RNA–Protein interactions for RNA: ENST00000556461.1

VTI1B-206, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-206ENST00000556461 DUSP9Q99956 384 aaKnown RBP8.65□□□□□ -1.02
VTI1B-206ENST00000556461 DDX23Q9BUQ8 820 aaKnown RBP8.65□□□□□ -1.02
VTI1B-206ENST00000556461 TRMT61BQ9BVS5 477 aaKnown RBP8.65□□□□□ -1.02
VTI1B-206ENST00000556461 KCNH6Q9H252 994 aa8.65□□□□□ -1.02
VTI1B-206ENST00000556461 CHMP5Q9NZZ3 219 aa8.65□□□□□ -1.02
VTI1B-206ENST00000556461 DLGAP2Q9P1A6 1054 aa8.65□□□□□ -1.02
VTI1B-206ENST00000556461 CCL26Q9Y258 94 aa8.65□□□□□ -1.02
VTI1B-206ENST00000556461 F8VP50 259 aa8.64□□□□□ -1.03
VTI1B-206ENST00000556461 H0Y858 1186 aa8.64□□□□□ -1.03
VTI1B-206ENST00000556461 CETN3O15182 167 aa8.64□□□□□ -1.03
VTI1B-206ENST00000556461 FGF19O95750 216 aa8.64□□□□□ -1.03
VTI1B-206ENST00000556461 KRT13P13646 458 aa8.64□□□□□ -1.03
VTI1B-206ENST00000556461 CCNE1P24864 410 aa8.64□□□□□ -1.03
VTI1B-206ENST00000556461 GRIK1P39086 918 aa8.64□□□□□ -1.03
VTI1B-206ENST00000556461 SOX9P48436 509 aa8.64□□□□□ -1.03
VTI1B-206ENST00000556461 NDST1P52848 882 aa8.64□□□□□ -1.03
VTI1B-206ENST00000556461 CBWD6Q4V339 395 aa8.64□□□□□ -1.03
VTI1B-206ENST00000556461 ARHGAP15Q53QZ3 475 aa8.64□□□□□ -1.03
VTI1B-206ENST00000556461 CBWD3Q5JTY5 395 aa8.64□□□□□ -1.03
VTI1B-206ENST00000556461 CBWD5Q5RIA9 395 aa8.64□□□□□ -1.03
VTI1B-206ENST00000556461 VSTM1Q6UX27 236 aa8.64□□□□□ -1.03
VTI1B-206ENST00000556461 TPRG1Q6ZUI0 275 aa8.64□□□□□ -1.03
VTI1B-206ENST00000556461 ACOT1Q86TX2 421 aa8.64□□□□□ -1.03
VTI1B-206ENST00000556461 CCDC105Q8IYK2 499 aa8.64□□□□□ -1.03
VTI1B-206ENST00000556461 ZNF687Q8N1G0 1237 aa8.64□□□□□ -1.03
VTI1B-206ENST00000556461 DTWD2Q8NBA8 298 aa8.64□□□□□ -1.03
VTI1B-206ENST00000556461 TTC8Q8TAM2 541 aa8.64□□□□□ -1.03
VTI1B-206ENST00000556461 DEPDC1BQ8WUY9 529 aa8.64□□□□□ -1.03
VTI1B-206ENST00000556461 USP13Q92995 863 aaPredicted RBP8.64□□□□□ -1.03
VTI1B-206ENST00000556461 TRMT2BQ96GJ1 504 aaKnown RBP8.64□□□□□ -1.03
VTI1B-206ENST00000556461 MYRFLQ96LU7 910 aa8.64□□□□□ -1.03
VTI1B-206ENST00000556461 GCNAQ96QF7 691 aa8.64□□□□□ -1.03
VTI1B-206ENST00000556461 GPR88Q9GZN0 384 aa8.64□□□□□ -1.03
VTI1B-206ENST00000556461 BRD9Q9H8M2 597 aa8.64□□□□□ -1.03
VTI1B-206ENST00000556461 TMEM8AQ9HCN3 771 aa8.64□□□□□ -1.03
VTI1B-206ENST00000556461 COL4A2P08572 1712 aa8.63□□□□□ -1.03
VTI1B-206ENST00000556461 KANSL1LA0AUZ9 987 aa8.63□□□□□ -1.03
VTI1B-206ENST00000556461 C2orf78A6NCI8 922 aa8.63□□□□□ -1.03
VTI1B-206ENST00000556461 FAM170BA6NMN3 283 aa8.63□□□□□ -1.03
VTI1B-206ENST00000556461 ZNF263O14978 683 aa8.63□□□□□ -1.03
VTI1B-206ENST00000556461 BEST1O76090 585 aa8.63□□□□□ -1.03
VTI1B-206ENST00000556461 EPB41P11171 864 aaKnown RBP8.63□□□□□ -1.03
VTI1B-206ENST00000556461 CCDC130P13994 396 aa8.63□□□□□ -1.03
VTI1B-206ENST00000556461 RFX1P22670 979 aa8.63□□□□□ -1.03
VTI1B-206ENST00000556461 TARSP26639 723 aaKnown RBP8.63□□□□□ -1.03
VTI1B-206ENST00000556461 WEE1P30291 646 aa8.63□□□□□ -1.03
VTI1B-206ENST00000556461 PTPN5P54829 565 aa8.63□□□□□ -1.03
VTI1B-206ENST00000556461 STX17P56962 302 aa8.63□□□□□ -1.03
VTI1B-206ENST00000556461 UBE2HP62256 183 aa8.63□□□□□ -1.03
VTI1B-206ENST00000556461 NOP14P78316 857 aaKnown RBP8.63□□□□□ -1.03
VTI1B-206ENST00000556461 PFKPQ01813 784 aa8.63□□□□□ -1.03
VTI1B-206ENST00000556461 PRKCQQ04759 706 aa8.63□□□□□ -1.03
VTI1B-206ENST00000556461 ENPEPQ07075 957 aa8.63□□□□□ -1.03
VTI1B-206ENST00000556461 TNK2Q07912 1038 aa8.63□□□□□ -1.03
VTI1B-206ENST00000556461 FCHO2Q0JRZ9 810 aa8.63□□□□□ -1.03
VTI1B-206ENST00000556461 FZD5Q13467 585 aa8.63□□□□□ -1.03
VTI1B-206ENST00000556461 UBXN2BQ14CS0 331 aa8.63□□□□□ -1.03
VTI1B-206ENST00000556461 MAPRE1Q15691 268 aaKnown RBP8.63□□□□□ -1.03
VTI1B-206ENST00000556461 CAMK4Q16566 473 aa8.63□□□□□ -1.03
VTI1B-206ENST00000556461 DCAF17Q5H9S7 520 aaPredicted RBP8.63□□□□□ -1.03
VTI1B-206ENST00000556461 WDR44Q5JSH3 913 aa8.63□□□□□ -1.03
VTI1B-206ENST00000556461 KLHL10Q6JEL2 608 aa8.63□□□□□ -1.03
VTI1B-206ENST00000556461 TTI2Q6NXR4 508 aa8.63□□□□□ -1.03
VTI1B-206ENST00000556461 DENND5BQ6ZUT9 1274 aa8.63□□□□□ -1.03
VTI1B-206ENST00000556461 FAM35AQ86V20 835 aa8.63□□□□□ -1.03
VTI1B-206ENST00000556461 MON1AQ86VX9 555 aa8.63□□□□□ -1.03
VTI1B-206ENST00000556461 CMTM8Q8IZV2 173 aa8.63□□□□□ -1.03
VTI1B-206ENST00000556461 FUKQ8N0W3 1084 aa8.63□□□□□ -1.03
VTI1B-206ENST00000556461 C12orf29Q8N999 325 aa8.63□□□□□ -1.03
VTI1B-206ENST00000556461 ZMIZ2Q8NF64 920 aa8.63□□□□□ -1.03
VTI1B-206ENST00000556461 PJA1Q8NG27 643 aa8.63□□□□□ -1.03
VTI1B-206ENST00000556461 WHAMMQ8TF30 809 aa8.63□□□□□ -1.03
VTI1B-206ENST00000556461 TAF4BQ92750 862 aa8.63□□□□□ -1.03
VTI1B-206ENST00000556461 DNASE1L2Q92874 299 aa8.63□□□□□ -1.03
VTI1B-206ENST00000556461 IRF7Q92985 503 aa8.63□□□□□ -1.03
VTI1B-206ENST00000556461 TATDN2Q93075 761 aa8.63□□□□□ -1.03
VTI1B-206ENST00000556461 SPATA17Q96L03 361 aa8.63□□□□□ -1.03
VTI1B-206ENST00000556461 C8orf48Q96LL4 319 aa8.63□□□□□ -1.03
VTI1B-206ENST00000556461 CYP2S1Q96SQ9 504 aa8.63□□□□□ -1.03
VTI1B-206ENST00000556461 KCNK16Q96T55 309 aa8.63□□□□□ -1.03
VTI1B-206ENST00000556461 TSG101Q99816 390 aa8.63□□□□□ -1.03
VTI1B-206ENST00000556461 BCO2Q9BYV7 579 aa8.63□□□□□ -1.03
VTI1B-206ENST00000556461 ELOVL4Q9GZR5 314 aa8.63□□□□□ -1.03
VTI1B-206ENST00000556461 TRPC7Q9HCX4 862 aa8.63□□□□□ -1.03
VTI1B-206ENST00000556461 LTB4R2Q9NPC1 389 aa8.63□□□□□ -1.03
VTI1B-206ENST00000556461 GCNT4Q9P109 453 aa8.63□□□□□ -1.03
VTI1B-206ENST00000556461 HOOK1Q9UJC3 728 aaKnown RBP8.63□□□□□ -1.03
VTI1B-206ENST00000556461 CTNND2Q9UQB3 1225 aa8.63□□□□□ -1.03
VTI1B-206ENST00000556461 SIT1Q9Y3P8 196 aa8.63□□□□□ -1.03
VTI1B-206ENST00000556461 PTPRDP23468 1912 aa8.62□□□□□ -1.03
VTI1B-206ENST00000556461 OTOL1A6NHN0 477 aaPredicted RBP8.62□□□□□ -1.03
VTI1B-206ENST00000556461 DPYSL4O14531 572 aa8.62□□□□□ -1.03
VTI1B-206ENST00000556461 TNFRSF10BO14763 440 aa8.62□□□□□ -1.03
VTI1B-206ENST00000556461 TRIM66O15016 1216 aa8.62□□□□□ -1.03
VTI1B-206ENST00000556461 CHADO15335 359 aa8.62□□□□□ -1.03
VTI1B-206ENST00000556461 SLC16A3O15427 465 aaKnown RBP8.62□□□□□ -1.03
VTI1B-206ENST00000556461 CD58P19256 250 aa8.62□□□□□ -1.03
VTI1B-206ENST00000556461 DDX6P26196 483 aaKnown RBP eCLIP8.62□□□□□ -1.035e-9■□□□□ 8.9
VTI1B-206ENST00000556461 ANXA13P27216 316 aa8.62□□□□□ -1.03
VTI1B-206ENST00000556461 GTF2H1P32780 548 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms