ENST00000556680 SCAF4O95104 1147 aaKnown RBP4.97□□□□□ -1.61
TRAV15-201ENST00000556680 GPANK1O95872 356 aa4.97□□□□□ -1.61
TRAV15-201ENST00000556680 FOSP01100 380 aaPredicted RBP4.97□□□□□ -1.61
TRAV15-201ENST00000556680 ITGB3P05106 788 aa4.97□□□□□ -1.61
TRAV15-201ENST00000556680 SPATA31D3P0C874 917 aa4.97□□□□□ -1.61
TRAV15-201ENST00000556680 FGFR2P21802 821 aa4.97□□□□□ -1.61
TRAV15-201ENST00000556680 KLRC1P26715 233 aa4.97□□□□□ -1.61
TRAV15-201ENST00000556680 CARSP49589 748 aaKnown RBP4.97□□□□□ -1.61
TRAV15-201ENST00000556680 SCNN1GP51170 649 aa4.97□□□□□ -1.61
TRAV15-201ENST00000556680 TNFAIP2Q03169 654 aa4.97□□□□□ -1.61
TRAV15-201ENST00000556680 SLFN5Q08AF3 891 aa4.97□□□□□ -1.61
TRAV15-201ENST00000556680 PMS2P11Q13670 270 aa4.97□□□□□ -1.61
TRAV15-201ENST00000556680 TRIM14Q14142 442 aa4.97□□□□□ -1.61
TRAV15-201ENST00000556680 IQCB1Q15051 598 aa4.97□□□□□ -1.61
TRAV15-201ENST00000556680 FAM102AQ5T9C2 384 aaPredicted RBP4.97□□□□□ -1.61
TRAV15-201ENST00000556680 AGAP9Q5VTM2 703 aa4.97□□□□□ -1.61
TRAV15-201ENST00000556680 C1QL3Q5VWW1 255 aa4.97□□□□□ -1.61
TRAV15-201ENST00000556680 NAIF1Q69YI7 327 aaPredicted RBP4.97□□□□□ -1.61
TRAV15-201ENST00000556680 LAYNQ6UX15 382 aa4.97□□□□□ -1.61
TRAV15-201ENST00000556680 Q6ZSN1 163 aa4.97□□□□□ -1.61
TRAV15-201ENST00000556680 SPATA31D4Q6ZUB0 917 aa4.97□□□□□ -1.61
TRAV15-201ENST00000556680 CCDC150Q8NCX0 1101 aa4.97□□□□□ -1.61
TRAV15-201ENST00000556680 CHST13Q8NET6 341 aa4.97□□□□□ -1.61
TRAV15-201ENST00000556680 OR56A1Q8NGH5 318 aa4.97□□□□□ -1.61
TRAV15-201ENST00000556680 OR56A3Q8NH54 315 aa4.97□□□□□ -1.61
TRAV15-201ENST00000556680 ADOQ96SZ5 270 aa4.97□□□□□ -1.61
TRAV15-201ENST00000556680 CRB3Q9BUF7 120 aa4.97□□□□□ -1.61
TRAV15-201ENST00000556680 SPATA5L1Q9BVQ7 753 aa4.97□□□□□ -1.61
TRAV15-201ENST00000556680 CDK19Q9BWU1 502 aa4.97□□□□□ -1.61
TRAV15-201ENST00000556680 SSBP3Q9BWW4 388 aaPredicted RBP4.97□□□□□ -1.61
TRAV15-201ENST00000556680 TTYH3Q9C0H2 523 aa4.97□□□□□ -1.61
TRAV15-201ENST00000556680 WDR12Q9GZL7 423 aaKnown RBP4.97□□□□□ -1.61
TRAV15-201ENST00000556680 CHST8Q9H2A9 424 aa4.97□□□□□ -1.61
TRAV15-201ENST00000556680 GJB4Q9NTQ9 266 aa4.97□□□□□ -1.61
TRAV15-201ENST00000556680 TRPM5Q9NZQ8 1165 aa4.97□□□□□ -1.61
TRAV15-201ENST00000556680 RNF181Q9P0P0 153 aa4.97□□□□□ -1.61
TRAV15-201ENST00000556680 MTO1Q9Y2Z2 717 aaKnown RBP4.97□□□□□ -1.61
TRAV15-201ENST00000556680 TCAF1Q9Y4C2 921 aa4.97□□□□□ -1.61
TRAV15-201ENST00000556680 TECPR2O15040 1411 aa4.97□□□□□ -1.61
TRAV15-201ENST00000556680 FAM135BQ49AJ0 1406 aa4.97□□□□□ -1.61
TRAV15-201ENST00000556680 PPIP5K1Q6PFW1 1433 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms